EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003771 (Gene tree)
Gene ID: -
Gene Symbol: SNRPA
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide A
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 2393 bases
Position: chrGL493652:2141-4533
Accession: 11151
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004111	RRM_1	PF00076.22	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004128	SNRPA-201	558	-	ENSPMAP00000004111	186 (aa)	-	S4RFX9

Gene Model

Click here to download ENSPMAG00000003771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003771's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003771	SNRPA	97	59.487	ENSG00000077312	SNRPA	93	74.074	Homo_sapiens
ENSPMAG00000003771	SNRPA	97	60.914	ENSCJAG00000014865	-	50	79.798	Callithrix_jacchus
ENSPMAG00000003771	SNRPA	54	73.529	ENSCAFG00000031370	-	58	77.083	Canis_familiaris
ENSPMAG00000003771	SNRPA	97	60.914	ENSCAFG00020014898	SNRPA	85	72.289	Canis_lupus_dingo
ENSPMAG00000003771	SNRPA	97	59.898	ENSTSYG00000007632	SNRPA	50	79.798	Carlito_syrichta
ENSPMAG00000003771	SNRPA	64	60.000	ENSTSYG00000030443	-	55	64.000	Carlito_syrichta
ENSPMAG00000003771	SNRPA	62	59.829	ENSTSYG00000034767	-	53	63.918	Carlito_syrichta
ENSPMAG00000003771	SNRPA	62	59.829	ENSTSYG00000029747	-	53	63.918	Carlito_syrichta
ENSPMAG00000003771	SNRPA	97	60.000	ENSCATG00000032716	SNRPA	86	72.289	Cercocebus_atys
ENSPMAG00000003771	SNRPA	97	60.000	ENSCANG00000038637	SNRPA	78	77.632	Colobus_angolensis_palliatus
ENSPMAG00000003771	SNRPA	65	53.719	ENSCGRG00001020641	-	50	59.184	Cricetulus_griseus_chok1gshd
ENSPMAG00000003771	SNRPA	65	53.719	ENSCGRG00000010980	-	50	59.184	Cricetulus_griseus_crigri
ENSPMAG00000003771	SNRPA	84	61.146	ENSDARG00000018890	snrpa	52	77.670	Danio_rerio
ENSPMAG00000003771	SNRPA	97	60.000	ENSMFAG00000041710	SNRPA	86	72.289	Macaca_fascicularis
ENSPMAG00000003771	SNRPA	97	60.000	ENSMMUG00000022024	SNRPA	80	77.632	Macaca_mulatta
ENSPMAG00000003771	SNRPA	97	60.000	ENSMLEG00000039593	SNRPA	86	72.289	Mandrillus_leucophaeus
ENSPMAG00000003771	SNRPA	97	60.406	ENSMICG00000009766	SNRPA	50	78.788	Microcebus_murinus
ENSPMAG00000003771	SNRPA	64	67.500	MGP_CAROLIEiJ_G0024372	Snrpb2	70	68.000	Mus_caroli
ENSPMAG00000003771	SNRPA	64	67.500	ENSMUSG00000008333	Snrpb2	70	68.000	Mus_musculus
ENSPMAG00000003771	SNRPA	64	67.500	MGP_PahariEiJ_G0025817	Snrpb2	70	68.000	Mus_pahari
ENSPMAG00000003771	SNRPA	64	67.500	MGP_SPRETEiJ_G0025291	Snrpb2	70	68.000	Mus_spretus
ENSPMAG00000003771	SNRPA	97	60.000	ENSPANG00000023874	SNRPA	86	72.289	Papio_anubis
ENSPMAG00000003771	SNRPA	58	70.642	ENSPMGG00000014087	snrpa	50	72.549	Periophthalmus_magnuspinnatus
ENSPMAG00000003771	SNRPA	97	60.914	ENSPCOG00000025196	SNRPA	76	77.632	Propithecus_coquereli
ENSPMAG00000003771	SNRPA	72	62.963	ENSPNYG00000015510	snrpb2	52	50.388	Pundamilia_nyererei
ENSPMAG00000003771	SNRPA	97	62.162	ENSRBIG00000008335	SNRPA	78	77.632	Rhinopithecus_bieti
ENSPMAG00000003771	SNRPA	97	60.000	ENSRROG00000042727	SNRPA	78	77.632	Rhinopithecus_roxellana
ENSPMAG00000003771	SNRPA	97	60.914	ENSSBOG00000034722	SNRPA	60	72.289	Saimiri_boliviensis_boliviensis
ENSPMAG00000003771	SNRPA	52	64.948	ENSVVUG00000025808	-	52	63.725	Vulpes_vulpes
ENSPMAG00000003771	SNRPA	97	60.914	ENSVVUG00000005647	SNRPA	85	72.289	Vulpes_vulpes