EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003855 (Gene tree)
Gene ID: -
Gene Symbol: ncl
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 10564 bases
Position: chrGL477453:332590-343153
Accession: ZDB-GENE-030131-6986
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004252	RRM_1	PF00076.22	5.1e-44	1	3
ENSPMAP00000004252	RRM_1	PF00076.22	5.1e-44	2	3
ENSPMAP00000004252	RRM_1	PF00076.22	5.1e-44	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004269	-	2228	-	ENSPMAP00000004252	702 (aa)	-	S4RGC0

Gene Model

Click here to download ENSPMAG00000003855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003855	ncl	58	40.136	ENSDARG00000002710	ncl	83	48.014	Danio_rerio
ENSPMAG00000003855	ncl	74	40.323	ENSGACG00000008970	ncl	72	49.310	Gasterosteus_aculeatus
ENSPMAG00000003855	ncl	70	37.566	ENSGAGG00000013330	-	65	39.545	Gopherus_agassizii
ENSPMAG00000003855	ncl	56	42.206	ENSKMAG00000008111	ncl	64	42.484	Kryptolebias_marmoratus
ENSPMAG00000003855	ncl	64	40.278	ENSLACG00000009328	ncl	78	38.462	Latimeria_chalumnae
ENSPMAG00000003855	ncl	53	45.172	ENSMODG00000002470	-	59	46.622	Monodelphis_domestica
ENSPMAG00000003855	ncl	54	46.341	ENSMEUG00000012335	-	60	47.079	Notamacropus_eugenii
ENSPMAG00000003855	ncl	57	40.141	ENSORLG00015013815	ncl	85	51.685	Oryzias_latipes_hsok
ENSPMAG00000003855	ncl	57	38.073	ENSPKIG00000002604	ncl	64	40.340	Paramormyrops_kingsleyae
ENSPMAG00000003855	ncl	59	37.900	ENSPMGG00000004709	ncl	79	47.148	Periophthalmus_magnuspinnatus