EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPMAG00000003271 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 21610 bases
Position: chrGL477460:238964-260573
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003574	RNB	PF00773.19	1.2e-57	1	2
ENSPMAP00000003574	RNB	PF00773.19	1.2e-57	2	2
ENSPMAP00000003572	RNB	PF00773.19	1.2e-57	1	2
ENSPMAP00000003572	RNB	PF00773.19	1.2e-57	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003589	-	2082	-	ENSPMAP00000003574	694 (aa)	-	S4REE2
ENSPMAT00000003587	-	2088	-	ENSPMAP00000003572	696 (aa)	-	S4REE0

Gene Model

Click here to download ENSPMAG00000003271's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003271's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000003271	-	80	62.852	ENSPMAG00000008878	-	100	64.081
ENSPMAG00000003271	-	56	61.307	ENSPMAG00000001512	-	99	61.893
ENSPMAG00000003271	-	53	78.976	ENSPMAG00000004031	-	100	78.976
ENSPMAG00000003271	-	100	75.106	ENSPMAG00000009046	-	100	75.106
ENSPMAG00000003271	-	53	72.081	ENSPMAG00000009004	-	100	72.081
ENSPMAG00000003271	-	94	77.827	ENSPMAG00000006386	-	82	78.056
ENSPMAG00000003271	-	83	96.694	ENSPMAG00000009446	-	94	96.639
ENSPMAG00000003271	-	86	69.663	ENSPMAG00000002800	-	99	69.663
ENSPMAG00000003271	-	85	77.311	ENSPMAG00000003590	-	100	78.003
ENSPMAG00000003271	-	60	91.129	ENSPMAG00000000743	-	99	91.129
ENSPMAG00000003271	-	64	77.506	ENSPMAG00000008914	-	96	77.679
ENSPMAG00000003271	-	82	93.293	ENSPMAG00000007105	-	74	93.293
ENSPMAG00000003271	-	99	30.346	ENSPMAG00000007299	dis3l	72	30.446