EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003433 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.2
Alias: -
Full Name: RNA binding motif protein 4.2
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 2214 bases
Position: chrGL478707:27428-29641
Accession: ZDB-GENE-030131-3019
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003736	zf-CCHC	PF00098.23	1.9e-07	1	1
ENSPMAP00000003736	RRM_5	PF13893.6	5.6e-07	1	1
ENSPMAP00000003736	RRM_1	PF00076.22	3.7e-33	1	2
ENSPMAP00000003736	RRM_1	PF00076.22	3.7e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003752	-	639	-	ENSPMAP00000003736	213 (aa)	-	S4REV4

Gene Model

Click here to download ENSPMAG00000003433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003433's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003433	rbm4.2	70	55.000	ENSAPOG00000012375	-	96	55.000	Acanthochromis_polyacanthus
ENSPMAG00000003433	rbm4.2	70	57.143	ENSACIG00000016472	-	85	57.143	Amphilophus_citrinellus
ENSPMAG00000003433	rbm4.2	77	55.714	ENSAOCG00000010907	-	96	55.714	Amphiprion_ocellaris
ENSPMAG00000003433	rbm4.2	77	55.319	ENSAPEG00000009476	-	88	55.319	Amphiprion_percula
ENSPMAG00000003433	rbm4.2	70	55.147	ENSATEG00000001912	-	89	55.147	Anabas_testudineus
ENSPMAG00000003433	rbm4.2	86	53.285	ENSAMXG00000032121	rbm4.2	86	53.285	Astyanax_mexicanus
ENSPMAG00000003433	rbm4.2	71	48.684	ENSCPBG00000023666	-	93	48.684	Chrysemys_picta_bellii
ENSPMAG00000003433	rbm4.2	70	54.015	ENSCSEG00000007739	-	98	54.015	Cynoglossus_semilaevis
ENSPMAG00000003433	rbm4.2	71	47.368	ENSDARG00000044545	zgc:77262	50	40.000	Danio_rerio
ENSPMAG00000003433	rbm4.2	98	49.533	ENSDARG00000055080	rbm4.2	57	50.000	Danio_rerio
ENSPMAG00000003433	rbm4.2	84	54.190	ENSDARG00000036386	rbm4.1	79	54.015	Danio_rerio
ENSPMAG00000003433	rbm4.2	83	65.746	ENSEBUG00000007174	-	97	61.494	Eptatretus_burgeri
ENSPMAG00000003433	rbm4.2	84	66.484	ENSEBUG00000008142	-	50	66.484	Eptatretus_burgeri
ENSPMAG00000003433	rbm4.2	71	50.331	ENSFHEG00000003483	-	97	50.331	Fundulus_heteroclitus
ENSPMAG00000003433	rbm4.2	69	49.635	ENSGAFG00000019301	-	90	49.635	Gambusia_affinis
ENSPMAG00000003433	rbm4.2	84	52.514	ENSGACG00000000822	rbm4.1	53	52.514	Gasterosteus_aculeatus
ENSPMAG00000003433	rbm4.2	71	48.649	ENSGAGG00000014558	-	93	48.649	Gopherus_agassizii
ENSPMAG00000003433	rbm4.2	69	56.835	ENSHBUG00000011624	-	90	56.835	Haplochromis_burtoni
ENSPMAG00000003433	rbm4.2	69	52.555	ENSHCOG00000011413	-	81	52.555	Hippocampus_comes
ENSPMAG00000003433	rbm4.2	95	51.244	ENSIPUG00000022937	rbm4.2	57	50.230	Ictalurus_punctatus
ENSPMAG00000003433	rbm4.2	82	55.172	ENSLBEG00000019756	-	83	54.015	Labrus_bergylta
ENSPMAG00000003433	rbm4.2	74	45.223	ENSLACG00000006343	zgc:77262	53	45.223	Latimeria_chalumnae
ENSPMAG00000003433	rbm4.2	70	50.360	ENSLOCG00000002772	rbm4.1	93	50.360	Lepisosteus_oculatus
ENSPMAG00000003433	rbm4.2	92	52.941	ENSMAMG00000001760	-	53	52.941	Mastacembelus_armatus
ENSPMAG00000003433	rbm4.2	66	52.518	ENSMZEG00005009210	-	77	52.518	Maylandia_zebra
ENSPMAG00000003433	rbm4.2	70	40.000	ENSMZEG00005028161	-	77	40.000	Maylandia_zebra
ENSPMAG00000003433	rbm4.2	70	56.618	ENSMZEG00005028160	-	93	56.618	Maylandia_zebra
ENSPMAG00000003433	rbm4.2	77	53.285	ENSMMOG00000020484	-	86	53.285	Mola_mola
ENSPMAG00000003433	rbm4.2	69	56.115	ENSNBRG00000017763	-	90	56.115	Neolamprologus_brichardi
ENSPMAG00000003433	rbm4.2	84	53.631	ENSPKIG00000020805	rbm4.1	86	53.285	Paramormyrops_kingsleyae
ENSPMAG00000003433	rbm4.2	71	55.474	ENSPMGG00000004331	rbm4.1	97	55.474	Periophthalmus_magnuspinnatus
ENSPMAG00000003433	rbm4.2	73	51.095	ENSPLAG00000018569	-	87	51.095	Poecilia_latipinna
ENSPMAG00000003433	rbm4.2	73	51.095	ENSPMEG00000006278	-	87	51.095	Poecilia_mexicana
ENSPMAG00000003433	rbm4.2	82	53.448	ENSPREG00000003764	-	51	53.448	Poecilia_reticulata
ENSPMAG00000003433	rbm4.2	69	56.835	ENSPNYG00000004649	-	90	56.835	Pundamilia_nyererei
ENSPMAG00000003433	rbm4.2	73	45.570	ENSSFOG00015018567	zgc:77262	87	45.570	Scleropages_formosus
ENSPMAG00000003433	rbm4.2	69	52.857	ENSSMAG00000007575	-	90	52.857	Scophthalmus_maximus
ENSPMAG00000003433	rbm4.2	94	53.465	ENSSPAG00000019046	-	53	53.465	Stegastes_partitus
ENSPMAG00000003433	rbm4.2	84	53.073	ENSTNIG00000004821	rbm4.1	54	53.073	Tetraodon_nigroviridis
ENSPMAG00000003433	rbm4.2	95	51.707	ENSXETG00000026649	rbm4b	60	51.707	Xenopus_tropicalis
ENSPMAG00000003433	rbm4.2	71	48.344	ENSXCOG00000003730	-	91	48.344	Xiphophorus_couchianus
ENSPMAG00000003433	rbm4.2	82	52.874	ENSXMAG00000008059	-	59	45.673	Xiphophorus_maculatus