EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003556 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-10f23.2
Alias: -
Full Name: nuclear transcription factor%2C X-box binding 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 13362 bases
Position: chrGL477033:492115-505476
Accession: 7803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003887	R3H	PF01424.22	7.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003903	-	2373	-	ENSPMAP00000003887	790 (aa)	-	S4RFA5

Gene Model

Click here to download ENSPMAG00000003556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003556	si:dkey-10f23.2	100	56.946	ENSG00000086102	NFX1	70	56.946	Homo_sapiens
ENSPMAG00000003556	si:dkey-10f23.2	99	54.831	ENSAPOG00000016671	si:dkey-10f23.2	73	54.831	Acanthochromis_polyacanthus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.696	ENSAMEG00000007472	NFX1	70	56.696	Ailuropoda_melanoleuca
ENSPMAG00000003556	si:dkey-10f23.2	100	54.819	ENSACIG00000021055	si:dkey-10f23.2	74	55.194	Amphilophus_citrinellus
ENSPMAG00000003556	si:dkey-10f23.2	99	54.831	ENSAOCG00000017316	si:dkey-10f23.2	78	54.831	Amphiprion_ocellaris
ENSPMAG00000003556	si:dkey-10f23.2	99	54.831	ENSAPEG00000012401	si:dkey-10f23.2	76	54.831	Amphiprion_percula
ENSPMAG00000003556	si:dkey-10f23.2	94	55.585	ENSATEG00000002080	si:dkey-10f23.2	69	55.762	Anabas_testudineus
ENSPMAG00000003556	si:dkey-10f23.2	99	57.196	ENSAPLG00000005524	NFX1	69	57.054	Anas_platyrhynchos
ENSPMAG00000003556	si:dkey-10f23.2	99	58.354	ENSACAG00000002412	NFX1	70	58.354	Anolis_carolinensis
ENSPMAG00000003556	si:dkey-10f23.2	100	56.250	ENSANAG00000001809	NFX1	70	56.250	Aotus_nancymaae
ENSPMAG00000003556	si:dkey-10f23.2	99	56.211	ENSACLG00000003795	si:dkey-10f23.2	74	56.211	Astatotilapia_calliptera
ENSPMAG00000003556	si:dkey-10f23.2	100	55.388	ENSAMXG00000006963	si:dkey-10f23.2	70	55.388	Astyanax_mexicanus
ENSPMAG00000003556	si:dkey-10f23.2	100	55.890	ENSBTAG00000012385	NFX1	70	55.890	Bos_taurus
ENSPMAG00000003556	si:dkey-10f23.2	96	36.611	WBGene00007048	nfx-1	65	38.045	Caenorhabditis_elegans
ENSPMAG00000003556	si:dkey-10f23.2	100	56.250	ENSCJAG00000008142	NFX1	70	56.250	Callithrix_jacchus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.912	ENSCAFG00000001848	NFX1	70	56.912	Canis_familiaris
ENSPMAG00000003556	si:dkey-10f23.2	100	57.250	ENSCAFG00020015630	NFX1	70	57.250	Canis_lupus_dingo
ENSPMAG00000003556	si:dkey-10f23.2	100	55.764	ENSCHIG00000020037	NFX1	70	55.764	Capra_hircus
ENSPMAG00000003556	si:dkey-10f23.2	100	57.000	ENSTSYG00000004125	NFX1	70	57.000	Carlito_syrichta
ENSPMAG00000003556	si:dkey-10f23.2	100	49.938	ENSCAPG00000005611	NFX1	80	49.938	Cavia_aperea
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSCPOG00000003470	NFX1	70	56.446	Cavia_porcellus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.375	ENSCCAG00000025001	NFX1	70	56.250	Cebus_capucinus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.125	ENSCLAG00000002893	NFX1	69	56.125	Chinchilla_lanigera
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSCSAG00000009971	NFX1	70	56.446	Chlorocebus_sabaeus
ENSPMAG00000003556	si:dkey-10f23.2	95	52.042	ENSCHOG00000009225	NFX1	70	52.000	Choloepus_hoffmanni
ENSPMAG00000003556	si:dkey-10f23.2	100	57.875	ENSCPBG00000017928	NFX1	70	58.839	Chrysemys_picta_bellii
ENSPMAG00000003556	si:dkey-10f23.2	95	44.751	ENSCING00000004746	nf-x-like	65	44.751	Ciona_intestinalis
ENSPMAG00000003556	si:dkey-10f23.2	94	45.335	ENSCSAVG00000005762	-	66	45.335	Ciona_savignyi
ENSPMAG00000003556	si:dkey-10f23.2	100	55.044	ENSCANG00000028364	NFX1	70	55.044	Colobus_angolensis_palliatus
ENSPMAG00000003556	si:dkey-10f23.2	100	52.000	ENSCGRG00001002869	Nfx1	70	52.000	Cricetulus_griseus_chok1gshd
ENSPMAG00000003556	si:dkey-10f23.2	100	56.000	ENSCGRG00000016032	Nfx1	71	56.000	Cricetulus_griseus_crigri
ENSPMAG00000003556	si:dkey-10f23.2	96	54.311	ENSCSEG00000019832	si:dkey-10f23.2	74	54.439	Cynoglossus_semilaevis
ENSPMAG00000003556	si:dkey-10f23.2	99	55.960	ENSCVAG00000010039	si:dkey-10f23.2	73	55.960	Cyprinodon_variegatus
ENSPMAG00000003556	si:dkey-10f23.2	99	56.946	ENSDARG00000105669	NFX1	72	56.946	Danio_rerio
ENSPMAG00000003556	si:dkey-10f23.2	100	54.296	ENSDNOG00000002079	NFX1	71	54.296	Dasypus_novemcinctus
ENSPMAG00000003556	si:dkey-10f23.2	100	46.731	ENSDORG00000001989	Nfx1	69	52.055	Dipodomys_ordii
ENSPMAG00000003556	si:dkey-10f23.2	94	41.733	FBgn0001978	stc	65	42.091	Drosophila_melanogaster
ENSPMAG00000003556	si:dkey-10f23.2	96	66.292	ENSETEG00000001427	NFX1	65	66.292	Echinops_telfairi
ENSPMAG00000003556	si:dkey-10f23.2	100	60.101	ENSEBUG00000006923	si:dkey-10f23.2	62	60.101	Eptatretus_burgeri
ENSPMAG00000003556	si:dkey-10f23.2	100	56.250	ENSEASG00005004230	NFX1	65	56.250	Equus_asinus_asinus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.375	ENSECAG00000021305	NFX1	65	56.375	Equus_caballus
ENSPMAG00000003556	si:dkey-10f23.2	97	66.667	ENSEEUG00000001694	NFX1	64	66.667	Erinaceus_europaeus
ENSPMAG00000003556	si:dkey-10f23.2	99	52.060	ENSELUG00000007422	si:dkey-10f23.2	70	51.750	Esox_lucius
ENSPMAG00000003556	si:dkey-10f23.2	100	56.875	ENSFCAG00000007905	NFX1	70	56.875	Felis_catus
ENSPMAG00000003556	si:dkey-10f23.2	100	57.071	ENSFALG00000013143	NFX1	70	57.071	Ficedula_albicollis
ENSPMAG00000003556	si:dkey-10f23.2	100	56.500	ENSFDAG00000012320	NFX1	71	55.597	Fukomys_damarensis
ENSPMAG00000003556	si:dkey-10f23.2	99	56.211	ENSFHEG00000017330	si:dkey-10f23.2	73	56.211	Fundulus_heteroclitus
ENSPMAG00000003556	si:dkey-10f23.2	94	53.386	ENSGMOG00000006198	si:dkey-10f23.2	99	53.386	Gadus_morhua
ENSPMAG00000003556	si:dkey-10f23.2	99	57.340	ENSGALG00000043724	NFX1	69	57.196	Gallus_gallus
ENSPMAG00000003556	si:dkey-10f23.2	99	55.779	ENSGAFG00000000226	si:dkey-10f23.2	74	55.779	Gambusia_affinis
ENSPMAG00000003556	si:dkey-10f23.2	94	54.316	ENSGACG00000004560	si:dkey-10f23.2	97	54.316	Gasterosteus_aculeatus
ENSPMAG00000003556	si:dkey-10f23.2	100	57.000	ENSGGOG00000006751	NFX1	70	56.946	Gorilla_gorilla
ENSPMAG00000003556	si:dkey-10f23.2	99	56.211	ENSHBUG00000015403	si:dkey-10f23.2	74	56.211	Haplochromis_burtoni
ENSPMAG00000003556	si:dkey-10f23.2	100	56.821	ENSHGLG00000008375	NFX1	70	56.821	Heterocephalus_glaber_female
ENSPMAG00000003556	si:dkey-10f23.2	100	56.821	ENSHGLG00100016433	NFX1	70	56.821	Heterocephalus_glaber_male
ENSPMAG00000003556	si:dkey-10f23.2	99	54.193	ENSHCOG00000001235	si:dkey-10f23.2	77	54.193	Hippocampus_comes
ENSPMAG00000003556	si:dkey-10f23.2	99	55.709	ENSIPUG00000005961	si:dkey-10f23.2	72	55.709	Ictalurus_punctatus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.750	ENSSTOG00000006984	NFX1	70	56.750	Ictidomys_tridecemlineatus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.250	ENSJJAG00000023303	Nfx1	71	56.250	Jaculus_jaculus
ENSPMAG00000003556	si:dkey-10f23.2	99	54.831	ENSKMAG00000016306	si:dkey-10f23.2	73	54.831	Kryptolebias_marmoratus
ENSPMAG00000003556	si:dkey-10f23.2	100	53.914	ENSLBEG00000013253	si:dkey-10f23.2	71	53.914	Labrus_bergylta
ENSPMAG00000003556	si:dkey-10f23.2	100	58.229	ENSLACG00000000769	NFX1	77	58.229	Latimeria_chalumnae
ENSPMAG00000003556	si:dkey-10f23.2	99	57.697	ENSLOCG00000011211	si:dkey-10f23.2	90	57.697	Lepisosteus_oculatus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSMFAG00000038715	NFX1	70	56.446	Macaca_fascicularis
ENSPMAG00000003556	si:dkey-10f23.2	100	56.320	ENSMMUG00000043096	NFX1	70	56.320	Macaca_mulatta
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSMNEG00000036057	NFX1	70	56.446	Macaca_nemestrina
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSMLEG00000040882	NFX1	70	56.446	Mandrillus_leucophaeus
ENSPMAG00000003556	si:dkey-10f23.2	100	54.819	ENSMAMG00000010139	si:dkey-10f23.2	72	54.819	Mastacembelus_armatus
ENSPMAG00000003556	si:dkey-10f23.2	99	55.960	ENSMZEG00005018390	si:dkey-10f23.2	74	55.960	Maylandia_zebra
ENSPMAG00000003556	si:dkey-10f23.2	100	54.500	ENSMICG00000012124	NFX1	70	54.500	Microcebus_murinus
ENSPMAG00000003556	si:dkey-10f23.2	100	55.945	ENSMOCG00000007616	Nfx1	71	55.945	Microtus_ochrogaster
ENSPMAG00000003556	si:dkey-10f23.2	99	53.191	ENSMMOG00000004171	si:dkey-10f23.2	87	53.191	Mola_mola
ENSPMAG00000003556	si:dkey-10f23.2	100	57.572	ENSMODG00000003990	NFX1	70	57.572	Monodelphis_domestica
ENSPMAG00000003556	si:dkey-10f23.2	99	54.329	ENSMALG00000017326	si:dkey-10f23.2	84	54.329	Monopterus_albus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.250	MGP_CAROLIEiJ_G0025904	Nfx1	70	56.320	Mus_caroli
ENSPMAG00000003556	si:dkey-10f23.2	100	56.195	ENSMUSG00000028423	Nfx1	70	56.195	Mus_musculus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.320	MGP_PahariEiJ_G0024027	Nfx1	70	56.320	Mus_pahari
ENSPMAG00000003556	si:dkey-10f23.2	100	56.250	MGP_SPRETEiJ_G0026852	Nfx1	70	56.250	Mus_spretus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.821	ENSMPUG00000004111	NFX1	70	56.821	Mustela_putorius_furo
ENSPMAG00000003556	si:dkey-10f23.2	100	55.237	ENSMLUG00000011069	NFX1	70	55.237	Myotis_lucifugus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.500	ENSNGAG00000005385	Nfx1	71	56.500	Nannospalax_galili
ENSPMAG00000003556	si:dkey-10f23.2	99	56.266	ENSNBRG00000013449	si:dkey-10f23.2	73	56.266	Neolamprologus_brichardi
ENSPMAG00000003556	si:dkey-10f23.2	100	56.320	ENSNLEG00000005096	NFX1	70	56.320	Nomascus_leucogenys
ENSPMAG00000003556	si:dkey-10f23.2	88	63.333	ENSMEUG00000012002	NFX1	62	63.333	Notamacropus_eugenii
ENSPMAG00000003556	si:dkey-10f23.2	99	53.426	ENSOPRG00000009816	NFX1	74	53.426	Ochotona_princeps
ENSPMAG00000003556	si:dkey-10f23.2	100	56.571	ENSODEG00000015229	NFX1	70	56.571	Octodon_degus
ENSPMAG00000003556	si:dkey-10f23.2	96	57.031	ENSONIG00000006192	si:dkey-10f23.2	69	57.199	Oreochromis_niloticus
ENSPMAG00000003556	si:dkey-10f23.2	100	50.249	ENSOANG00000002524	NFX1	71	50.187	Ornithorhynchus_anatinus
ENSPMAG00000003556	si:dkey-10f23.2	100	53.000	ENSOCUG00000008957	NFX1	69	53.000	Oryctolagus_cuniculus
ENSPMAG00000003556	si:dkey-10f23.2	100	54.819	ENSORLG00000026662	si:dkey-10f23.2	79	54.819	Oryzias_latipes
ENSPMAG00000003556	si:dkey-10f23.2	99	55.082	ENSORLG00020000170	si:dkey-10f23.2	79	55.082	Oryzias_latipes_hni
ENSPMAG00000003556	si:dkey-10f23.2	99	54.956	ENSORLG00015008191	si:dkey-10f23.2	74	54.956	Oryzias_latipes_hsok
ENSPMAG00000003556	si:dkey-10f23.2	99	55.597	ENSOMEG00000001814	si:dkey-10f23.2	76	55.597	Oryzias_melastigma
ENSPMAG00000003556	si:dkey-10f23.2	100	54.875	ENSOGAG00000000775	NFX1	70	54.875	Otolemur_garnettii
ENSPMAG00000003556	si:dkey-10f23.2	100	55.639	ENSOARG00000009478	NFX1	70	55.639	Ovis_aries
ENSPMAG00000003556	si:dkey-10f23.2	100	56.946	ENSPPAG00000027871	NFX1	70	56.946	Pan_paniscus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.875	ENSPPRG00000000665	NFX1	70	56.875	Panthera_pardus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.875	ENSPTIG00000012443	NFX1	70	56.875	Panthera_tigris_altaica
ENSPMAG00000003556	si:dkey-10f23.2	100	56.946	ENSPTRG00000020858	NFX1	70	56.946	Pan_troglodytes
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSPANG00000025304	NFX1	70	56.446	Papio_anubis
ENSPMAG00000003556	si:dkey-10f23.2	100	57.519	ENSPKIG00000016899	si:dkey-10f23.2	73	57.519	Paramormyrops_kingsleyae
ENSPMAG00000003556	si:dkey-10f23.2	100	57.447	ENSPSIG00000008420	NFX1	69	57.447	Pelodiscus_sinensis
ENSPMAG00000003556	si:dkey-10f23.2	100	56.375	ENSPEMG00000007625	Nfx1	71	56.375	Peromyscus_maniculatus_bairdii
ENSPMAG00000003556	si:dkey-10f23.2	99	56.030	ENSPFOG00000012547	si:dkey-10f23.2	74	56.030	Poecilia_formosa
ENSPMAG00000003556	si:dkey-10f23.2	99	56.156	ENSPLAG00000010574	si:dkey-10f23.2	74	56.156	Poecilia_latipinna
ENSPMAG00000003556	si:dkey-10f23.2	99	55.779	ENSPMEG00000015322	si:dkey-10f23.2	74	55.779	Poecilia_mexicana
ENSPMAG00000003556	si:dkey-10f23.2	99	56.281	ENSPREG00000006186	si:dkey-10f23.2	74	56.281	Poecilia_reticulata
ENSPMAG00000003556	si:dkey-10f23.2	89	55.634	ENSPPYG00000019136	-	100	55.634	Pongo_abelii
ENSPMAG00000003556	si:dkey-10f23.2	92	48.505	ENSPCAG00000006913	NFX1	65	48.505	Procavia_capensis
ENSPMAG00000003556	si:dkey-10f23.2	100	56.571	ENSPCOG00000015789	NFX1	70	56.571	Propithecus_coquereli
ENSPMAG00000003556	si:dkey-10f23.2	92	52.853	ENSPVAG00000011479	NFX1	65	52.853	Pteropus_vampyrus
ENSPMAG00000003556	si:dkey-10f23.2	99	55.960	ENSPNYG00000002175	si:dkey-10f23.2	74	55.960	Pundamilia_nyererei
ENSPMAG00000003556	si:dkey-10f23.2	100	56.500	ENSPNAG00000016667	si:dkey-10f23.2	71	56.500	Pygocentrus_nattereri
ENSPMAG00000003556	si:dkey-10f23.2	100	56.320	ENSRNOG00000009015	Nfx1	70	56.320	Rattus_norvegicus
ENSPMAG00000003556	si:dkey-10f23.2	100	45.018	ENSRBIG00000036482	NFX1	68	45.879	Rhinopithecus_bieti
ENSPMAG00000003556	si:dkey-10f23.2	100	56.446	ENSRROG00000026461	NFX1	76	56.446	Rhinopithecus_roxellana
ENSPMAG00000003556	si:dkey-10f23.2	100	48.811	ENSSBOG00000035261	NFX1	67	48.686	Saimiri_boliviensis_boliviensis
ENSPMAG00000003556	si:dkey-10f23.2	100	57.447	ENSSHAG00000010272	NFX1	70	57.357	Sarcophilus_harrisii
ENSPMAG00000003556	si:dkey-10f23.2	100	56.838	ENSSFOG00015019271	si:dkey-10f23.2	72	56.838	Scleropages_formosus
ENSPMAG00000003556	si:dkey-10f23.2	99	55.583	ENSSMAG00000015963	si:dkey-10f23.2	75	55.583	Scophthalmus_maximus
ENSPMAG00000003556	si:dkey-10f23.2	99	55.332	ENSSDUG00000009395	si:dkey-10f23.2	72	55.332	Seriola_dumerili
ENSPMAG00000003556	si:dkey-10f23.2	99	55.332	ENSSLDG00000023817	si:dkey-10f23.2	72	55.332	Seriola_lalandi_dorsalis
ENSPMAG00000003556	si:dkey-10f23.2	73	63.492	ENSSARG00000014320	NFX1	58	63.492	Sorex_araneus
ENSPMAG00000003556	si:dkey-10f23.2	99	55.207	ENSSPAG00000012861	si:dkey-10f23.2	72	55.207	Stegastes_partitus
ENSPMAG00000003556	si:dkey-10f23.2	100	54.625	ENSSSCG00000010994	NFX1	70	54.625	Sus_scrofa
ENSPMAG00000003556	si:dkey-10f23.2	100	51.189	ENSTGUG00000007055	NFX1	99	51.189	Taeniopygia_guttata
ENSPMAG00000003556	si:dkey-10f23.2	84	58.824	ENSTBEG00000004560	NFX1	59	58.065	Tupaia_belangeri
ENSPMAG00000003556	si:dkey-10f23.2	96	67.626	ENSTTRG00000010576	NFX1	56	67.626	Tursiops_truncatus
ENSPMAG00000003556	si:dkey-10f23.2	100	56.750	ENSUMAG00000006016	NFX1	70	56.750	Ursus_maritimus
ENSPMAG00000003556	si:dkey-10f23.2	100	57.125	ENSVVUG00000021100	NFX1	70	57.125	Vulpes_vulpes
ENSPMAG00000003556	si:dkey-10f23.2	100	56.180	ENSXETG00000014997	nfx1	70	56.180	Xenopus_tropicalis
ENSPMAG00000003556	si:dkey-10f23.2	99	56.030	ENSXMAG00000001963	si:dkey-10f23.2	74	56.030	Xiphophorus_maculatus