EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000003593 (Gene tree)
Gene ID: -
Gene Symbol: sar1b
Alias: -
Full Name: secretion associated%2C Ras related GTPase 1B
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 6028 bases
Position: chrGL476360:120303-126330
Accession: ZDB-GENE-040426-1958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000003933	MMR_HSR1	PF01926.23	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000003949	-	883	-	ENSPMAP00000003933	201 (aa)	-	S4RFF1

Gene Model

Click here to download ENSPMAG00000003593's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003593's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000003593	sar1b	87	33.898	ENSPMAG00000010222	ARF6	91	33.898
ENSPMAG00000003593	sar1b	57	33.333	ENSPMAG00000005571	-	82	33.333
ENSPMAG00000003593	sar1b	70	32.624	ENSPMAG00000003819	-	77	32.624
ENSPMAG00000003593	sar1b	66	36.957	ENSPMAG00000010027	ARL4A	68	36.957
ENSPMAG00000003593	sar1b	88	30.508	ENSPMAG00000009600	arf4a	91	30.508
ENSPMAG00000003593	sar1b	64	35.075	ENSPMAG00000010406	ARL4A	66	35.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003593	sar1b	100	80.597	ENSAPOG00000017891	-	100	80.597	Acanthochromis_polyacanthus
ENSPMAG00000003593	sar1b	100	84.080	ENSAPOG00000007186	sar1b	100	84.080	Acanthochromis_polyacanthus
ENSPMAG00000003593	sar1b	100	86.070	ENSACIG00000013634	sar1b	100	86.070	Amphilophus_citrinellus
ENSPMAG00000003593	sar1b	100	79.602	ENSACIG00000024513	-	100	79.602	Amphilophus_citrinellus
ENSPMAG00000003593	sar1b	100	83.582	ENSAOCG00000005888	sar1b	100	83.582	Amphiprion_ocellaris
ENSPMAG00000003593	sar1b	100	80.597	ENSAOCG00000002627	-	100	80.597	Amphiprion_ocellaris
ENSPMAG00000003593	sar1b	100	80.597	ENSAPEG00000019680	-	100	80.597	Amphiprion_percula
ENSPMAG00000003593	sar1b	100	83.582	ENSAPEG00000022771	sar1b	100	83.582	Amphiprion_percula
ENSPMAG00000003593	sar1b	100	82.587	ENSATEG00000012904	sar1b	100	82.587	Anabas_testudineus
ENSPMAG00000003593	sar1b	100	78.607	ENSATEG00000023368	-	100	78.607	Anabas_testudineus
ENSPMAG00000003593	sar1b	100	84.080	ENSACAG00000001470	-	100	84.080	Anolis_carolinensis
ENSPMAG00000003593	sar1b	100	84.080	ENSACLG00000014649	sar1b	100	84.080	Astatotilapia_calliptera
ENSPMAG00000003593	sar1b	100	80.597	ENSACLG00000005011	-	100	80.597	Astatotilapia_calliptera
ENSPMAG00000003593	sar1b	100	81.095	ENSAMXG00000034192	-	91	81.095	Astyanax_mexicanus
ENSPMAG00000003593	sar1b	60	83.333	ENSAMXG00000018108	sar1b	84	83.333	Astyanax_mexicanus
ENSPMAG00000003593	sar1b	100	78.607	ENSCSEG00000016976	-	100	78.607	Cynoglossus_semilaevis
ENSPMAG00000003593	sar1b	92	84.865	ENSCSEG00000015238	sar1b	90	84.865	Cynoglossus_semilaevis
ENSPMAG00000003593	sar1b	100	84.577	ENSCVAG00000022959	sar1b	100	84.577	Cyprinodon_variegatus
ENSPMAG00000003593	sar1b	100	86.070	ENSDARG00000103403	sar1b	100	86.070	Danio_rerio
ENSPMAG00000003593	sar1b	97	67.010	FBgn0038947	Sar1	99	67.010	Drosophila_melanogaster
ENSPMAG00000003593	sar1b	97	83.077	ENSEBUG00000011723	sar1b	97	83.077	Eptatretus_burgeri
ENSPMAG00000003593	sar1b	100	85.572	ENSELUG00000020912	sar1b	100	85.572	Esox_lucius
ENSPMAG00000003593	sar1b	100	84.080	ENSFHEG00000019865	sar1b	100	84.080	Fundulus_heteroclitus
ENSPMAG00000003593	sar1b	100	84.080	ENSGMOG00000008023	sar1b	100	84.080	Gadus_morhua
ENSPMAG00000003593	sar1b	100	82.587	ENSGAFG00000007081	sar1b	100	82.587	Gambusia_affinis
ENSPMAG00000003593	sar1b	100	82.090	ENSGACG00000001474	sar1b	100	82.090	Gasterosteus_aculeatus
ENSPMAG00000003593	sar1b	100	80.597	ENSHBUG00000018397	-	100	80.597	Haplochromis_burtoni
ENSPMAG00000003593	sar1b	100	84.080	ENSHBUG00000000915	sar1b	100	84.080	Haplochromis_burtoni
ENSPMAG00000003593	sar1b	100	84.080	ENSHCOG00000010953	sar1b	100	84.080	Hippocampus_comes
ENSPMAG00000003593	sar1b	100	80.100	ENSIPUG00000010046	sar1b	100	80.100	Ictalurus_punctatus
ENSPMAG00000003593	sar1b	100	84.577	ENSIPUG00000020925	sar1b	100	84.577	Ictalurus_punctatus
ENSPMAG00000003593	sar1b	100	79.104	ENSKMAG00000014875	-	100	79.104	Kryptolebias_marmoratus
ENSPMAG00000003593	sar1b	100	83.582	ENSKMAG00000019693	sar1b	100	83.582	Kryptolebias_marmoratus
ENSPMAG00000003593	sar1b	100	80.100	ENSLBEG00000027550	sar1b	100	80.100	Labrus_bergylta
ENSPMAG00000003593	sar1b	100	81.592	ENSLBEG00000016945	-	100	81.592	Labrus_bergylta
ENSPMAG00000003593	sar1b	100	82.090	ENSLACG00000010795	sar1b	100	82.090	Latimeria_chalumnae
ENSPMAG00000003593	sar1b	100	71.144	ENSLACG00000017029	-	100	71.144	Latimeria_chalumnae
ENSPMAG00000003593	sar1b	100	85.572	ENSLOCG00000005214	-	100	85.572	Lepisosteus_oculatus
ENSPMAG00000003593	sar1b	100	85.075	ENSLOCG00000010197	sar1b	100	85.075	Lepisosteus_oculatus
ENSPMAG00000003593	sar1b	100	83.085	ENSMAMG00000021732	sar1b	100	83.085	Mastacembelus_armatus
ENSPMAG00000003593	sar1b	100	80.597	ENSMZEG00005001012	-	100	80.597	Maylandia_zebra
ENSPMAG00000003593	sar1b	100	84.080	ENSMZEG00005008942	sar1b	100	84.080	Maylandia_zebra
ENSPMAG00000003593	sar1b	91	85.165	ENSMGAG00000005387	-	91	85.165	Meleagris_gallopavo
ENSPMAG00000003593	sar1b	100	80.100	ENSMMOG00000013803	-	100	80.100	Mola_mola
ENSPMAG00000003593	sar1b	100	83.582	ENSMALG00000016635	sar1b	97	83.243	Monopterus_albus
ENSPMAG00000003593	sar1b	100	80.597	ENSNBRG00000014004	-	100	80.597	Neolamprologus_brichardi
ENSPMAG00000003593	sar1b	100	84.577	ENSNBRG00000008013	sar1b	100	84.577	Neolamprologus_brichardi
ENSPMAG00000003593	sar1b	100	85.572	ENSONIG00000017278	sar1b	100	85.572	Oreochromis_niloticus
ENSPMAG00000003593	sar1b	100	85.075	ENSORLG00000000932	sar1b	100	85.075	Oryzias_latipes
ENSPMAG00000003593	sar1b	100	85.075	ENSORLG00020021985	sar1b	100	85.075	Oryzias_latipes_hni
ENSPMAG00000003593	sar1b	100	85.075	ENSORLG00015007044	sar1b	100	85.075	Oryzias_latipes_hsok
ENSPMAG00000003593	sar1b	100	84.577	ENSOMEG00000001052	sar1b	100	84.577	Oryzias_melastigma
ENSPMAG00000003593	sar1b	100	83.582	ENSPKIG00000010688	sar1b	100	83.582	Paramormyrops_kingsleyae
ENSPMAG00000003593	sar1b	100	85.572	ENSPKIG00000017353	-	100	85.572	Paramormyrops_kingsleyae
ENSPMAG00000003593	sar1b	59	81.513	ENSPMGG00000001234	sar1b	91	81.513	Periophthalmus_magnuspinnatus
ENSPMAG00000003593	sar1b	100	82.587	ENSPFOG00000005666	sar1b	100	82.587	Poecilia_formosa
ENSPMAG00000003593	sar1b	60	78.333	ENSPLAG00000001016	-	75	78.333	Poecilia_latipinna
ENSPMAG00000003593	sar1b	100	83.085	ENSPLAG00000012223	sar1b	100	83.085	Poecilia_latipinna
ENSPMAG00000003593	sar1b	100	82.587	ENSPMEG00000016831	sar1b	100	82.587	Poecilia_mexicana
ENSPMAG00000003593	sar1b	100	82.587	ENSPREG00000005312	sar1b	90	82.587	Poecilia_reticulata
ENSPMAG00000003593	sar1b	60	77.686	ENSPREG00000002020	-	87	77.686	Poecilia_reticulata
ENSPMAG00000003593	sar1b	100	81.095	ENSPNYG00000021357	-	100	81.095	Pundamilia_nyererei
ENSPMAG00000003593	sar1b	100	84.080	ENSPNYG00000012440	sar1b	100	84.080	Pundamilia_nyererei
ENSPMAG00000003593	sar1b	100	85.572	ENSPNAG00000014683	sar1b	100	85.572	Pygocentrus_nattereri
ENSPMAG00000003593	sar1b	100	82.090	ENSPNAG00000001123	-	100	82.090	Pygocentrus_nattereri
ENSPMAG00000003593	sar1b	100	85.075	ENSSFOG00015018128	-	100	85.075	Scleropages_formosus
ENSPMAG00000003593	sar1b	100	86.070	ENSSFOG00015020051	sar1b	100	86.070	Scleropages_formosus
ENSPMAG00000003593	sar1b	100	81.592	ENSSMAG00000007106	sar1b	80	81.592	Scophthalmus_maximus
ENSPMAG00000003593	sar1b	100	79.602	ENSSMAG00000002165	-	100	79.602	Scophthalmus_maximus
ENSPMAG00000003593	sar1b	100	85.075	ENSSDUG00000020926	sar1b	100	85.075	Seriola_dumerili
ENSPMAG00000003593	sar1b	100	80.100	ENSSDUG00000019629	-	100	80.100	Seriola_dumerili
ENSPMAG00000003593	sar1b	100	80.100	ENSSLDG00000024197	-	100	80.100	Seriola_lalandi_dorsalis
ENSPMAG00000003593	sar1b	100	85.075	ENSSLDG00000017052	sar1b	100	85.075	Seriola_lalandi_dorsalis
ENSPMAG00000003593	sar1b	100	84.577	ENSSPUG00000010247	-	100	84.577	Sphenodon_punctatus
ENSPMAG00000003593	sar1b	100	84.577	ENSSPAG00000017634	sar1b	100	84.577	Stegastes_partitus
ENSPMAG00000003593	sar1b	100	80.100	ENSSPAG00000015626	-	100	80.100	Stegastes_partitus
ENSPMAG00000003593	sar1b	99	80.500	ENSTRUG00000023908	sar1b	99	80.500	Takifugu_rubripes
ENSPMAG00000003593	sar1b	99	82.500	ENSTNIG00000016097	sar1b	99	82.500	Tetraodon_nigroviridis
ENSPMAG00000003593	sar1b	60	76.667	ENSXCOG00000006154	-	79	76.667	Xiphophorus_couchianus
ENSPMAG00000003593	sar1b	90	83.425	ENSXCOG00000004160	sar1b	87	83.425	Xiphophorus_couchianus
ENSPMAG00000003593	sar1b	100	82.587	ENSXMAG00000008294	sar1b	100	82.587	Xiphophorus_maculatus