EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000003743 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396 (1 of many)
Alias: -
Full Name: zgc:162396
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 10692 bases
Position: chrGL483870:8452-19143
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004071	Methyltransf_31	PF13847.6	4e-10	1	1
ENSPMAP00000004071	Methyltransf_8	PF05148.15	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004088	-	732	-	ENSPMAP00000004071	244 (aa)	-	S4RFT9

Gene Model

Click here to download ENSPMAG00000003743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000003743	zgc:162396	82	46.734	ENSPMAG00000006166	zgc:162396	100	46.734
ENSPMAG00000003743	zgc:162396	82	45.729	ENSPMAG00000004744	zgc:162396	86	45.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003743	zgc:162396	99	36.214	ENSAPOG00000015421	zgc:162396	89	36.214	Acanthochromis_polyacanthus
ENSPMAG00000003743	zgc:162396	99	38.272	ENSACIG00000015427	zgc:162396	89	38.272	Amphilophus_citrinellus
ENSPMAG00000003743	zgc:162396	100	37.959	ENSAOCG00000004131	zgc:162396	90	37.959	Amphiprion_ocellaris
ENSPMAG00000003743	zgc:162396	99	38.272	ENSAPEG00000008189	zgc:162396	89	38.272	Amphiprion_percula
ENSPMAG00000003743	zgc:162396	99	38.272	ENSATEG00000011813	zgc:162396	88	38.272	Anabas_testudineus
ENSPMAG00000003743	zgc:162396	99	37.344	ENSAPLG00000012593	-	89	37.344	Anas_platyrhynchos
ENSPMAG00000003743	zgc:162396	99	37.449	ENSACLG00000006906	zgc:162396	89	37.449	Astatotilapia_calliptera
ENSPMAG00000003743	zgc:162396	86	35.071	ENSAMXG00000037578	zgc:162396	79	34.673	Astyanax_mexicanus
ENSPMAG00000003743	zgc:162396	100	39.344	ENSAMXG00000030552	zgc:162396	90	39.344	Astyanax_mexicanus
ENSPMAG00000003743	zgc:162396	99	38.776	ENSCPBG00000002804	-	91	35.950	Chrysemys_picta_bellii
ENSPMAG00000003743	zgc:162396	92	33.624	ENSCING00000012960	-	83	33.624	Ciona_intestinalis
ENSPMAG00000003743	zgc:162396	77	31.383	ENSCING00000014393	-	83	31.383	Ciona_intestinalis
ENSPMAG00000003743	zgc:162396	99	38.272	ENSCVAG00000021429	zgc:162396	89	38.272	Cyprinodon_variegatus
ENSPMAG00000003743	zgc:162396	100	39.344	ENSDARG00000069549	zgc:162396	90	39.344	Danio_rerio
ENSPMAG00000003743	zgc:162396	99	38.843	ENSELUG00000005372	zgc:162396	89	38.843	Esox_lucius
ENSPMAG00000003743	zgc:162396	99	37.190	ENSFALG00000012826	-	89	37.190	Ficedula_albicollis
ENSPMAG00000003743	zgc:162396	99	38.683	ENSFHEG00000005224	-	89	38.683	Fundulus_heteroclitus
ENSPMAG00000003743	zgc:162396	99	37.190	ENSGALG00000042073	-	89	37.190	Gallus_gallus
ENSPMAG00000003743	zgc:162396	99	37.190	ENSGALG00000050548	-	89	37.190	Gallus_gallus
ENSPMAG00000003743	zgc:162396	99	37.190	ENSGALG00000047535	-	89	37.190	Gallus_gallus
ENSPMAG00000003743	zgc:162396	99	39.506	ENSGAFG00000018387	-	89	39.506	Gambusia_affinis
ENSPMAG00000003743	zgc:162396	99	37.037	ENSGACG00000002200	zgc:162396	86	37.037	Gasterosteus_aculeatus
ENSPMAG00000003743	zgc:162396	52	46.032	ENSGAGG00000004677	-	76	46.032	Gopherus_agassizii
ENSPMAG00000003743	zgc:162396	99	37.037	ENSHBUG00000017584	zgc:162396	89	37.037	Haplochromis_burtoni
ENSPMAG00000003743	zgc:162396	99	38.430	ENSIPUG00000001159	zgc:162396	89	38.430	Ictalurus_punctatus
ENSPMAG00000003743	zgc:162396	99	39.669	ENSIPUG00000001213	-	89	39.669	Ictalurus_punctatus
ENSPMAG00000003743	zgc:162396	99	39.669	ENSIPUG00000001171	-	89	39.669	Ictalurus_punctatus
ENSPMAG00000003743	zgc:162396	100	37.551	ENSKMAG00000018426	-	90	37.551	Kryptolebias_marmoratus
ENSPMAG00000003743	zgc:162396	99	39.506	ENSLBEG00000026502	zgc:162396	89	39.506	Labrus_bergylta
ENSPMAG00000003743	zgc:162396	99	38.843	ENSLACG00000009261	-	89	38.843	Latimeria_chalumnae
ENSPMAG00000003743	zgc:162396	94	40.435	ENSMAMG00000013213	zgc:162396	85	40.435	Mastacembelus_armatus
ENSPMAG00000003743	zgc:162396	99	37.449	ENSMZEG00005000798	zgc:162396	89	37.449	Maylandia_zebra
ENSPMAG00000003743	zgc:162396	99	36.735	ENSMGAG00000003269	-	89	36.735	Meleagris_gallopavo
ENSPMAG00000003743	zgc:162396	99	36.214	ENSMMOG00000005445	zgc:162396	89	36.214	Mola_mola
ENSPMAG00000003743	zgc:162396	99	37.860	ENSNBRG00000014954	zgc:162396	89	37.860	Neolamprologus_brichardi
ENSPMAG00000003743	zgc:162396	99	36.626	ENSONIG00000004463	zgc:162396	89	36.626	Oreochromis_niloticus
ENSPMAG00000003743	zgc:162396	56	33.088	ENSOANG00000015675	-	77	33.088	Ornithorhynchus_anatinus
ENSPMAG00000003743	zgc:162396	99	35.950	ENSOANG00000021828	-	87	35.950	Ornithorhynchus_anatinus
ENSPMAG00000003743	zgc:162396	67	43.030	ENSORLG00000018107	zgc:162396	95	43.030	Oryzias_latipes
ENSPMAG00000003743	zgc:162396	99	41.393	ENSORLG00015008543	zgc:162396	89	41.393	Oryzias_latipes_hsok
ENSPMAG00000003743	zgc:162396	100	39.837	ENSOMEG00000010640	zgc:162396	99	39.837	Oryzias_melastigma
ENSPMAG00000003743	zgc:162396	97	38.819	ENSPKIG00000014798	zgc:162396	87	38.819	Paramormyrops_kingsleyae
ENSPMAG00000003743	zgc:162396	99	33.884	ENSPSIG00000016701	-	89	33.884	Pelodiscus_sinensis
ENSPMAG00000003743	zgc:162396	99	37.037	ENSPFOG00000002666	zgc:162396	89	37.037	Poecilia_formosa
ENSPMAG00000003743	zgc:162396	99	37.449	ENSPLAG00000010281	zgc:162396	89	37.449	Poecilia_latipinna
ENSPMAG00000003743	zgc:162396	99	37.860	ENSPMEG00000002349	zgc:162396	89	37.860	Poecilia_mexicana
ENSPMAG00000003743	zgc:162396	99	38.683	ENSPREG00000016491	zgc:162396	89	38.683	Poecilia_reticulata
ENSPMAG00000003743	zgc:162396	99	37.449	ENSPNYG00000009858	zgc:162396	89	37.449	Pundamilia_nyererei
ENSPMAG00000003743	zgc:162396	100	40.984	ENSPNAG00000004920	zgc:162396	90	40.984	Pygocentrus_nattereri
ENSPMAG00000003743	zgc:162396	99	40.496	ENSPNAG00000026074	zgc:162396	89	40.496	Pygocentrus_nattereri
ENSPMAG00000003743	zgc:162396	99	40.083	ENSSFOG00015023503	zgc:162396	89	40.083	Scleropages_formosus
ENSPMAG00000003743	zgc:162396	99	39.669	ENSSFOG00015023495	zgc:162396	89	39.669	Scleropages_formosus
ENSPMAG00000003743	zgc:162396	99	39.506	ENSSMAG00000004484	zgc:162396	89	39.506	Scophthalmus_maximus
ENSPMAG00000003743	zgc:162396	99	37.860	ENSSDUG00000010278	zgc:162396	89	37.860	Seriola_dumerili
ENSPMAG00000003743	zgc:162396	99	38.272	ENSSLDG00000021423	zgc:162396	89	38.272	Seriola_lalandi_dorsalis
ENSPMAG00000003743	zgc:162396	99	35.124	ENSSPUG00000015532	-	76	35.124	Sphenodon_punctatus
ENSPMAG00000003743	zgc:162396	99	37.860	ENSSPAG00000005505	zgc:162396	89	37.860	Stegastes_partitus
ENSPMAG00000003743	zgc:162396	99	38.017	ENSTGUG00000003861	-	90	38.017	Taeniopygia_guttata
ENSPMAG00000003743	zgc:162396	64	35.897	ENSTGUG00000015044	-	83	35.897	Taeniopygia_guttata
ENSPMAG00000003743	zgc:162396	99	37.143	ENSTRUG00000010648	-	89	37.143	Takifugu_rubripes
ENSPMAG00000003743	zgc:162396	89	38.073	ENSTRUG00000007506	zgc:162396	84	38.073	Takifugu_rubripes
ENSPMAG00000003743	zgc:162396	100	37.398	ENSTNIG00000001485	zgc:162396	90	37.398	Tetraodon_nigroviridis
ENSPMAG00000003743	zgc:162396	99	31.818	ENSXETG00000033236	-	85	31.818	Xenopus_tropicalis
ENSPMAG00000003743	zgc:162396	97	39.076	ENSXCOG00000014529	zgc:162396	88	39.076	Xiphophorus_couchianus
ENSPMAG00000003743	zgc:162396	99	38.683	ENSXMAG00000023129	zgc:162396	89	38.683	Xiphophorus_maculatus