EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003340 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 1996 bases
Position: chrGL479009:39189-41184
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003635	ResIII	PF04851.15	1.8e-19	1	1
ENSPMAP00000003635	DEAD	PF00270.29	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003651	-	816	-	ENSPMAP00000003635	272 (aa)	-	S4REK3

Gene Model

Click here to download ENSPMAG00000003340's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003340's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003340	-	99	50.314	ENSAPOG00000014274	-	72	49.842	Acanthochromis_polyacanthus
ENSPMAG00000003340	-	66	66.480	ENSAOCG00000005964	-	68	66.480	Amphiprion_ocellaris
ENSPMAG00000003340	-	66	66.480	ENSAPEG00000018344	-	68	66.480	Amphiprion_percula
ENSPMAG00000003340	-	100	56.618	ENSBTAG00000002612	FANCM	69	56.522	Bos_taurus
ENSPMAG00000003340	-	66	63.536	ENSCING00000002994	-	66	63.536	Ciona_intestinalis
ENSPMAG00000003340	-	65	65.730	ENSDARG00000112136	CABZ01079748.1	60	65.730	Danio_rerio
ENSPMAG00000003340	-	98	57.993	ENSEBUG00000014849	-	70	56.777	Eptatretus_burgeri
ENSPMAG00000003340	-	100	51.111	ENSGAFG00000002104	-	70	69.832	Gambusia_affinis
ENSPMAG00000003340	-	97	53.208	ENSGAGG00000007068	-	66	54.340	Gopherus_agassizii
ENSPMAG00000003340	-	100	50.662	ENSIPUG00000014629	fancm	75	49.007	Ictalurus_punctatus
ENSPMAG00000003340	-	98	48.718	ENSMALG00000013187	-	72	48.718	Monopterus_albus
ENSPMAG00000003340	-	64	66.092	ENSNBRG00000024095	-	68	66.092	Neolamprologus_brichardi
ENSPMAG00000003340	-	97	53.199	ENSPKIG00000000861	-	68	51.515	Paramormyrops_kingsleyae
ENSPMAG00000003340	-	64	67.816	ENSPMGG00000010830	-	69	67.816	Periophthalmus_magnuspinnatus
ENSPMAG00000003340	-	64	66.092	ENSPNYG00000018775	-	68	66.092	Pundamilia_nyererei
ENSPMAG00000003340	-	64	68.391	ENSSFOG00015017948	-	70	68.391	Scleropages_formosus
ENSPMAG00000003340	-	100	53.676	ENSSDUG00000016682	-	67	52.941	Seriola_dumerili
ENSPMAG00000003340	-	100	55.882	ENSSPAG00000016930	-	82	51.133	Stegastes_partitus
ENSPMAG00000003340	-	100	52.941	ENSXETG00000003046	fancm	53	56.250	Xenopus_tropicalis
ENSPMAG00000003340	-	71	64.179	ENSXCOG00000004854	-	63	64.179	Xiphophorus_couchianus