EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000003516 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 21014 bases
Position: chrGL476360:33451-54464
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003851	ResIII	PF04851.15	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003867	-	3033	-	ENSPMAP00000003851	1010 (aa)	-	S4RF69

Gene Model

Click here to download ENSPMAG00000003516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003516's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000003516	smarcad1a	53	37.063	ENSPMAG00000004376	hells	68	37.063
ENSPMAG00000003516	smarcad1a	50	36.884	ENSPMAG00000008026	SMARCA5	70	36.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003516	smarcad1a	99	47.003	ENSG00000163104	SMARCAD1	99	59.701	Homo_sapiens
ENSPMAG00000003516	smarcad1a	95	56.734	ENSAPOG00000011446	smarcad1a	97	55.055	Acanthochromis_polyacanthus
ENSPMAG00000003516	smarcad1a	99	47.488	ENSAMEG00000005844	SMARCAD1	84	51.806	Ailuropoda_melanoleuca
ENSPMAG00000003516	smarcad1a	69	61.308	ENSACIG00000018326	smarcad1a	99	61.308	Amphilophus_citrinellus
ENSPMAG00000003516	smarcad1a	95	56.877	ENSAOCG00000019762	smarcad1a	96	55.556	Amphiprion_ocellaris
ENSPMAG00000003516	smarcad1a	99	57.020	ENSAPEG00000003889	smarcad1a	96	55.556	Amphiprion_percula
ENSPMAG00000003516	smarcad1a	84	56.294	ENSATEG00000015608	smarcad1a	82	56.714	Anabas_testudineus
ENSPMAG00000003516	smarcad1a	87	51.299	ENSAPLG00000004630	SMARCAD1	90	51.302	Anas_platyrhynchos
ENSPMAG00000003516	smarcad1a	99	45.548	ENSACAG00000013554	SMARCAD1	84	50.337	Anolis_carolinensis
ENSPMAG00000003516	smarcad1a	99	46.768	ENSANAG00000020488	SMARCAD1	95	51.242	Aotus_nancymaae
ENSPMAG00000003516	smarcad1a	94	57.413	ENSACLG00000017063	smarcad1a	93	57.413	Astatotilapia_calliptera
ENSPMAG00000003516	smarcad1a	71	52.712	ENSAMXG00000015470	smarcad1a	98	52.712	Astyanax_mexicanus
ENSPMAG00000003516	smarcad1a	80	51.199	ENSAMXG00000019130	smarcad1b	88	51.671	Astyanax_mexicanus
ENSPMAG00000003516	smarcad1a	99	47.059	ENSBTAG00000017061	SMARCAD1	84	51.635	Bos_taurus
ENSPMAG00000003516	smarcad1a	65	39.673	WBGene00010845	M03C11.8	72	38.140	Caenorhabditis_elegans
ENSPMAG00000003516	smarcad1a	99	46.806	ENSCJAG00000006778	SMARCAD1	99	46.422	Callithrix_jacchus
ENSPMAG00000003516	smarcad1a	99	47.288	ENSCAFG00000010026	SMARCAD1	99	47.228	Canis_familiaris
ENSPMAG00000003516	smarcad1a	87	51.977	ENSCAFG00020003994	SMARCAD1	97	51.864	Canis_lupus_dingo
ENSPMAG00000003516	smarcad1a	99	46.774	ENSCHIG00000012905	SMARCAD1	84	51.409	Capra_hircus
ENSPMAG00000003516	smarcad1a	99	47.243	ENSTSYG00000002706	SMARCAD1	84	51.751	Carlito_syrichta
ENSPMAG00000003516	smarcad1a	88	44.027	ENSCAPG00000016744	SMARCAD1	89	46.007	Cavia_aperea
ENSPMAG00000003516	smarcad1a	99	47.220	ENSCPOG00000011398	SMARCAD1	99	46.937	Cavia_porcellus
ENSPMAG00000003516	smarcad1a	99	46.952	ENSCCAG00000022264	SMARCAD1	99	59.701	Cebus_capucinus
ENSPMAG00000003516	smarcad1a	99	47.098	ENSCATG00000035663	SMARCAD1	97	51.412	Cercocebus_atys
ENSPMAG00000003516	smarcad1a	84	51.572	ENSCSAG00000004186	SMARCAD1	99	51.455	Chlorocebus_sabaeus
ENSPMAG00000003516	smarcad1a	99	47.109	ENSCPBG00000013203	SMARCAD1	100	46.713	Chrysemys_picta_bellii
ENSPMAG00000003516	smarcad1a	64	48.452	ENSCING00000001688	-	97	48.452	Ciona_intestinalis
ENSPMAG00000003516	smarcad1a	99	46.952	ENSCANG00000003556	SMARCAD1	99	59.701	Colobus_angolensis_palliatus
ENSPMAG00000003516	smarcad1a	99	47.560	ENSCGRG00001015056	Smarcad1	99	47.009	Cricetulus_griseus_chok1gshd
ENSPMAG00000003516	smarcad1a	99	47.560	ENSCGRG00000014087	Smarcad1	99	47.009	Cricetulus_griseus_crigri
ENSPMAG00000003516	smarcad1a	93	54.801	ENSCSEG00000014419	-	91	52.103	Cynoglossus_semilaevis
ENSPMAG00000003516	smarcad1a	97	53.138	ENSCSEG00000017903	smarcad1a	80	53.138	Cynoglossus_semilaevis
ENSPMAG00000003516	smarcad1a	83	49.703	ENSDARG00000073721	smarcad1b	86	49.302	Danio_rerio
ENSPMAG00000003516	smarcad1a	89	47.470	ENSDARG00000014041	smarcad1a	91	48.458	Danio_rerio
ENSPMAG00000003516	smarcad1a	99	46.516	ENSDNOG00000000806	-	99	46.798	Dasypus_novemcinctus
ENSPMAG00000003516	smarcad1a	99	47.574	ENSDORG00000012331	Smarcad1	99	47.574	Dipodomys_ordii
ENSPMAG00000003516	smarcad1a	78	37.282	FBgn0032157	Etl1	89	38.155	Drosophila_melanogaster
ENSPMAG00000003516	smarcad1a	64	49.388	ENSEBUG00000003969	smarcad1a	98	48.442	Eptatretus_burgeri
ENSPMAG00000003516	smarcad1a	99	47.388	ENSEASG00005012382	SMARCAD1	84	51.806	Equus_asinus_asinus
ENSPMAG00000003516	smarcad1a	99	47.388	ENSECAG00000011562	SMARCAD1	84	51.806	Equus_caballus
ENSPMAG00000003516	smarcad1a	79	50.122	ENSELUG00000019154	smarcad1b	86	48.059	Esox_lucius
ENSPMAG00000003516	smarcad1a	99	46.466	ENSELUG00000018535	smarcad1a	89	50.651	Esox_lucius
ENSPMAG00000003516	smarcad1a	99	47.283	ENSFCAG00000003958	SMARCAD1	99	60.033	Felis_catus
ENSPMAG00000003516	smarcad1a	99	46.319	ENSFALG00000006089	SMARCAD1	99	45.463	Ficedula_albicollis
ENSPMAG00000003516	smarcad1a	99	47.098	ENSFDAG00000017027	SMARCAD1	99	47.003	Fukomys_damarensis
ENSPMAG00000003516	smarcad1a	99	55.930	ENSFHEG00000012778	smarcad1a	96	53.825	Fundulus_heteroclitus
ENSPMAG00000003516	smarcad1a	87	49.602	ENSGMOG00000018995	smarcad1a	97	49.379	Gadus_morhua
ENSPMAG00000003516	smarcad1a	78	51.375	ENSGALG00000037339	SMARCAD1	93	51.250	Gallus_gallus
ENSPMAG00000003516	smarcad1a	89	58.529	ENSGAFG00000013498	smarcad1a	82	58.529	Gambusia_affinis
ENSPMAG00000003516	smarcad1a	88	51.222	ENSGACG00000007327	smarcad1a	99	51.222	Gasterosteus_aculeatus
ENSPMAG00000003516	smarcad1a	99	46.919	ENSGAGG00000008582	SMARCAD1	99	46.825	Gopherus_agassizii
ENSPMAG00000003516	smarcad1a	99	47.003	ENSGGOG00000023001	SMARCAD1	99	46.635	Gorilla_gorilla
ENSPMAG00000003516	smarcad1a	95	56.714	ENSHBUG00000011042	smarcad1a	94	56.714	Haplochromis_burtoni
ENSPMAG00000003516	smarcad1a	99	47.533	ENSHGLG00000005070	SMARCAD1	99	46.937	Heterocephalus_glaber_female
ENSPMAG00000003516	smarcad1a	99	47.533	ENSHGLG00100006812	SMARCAD1	99	46.937	Heterocephalus_glaber_male
ENSPMAG00000003516	smarcad1a	99	56.481	ENSHCOG00000007848	smarcad1a	76	53.453	Hippocampus_comes
ENSPMAG00000003516	smarcad1a	98	51.847	ENSIPUG00000000242	smarcad1a	97	46.652	Ictalurus_punctatus
ENSPMAG00000003516	smarcad1a	80	52.063	ENSIPUG00000022817	smarcad1b	87	52.121	Ictalurus_punctatus
ENSPMAG00000003516	smarcad1a	99	47.098	ENSSTOG00000001227	SMARCAD1	99	46.483	Ictidomys_tridecemlineatus
ENSPMAG00000003516	smarcad1a	99	47.053	ENSJJAG00000022342	Smarcad1	99	46.958	Jaculus_jaculus
ENSPMAG00000003516	smarcad1a	80	58.779	ENSKMAG00000021351	smarcad1a	82	58.869	Kryptolebias_marmoratus
ENSPMAG00000003516	smarcad1a	96	55.289	ENSLBEG00000008088	smarcad1a	95	55.289	Labrus_bergylta
ENSPMAG00000003516	smarcad1a	99	47.388	ENSLOCG00000012909	smarcad1a	99	48.922	Lepisosteus_oculatus
ENSPMAG00000003516	smarcad1a	99	46.869	ENSLAFG00000000040	SMARCAD1	84	50.394	Loxodonta_africana
ENSPMAG00000003516	smarcad1a	99	47.193	ENSMFAG00000042606	SMARCAD1	97	51.412	Macaca_fascicularis
ENSPMAG00000003516	smarcad1a	87	51.525	ENSMMUG00000022242	SMARCAD1	97	51.412	Macaca_mulatta
ENSPMAG00000003516	smarcad1a	99	47.193	ENSMNEG00000038117	SMARCAD1	99	59.701	Macaca_nemestrina
ENSPMAG00000003516	smarcad1a	99	47.098	ENSMLEG00000038333	SMARCAD1	99	59.701	Mandrillus_leucophaeus
ENSPMAG00000003516	smarcad1a	97	55.448	ENSMAMG00000000933	smarcad1a	91	55.130	Mastacembelus_armatus
ENSPMAG00000003516	smarcad1a	94	57.413	ENSMZEG00005005203	smarcad1a	99	45.155	Maylandia_zebra
ENSPMAG00000003516	smarcad1a	96	44.970	ENSMGAG00000005577	SMARCAD1	90	47.851	Meleagris_gallopavo
ENSPMAG00000003516	smarcad1a	99	47.897	ENSMAUG00000008417	Smarcad1	99	47.343	Mesocricetus_auratus
ENSPMAG00000003516	smarcad1a	99	47.283	ENSMICG00000009746	SMARCAD1	99	46.964	Microcebus_murinus
ENSPMAG00000003516	smarcad1a	99	46.981	ENSMOCG00000017142	Smarcad1	99	47.009	Microtus_ochrogaster
ENSPMAG00000003516	smarcad1a	78	52.163	ENSMMOG00000000275	smarcad1a	93	55.669	Mola_mola
ENSPMAG00000003516	smarcad1a	99	46.609	ENSMODG00000019268	SMARCAD1	99	46.705	Monodelphis_domestica
ENSPMAG00000003516	smarcad1a	85	52.480	MGP_CAROLIEiJ_G0028458	-	67	52.364	Mus_caroli
ENSPMAG00000003516	smarcad1a	99	47.947	ENSMUSG00000029920	Smarcad1	99	47.443	Mus_musculus
ENSPMAG00000003516	smarcad1a	99	47.755	MGP_PahariEiJ_G0022198	Smarcad1	99	47.408	Mus_pahari
ENSPMAG00000003516	smarcad1a	99	48.088	MGP_SPRETEiJ_G0029462	Smarcad1	99	47.443	Mus_spretus
ENSPMAG00000003516	smarcad1a	99	47.388	ENSMPUG00000002111	SMARCAD1	84	51.806	Mustela_putorius_furo
ENSPMAG00000003516	smarcad1a	99	46.402	ENSMLUG00000000425	SMARCAD1	99	46.402	Myotis_lucifugus
ENSPMAG00000003516	smarcad1a	99	46.925	ENSNGAG00000000810	Smarcad1	99	47.013	Nannospalax_galili
ENSPMAG00000003516	smarcad1a	67	57.016	ENSNBRG00000012749	smarcad1a	82	55.698	Neolamprologus_brichardi
ENSPMAG00000003516	smarcad1a	99	47.003	ENSNLEG00000014225	SMARCAD1	99	59.701	Nomascus_leucogenys
ENSPMAG00000003516	smarcad1a	99	47.871	ENSODEG00000004334	SMARCAD1	99	47.682	Octodon_degus
ENSPMAG00000003516	smarcad1a	64	58.589	ENSONIG00000015059	smarcad1a	99	46.705	Oreochromis_niloticus
ENSPMAG00000003516	smarcad1a	80	53.056	ENSOANG00000013764	SMARCAD1	99	52.844	Ornithorhynchus_anatinus
ENSPMAG00000003516	smarcad1a	99	47.483	ENSOCUG00000017283	SMARCAD1	84	51.751	Oryctolagus_cuniculus
ENSPMAG00000003516	smarcad1a	92	57.635	ENSORLG00000004869	smarcad1a	94	54.189	Oryzias_latipes
ENSPMAG00000003516	smarcad1a	92	57.635	ENSORLG00020020569	smarcad1a	94	54.251	Oryzias_latipes_hni
ENSPMAG00000003516	smarcad1a	92	57.485	ENSORLG00015009045	smarcad1a	94	53.919	Oryzias_latipes_hsok
ENSPMAG00000003516	smarcad1a	92	57.784	ENSOMEG00000023032	smarcad1a	90	48.021	Oryzias_melastigma
ENSPMAG00000003516	smarcad1a	99	46.692	ENSOGAG00000011444	SMARCAD1	99	46.597	Otolemur_garnettii
ENSPMAG00000003516	smarcad1a	99	46.679	ENSOARG00000017851	SMARCAD1	99	46.183	Ovis_aries
ENSPMAG00000003516	smarcad1a	99	47.098	ENSPPAG00000035715	SMARCAD1	99	46.730	Pan_paniscus
ENSPMAG00000003516	smarcad1a	99	47.474	ENSPPRG00000024756	SMARCAD1	99	60.033	Panthera_pardus
ENSPMAG00000003516	smarcad1a	99	47.383	ENSPTIG00000017868	SMARCAD1	99	46.679	Panthera_tigris_altaica
ENSPMAG00000003516	smarcad1a	99	47.003	ENSPTRG00000023126	SMARCAD1	99	59.701	Pan_troglodytes
ENSPMAG00000003516	smarcad1a	99	46.490	ENSPANG00000019757	SMARCAD1	99	46.660	Papio_anubis
ENSPMAG00000003516	smarcad1a	99	46.742	ENSPSIG00000010255	SMARCAD1	99	47.264	Pelodiscus_sinensis
ENSPMAG00000003516	smarcad1a	64	56.135	ENSPMGG00000010735	smarcad1a	98	53.791	Periophthalmus_magnuspinnatus
ENSPMAG00000003516	smarcad1a	99	42.885	ENSPEMG00000001854	Smarcad1	99	42.775	Peromyscus_maniculatus_bairdii
ENSPMAG00000003516	smarcad1a	78	54.013	ENSPCIG00000008137	SMARCAD1	98	54.138	Phascolarctos_cinereus
ENSPMAG00000003516	smarcad1a	81	57.855	ENSPFOG00000019116	smarcad1a	77	55.144	Poecilia_formosa
ENSPMAG00000003516	smarcad1a	85	55.319	ENSPLAG00000000108	smarcad1a	77	54.870	Poecilia_latipinna
ENSPMAG00000003516	smarcad1a	81	57.855	ENSPMEG00000009155	smarcad1a	77	55.144	Poecilia_mexicana
ENSPMAG00000003516	smarcad1a	97	55.446	ENSPREG00000018185	smarcad1a	90	54.707	Poecilia_reticulata
ENSPMAG00000003516	smarcad1a	99	46.724	ENSPPYG00000014935	SMARCAD1	84	51.014	Pongo_abelii
ENSPMAG00000003516	smarcad1a	61	53.772	ENSPCOG00000020478	SMARCAD1	72	53.772	Propithecus_coquereli
ENSPMAG00000003516	smarcad1a	99	45.060	ENSPVAG00000001760	SMARCAD1	84	50.620	Pteropus_vampyrus
ENSPMAG00000003516	smarcad1a	66	57.481	ENSPNYG00000010087	smarcad1a	79	57.481	Pundamilia_nyererei
ENSPMAG00000003516	smarcad1a	80	51.456	ENSPNAG00000010099	smarcad1b	87	50.716	Pygocentrus_nattereri
ENSPMAG00000003516	smarcad1a	99	44.231	ENSPNAG00000001663	smarcad1a	99	44.135	Pygocentrus_nattereri
ENSPMAG00000003516	smarcad1a	99	47.755	ENSRNOG00000006391	Smarcad1	84	52.483	Rattus_norvegicus
ENSPMAG00000003516	smarcad1a	99	47.193	ENSRBIG00000041989	SMARCAD1	99	47.003	Rhinopithecus_bieti
ENSPMAG00000003516	smarcad1a	99	47.193	ENSRROG00000035309	SMARCAD1	99	47.003	Rhinopithecus_roxellana
ENSPMAG00000003516	smarcad1a	99	46.686	ENSSBOG00000032114	SMARCAD1	99	59.701	Saimiri_boliviensis_boliviensis
ENSPMAG00000003516	smarcad1a	99	46.813	ENSSHAG00000001279	SMARCAD1	99	46.717	Sarcophilus_harrisii
ENSPMAG00000003516	smarcad1a	99	46.679	ENSSFOG00015016814	smarcad1b	99	46.987	Scleropages_formosus
ENSPMAG00000003516	smarcad1a	77	50.897	ENSSFOG00015020909	smarcad1a	99	50.702	Scleropages_formosus
ENSPMAG00000003516	smarcad1a	98	55.696	ENSSMAG00000001326	smarcad1a	97	54.484	Scophthalmus_maximus
ENSPMAG00000003516	smarcad1a	70	55.556	ENSSDUG00000022338	smarcad1a	84	55.048	Seriola_dumerili
ENSPMAG00000003516	smarcad1a	95	56.223	ENSSLDG00000024986	smarcad1a	97	54.910	Seriola_lalandi_dorsalis
ENSPMAG00000003516	smarcad1a	59	60.201	ENSSPUG00000004633	SMARCAD1	99	60.201	Sphenodon_punctatus
ENSPMAG00000003516	smarcad1a	95	57.450	ENSSPAG00000001970	smarcad1a	94	57.450	Stegastes_partitus
ENSPMAG00000003516	smarcad1a	99	47.243	ENSSSCG00000009193	SMARCAD1	99	51.977	Sus_scrofa
ENSPMAG00000003516	smarcad1a	78	54.477	ENSTGUG00000003127	SMARCAD1	99	54.340	Taeniopygia_guttata
ENSPMAG00000003516	smarcad1a	87	50.338	ENSTNIG00000017585	smarcad1a	98	49.717	Tetraodon_nigroviridis
ENSPMAG00000003516	smarcad1a	90	62.376	ENSTBEG00000002789	SMARCAD1	90	62.376	Tupaia_belangeri
ENSPMAG00000003516	smarcad1a	87	51.693	ENSTTRG00000000226	SMARCAD1	86	51.806	Tursiops_truncatus
ENSPMAG00000003516	smarcad1a	99	47.483	ENSUAMG00000022262	SMARCAD1	84	51.919	Ursus_americanus
ENSPMAG00000003516	smarcad1a	99	47.628	ENSUMAG00000004549	SMARCAD1	84	51.977	Ursus_maritimus
ENSPMAG00000003516	smarcad1a	99	47.574	ENSVVUG00000007271	SMARCAD1	99	52.432	Vulpes_vulpes
ENSPMAG00000003516	smarcad1a	89	48.116	ENSXETG00000019214	smarcad1	99	49.380	Xenopus_tropicalis
ENSPMAG00000003516	smarcad1a	82	50.841	ENSXCOG00000005232	smarcad1a	83	55.780	Xiphophorus_couchianus
ENSPMAG00000003516	smarcad1a	95	56.894	ENSXMAG00000015350	smarcad1a	87	54.508	Xiphophorus_maculatus