EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000003938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 13811 bases
Position: chrGL479170:18391-32201
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004289	LSM	PF01423.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004306	-	500	-	ENSPMAP00000004289	122 (aa)	-	S4RGF7

Gene Model

Click here to download ENSPMAG00000003938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000003938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000003938	-	85	82.692	ENSG00000167088	SNRPD1	86	82.692	Homo_sapiens
ENSPMAG00000003938	-	85	82.692	ENSAPOG00000019446	snrpd1	56	82.692	Acanthochromis_polyacanthus
ENSPMAG00000003938	-	84	81.373	ENSAMEG00000002576	SNRPD1	85	81.373	Ailuropoda_melanoleuca
ENSPMAG00000003938	-	80	82.474	ENSACIG00000011263	snrpd1	85	82.474	Amphilophus_citrinellus
ENSPMAG00000003938	-	85	82.692	ENSAOCG00000007406	snrpd1	86	82.692	Amphiprion_ocellaris
ENSPMAG00000003938	-	80	82.474	ENSAPEG00000012539	SNRPD1	85	82.474	Amphiprion_percula
ENSPMAG00000003938	-	85	76.923	ENSAPEG00000014961	snrpd1	85	76.923	Amphiprion_percula
ENSPMAG00000003938	-	85	82.692	ENSATEG00000014399	snrpd1	86	82.692	Anabas_testudineus
ENSPMAG00000003938	-	84	81.373	ENSAPLG00000012256	SNRPD1	84	81.373	Anas_platyrhynchos
ENSPMAG00000003938	-	85	82.692	ENSACAG00000006364	SNRPD1	86	82.692	Anolis_carolinensis
ENSPMAG00000003938	-	85	82.692	ENSANAG00000025641	SNRPD1	86	82.692	Aotus_nancymaae
ENSPMAG00000003938	-	80	82.474	ENSACLG00000017406	snrpd1	85	82.474	Astatotilapia_calliptera
ENSPMAG00000003938	-	85	82.692	ENSAMXG00000004589	snrpd1	86	82.692	Astyanax_mexicanus
ENSPMAG00000003938	-	84	79.412	ENSBTAG00000055316	-	86	79.412	Bos_taurus
ENSPMAG00000003938	-	80	80.412	ENSBTAG00000012376	-	70	81.250	Bos_taurus
ENSPMAG00000003938	-	85	80.769	ENSBTAG00000047266	-	86	80.769	Bos_taurus
ENSPMAG00000003938	-	85	82.692	ENSBTAG00000008292	SNRPD1	86	82.692	Bos_taurus
ENSPMAG00000003938	-	74	75.556	WBGene00004916	snr-3	76	72.449	Caenorhabditis_elegans
ENSPMAG00000003938	-	85	82.692	ENSCJAG00000042955	SNRPD1	86	82.692	Callithrix_jacchus
ENSPMAG00000003938	-	85	82.692	ENSCAFG00000018247	SNRPD1	86	82.692	Canis_familiaris
ENSPMAG00000003938	-	80	82.474	ENSCAFG00020015914	SNRPD1	73	83.333	Canis_lupus_dingo
ENSPMAG00000003938	-	85	80.769	ENSCHIG00000005557	SNRPD1	84	82.353	Capra_hircus
ENSPMAG00000003938	-	85	82.692	ENSTSYG00000030028	SNRPD1	86	82.692	Carlito_syrichta
ENSPMAG00000003938	-	82	82.000	ENSCAPG00000008103	SNRPD1	84	82.000	Cavia_aperea
ENSPMAG00000003938	-	85	82.692	ENSCPOG00000004679	SNRPD1	86	82.692	Cavia_porcellus
ENSPMAG00000003938	-	85	80.769	ENSCCAG00000005390	-	86	80.769	Cebus_capucinus
ENSPMAG00000003938	-	85	82.692	ENSCCAG00000032658	SNRPD1	86	82.692	Cebus_capucinus
ENSPMAG00000003938	-	85	81.731	ENSCCAG00000020611	-	86	81.731	Cebus_capucinus
ENSPMAG00000003938	-	85	80.769	ENSCCAG00000016652	-	86	80.769	Cebus_capucinus
ENSPMAG00000003938	-	85	82.692	ENSCATG00000039978	SNRPD1	86	82.692	Cercocebus_atys
ENSPMAG00000003938	-	85	82.692	ENSCLAG00000008691	SNRPD1	86	82.692	Chinchilla_lanigera
ENSPMAG00000003938	-	85	82.692	ENSCSAG00000017654	SNRPD1	86	82.692	Chlorocebus_sabaeus
ENSPMAG00000003938	-	85	82.692	ENSCPBG00000023143	SNRPD1	86	82.692	Chrysemys_picta_bellii
ENSPMAG00000003938	-	72	88.636	ENSCING00000024100	-	69	88.636	Ciona_intestinalis
ENSPMAG00000003938	-	73	87.640	ENSCSAVG00000004578	-	69	88.636	Ciona_savignyi
ENSPMAG00000003938	-	80	60.825	ENSCGRG00001009945	-	82	62.105	Cricetulus_griseus_chok1gshd
ENSPMAG00000003938	-	85	82.692	ENSCGRG00001021055	-	86	82.692	Cricetulus_griseus_chok1gshd
ENSPMAG00000003938	-	80	60.825	ENSCGRG00000006224	-	82	62.105	Cricetulus_griseus_crigri
ENSPMAG00000003938	-	85	82.692	ENSCGRG00000000490	-	86	82.692	Cricetulus_griseus_crigri
ENSPMAG00000003938	-	85	81.731	ENSCSEG00000018141	snrpd1	86	81.731	Cynoglossus_semilaevis
ENSPMAG00000003938	-	85	82.692	ENSCVAG00000000534	snrpd1	86	82.692	Cyprinodon_variegatus
ENSPMAG00000003938	-	85	82.692	ENSDARG00000011648	snrpd1	96	82.796	Danio_rerio
ENSPMAG00000003938	-	85	82.692	ENSDNOG00000040310	SNRPD1	86	82.692	Dasypus_novemcinctus
ENSPMAG00000003938	-	85	82.692	ENSDORG00000008349	Snrpd1	86	82.692	Dipodomys_ordii
ENSPMAG00000003938	-	96	69.231	FBgn0261933	SmD1	96	68.595	Drosophila_melanogaster
ENSPMAG00000003938	-	58	80.282	ENSETEG00000011689	SNRPD1	60	80.282	Echinops_telfairi
ENSPMAG00000003938	-	85	90.385	ENSEBUG00000003170	snrpd1	94	90.722	Eptatretus_burgeri
ENSPMAG00000003938	-	80	82.474	ENSEASG00005002433	SNRPD1	85	82.474	Equus_asinus_asinus
ENSPMAG00000003938	-	80	82.474	ENSECAG00000014373	SNRPD1	85	82.474	Equus_caballus
ENSPMAG00000003938	-	75	83.516	ENSEEUG00000004987	SNRPD1	100	83.516	Erinaceus_europaeus
ENSPMAG00000003938	-	84	80.392	ENSELUG00000000088	snrpd1	79	82.292	Esox_lucius
ENSPMAG00000003938	-	85	82.692	ENSFCAG00000012352	SNRPD1	86	82.692	Felis_catus
ENSPMAG00000003938	-	80	82.474	ENSFALG00000002646	SNRPD1	85	82.474	Ficedula_albicollis
ENSPMAG00000003938	-	85	82.692	ENSGMOG00000015607	snrpd1	86	82.692	Gadus_morhua
ENSPMAG00000003938	-	85	82.692	ENSGALG00000041334	SNRPD1	86	82.692	Gallus_gallus
ENSPMAG00000003938	-	85	82.692	ENSGAFG00000011171	snrpd1	86	82.692	Gambusia_affinis
ENSPMAG00000003938	-	85	82.692	ENSGACG00000005201	SNRPD1	86	82.692	Gasterosteus_aculeatus
ENSPMAG00000003938	-	85	82.692	ENSGAGG00000011197	SNRPD1	86	82.692	Gopherus_agassizii
ENSPMAG00000003938	-	85	82.692	ENSGGOG00000041053	SNRPD1	86	82.692	Gorilla_gorilla
ENSPMAG00000003938	-	99	71.074	ENSGGOG00000026706	-	78	78.125	Gorilla_gorilla
ENSPMAG00000003938	-	85	82.692	ENSHBUG00000003236	snrpd1	86	82.692	Haplochromis_burtoni
ENSPMAG00000003938	-	85	82.692	ENSHGLG00000007152	SNRPD1	86	82.692	Heterocephalus_glaber_female
ENSPMAG00000003938	-	85	82.692	ENSHGLG00100008618	SNRPD1	86	82.692	Heterocephalus_glaber_male
ENSPMAG00000003938	-	85	82.692	ENSIPUG00000003576	snrpd1	86	82.692	Ictalurus_punctatus
ENSPMAG00000003938	-	85	82.692	ENSSTOG00000000485	SNRPD1	86	82.692	Ictidomys_tridecemlineatus
ENSPMAG00000003938	-	85	82.692	ENSJJAG00000017698	Snrpd1	86	82.692	Jaculus_jaculus
ENSPMAG00000003938	-	85	82.692	ENSKMAG00000005987	snrpd1	86	82.692	Kryptolebias_marmoratus
ENSPMAG00000003938	-	85	82.692	ENSLBEG00000003327	snrpd1	86	82.692	Labrus_bergylta
ENSPMAG00000003938	-	85	82.692	ENSLACG00000001955	SNRPD1	86	82.692	Latimeria_chalumnae
ENSPMAG00000003938	-	84	81.373	ENSLOCG00000002003	snrpd1	85	81.373	Lepisosteus_oculatus
ENSPMAG00000003938	-	84	81.553	ENSLAFG00000005819	SNRPD1	86	81.553	Loxodonta_africana
ENSPMAG00000003938	-	85	82.692	ENSMFAG00000042080	SNRPD1	86	82.692	Macaca_fascicularis
ENSPMAG00000003938	-	84	81.373	ENSMMUG00000003992	SNRPD1	83	82.828	Macaca_mulatta
ENSPMAG00000003938	-	85	82.692	ENSMNEG00000041296	SNRPD1	86	82.692	Macaca_nemestrina
ENSPMAG00000003938	-	85	82.692	ENSMLEG00000028659	SNRPD1	86	82.692	Mandrillus_leucophaeus
ENSPMAG00000003938	-	85	82.692	ENSMAMG00000012971	snrpd1	86	82.692	Mastacembelus_armatus
ENSPMAG00000003938	-	85	82.692	ENSMZEG00005004685	snrpd1	86	82.692	Maylandia_zebra
ENSPMAG00000003938	-	84	81.373	ENSMGAG00000011598	SNRPD1	83	81.373	Meleagris_gallopavo
ENSPMAG00000003938	-	83	78.218	ENSMAUG00000006829	-	59	82.796	Mesocricetus_auratus
ENSPMAG00000003938	-	79	70.833	ENSMAUG00000016502	-	85	70.833	Mesocricetus_auratus
ENSPMAG00000003938	-	79	70.833	ENSMAUG00000016467	-	85	70.833	Mesocricetus_auratus
ENSPMAG00000003938	-	85	82.692	ENSMICG00000044066	SNRPD1	86	82.692	Microcebus_murinus
ENSPMAG00000003938	-	85	82.692	ENSMOCG00000017367	Snrpd1	86	82.692	Microtus_ochrogaster
ENSPMAG00000003938	-	85	82.692	ENSMMOG00000019089	snrpd1	86	82.692	Mola_mola
ENSPMAG00000003938	-	85	82.692	ENSMODG00000021487	SNRPD1	86	82.692	Monodelphis_domestica
ENSPMAG00000003938	-	85	82.692	ENSMALG00000014459	snrpd1	86	82.692	Monopterus_albus
ENSPMAG00000003938	-	85	82.692	MGP_CAROLIEiJ_G0021994	Snrpd1	86	82.692	Mus_caroli
ENSPMAG00000003938	-	85	82.692	ENSMUSG00000002477	Snrpd1	86	82.692	Mus_musculus
ENSPMAG00000003938	-	85	82.692	MGP_PahariEiJ_G0018731	Snrpd1	86	82.692	Mus_pahari
ENSPMAG00000003938	-	85	82.692	MGP_SPRETEiJ_G0022910	Snrpd1	86	82.692	Mus_spretus
ENSPMAG00000003938	-	85	81.731	ENSMPUG00000020041	-	86	81.731	Mustela_putorius_furo
ENSPMAG00000003938	-	84	81.373	ENSMPUG00000005567	-	85	81.373	Mustela_putorius_furo
ENSPMAG00000003938	-	84	82.353	ENSMLUG00000009124	SNRPD1	78	82.353	Myotis_lucifugus
ENSPMAG00000003938	-	85	82.692	ENSNGAG00000023946	Snrpd1	86	82.692	Nannospalax_galili
ENSPMAG00000003938	-	79	83.333	ENSNBRG00000012119	snrpd1	79	82.474	Neolamprologus_brichardi
ENSPMAG00000003938	-	85	80.769	ENSNLEG00000031430	SNRPD1	85	80.769	Nomascus_leucogenys
ENSPMAG00000003938	-	85	82.692	ENSODEG00000005764	SNRPD1	86	82.692	Octodon_degus
ENSPMAG00000003938	-	85	82.692	ENSONIG00000002486	snrpd1	86	82.692	Oreochromis_niloticus
ENSPMAG00000003938	-	82	80.000	ENSOANG00000004638	-	82	80.000	Ornithorhynchus_anatinus
ENSPMAG00000003938	-	85	81.731	ENSOCUG00000014399	-	86	81.731	Oryctolagus_cuniculus
ENSPMAG00000003938	-	84	81.373	ENSOCUG00000023761	-	85	81.373	Oryctolagus_cuniculus
ENSPMAG00000003938	-	80	82.474	ENSORLG00000012516	snrpd1	85	82.474	Oryzias_latipes
ENSPMAG00000003938	-	85	82.692	ENSORLG00020005743	snrpd1	86	82.692	Oryzias_latipes_hni
ENSPMAG00000003938	-	85	82.692	ENSORLG00015013402	snrpd1	86	82.692	Oryzias_latipes_hsok
ENSPMAG00000003938	-	85	82.692	ENSOMEG00000011571	snrpd1	86	82.692	Oryzias_melastigma
ENSPMAG00000003938	-	85	79.808	ENSOGAG00000007833	SNRPD1	84	81.373	Otolemur_garnettii
ENSPMAG00000003938	-	85	82.692	ENSOARG00000003413	-	77	82.692	Ovis_aries
ENSPMAG00000003938	-	85	82.692	ENSPPAG00000042593	SNRPD1	86	82.692	Pan_paniscus
ENSPMAG00000003938	-	85	82.692	ENSPPRG00000002399	SNRPD1	86	82.692	Panthera_pardus
ENSPMAG00000003938	-	85	58.654	ENSPPRG00000005009	-	82	58.654	Panthera_pardus
ENSPMAG00000003938	-	81	82.828	ENSPTIG00000013206	SNRPD1	85	82.828	Panthera_tigris_altaica
ENSPMAG00000003938	-	85	82.692	ENSPTRG00000009909	SNRPD1	86	82.692	Pan_troglodytes
ENSPMAG00000003938	-	85	80.769	ENSPTRG00000050159	-	87	80.769	Pan_troglodytes
ENSPMAG00000003938	-	85	82.692	ENSPANG00000023478	SNRPD1	86	82.692	Papio_anubis
ENSPMAG00000003938	-	80	82.474	ENSPKIG00000021610	snrpd1	85	82.474	Paramormyrops_kingsleyae
ENSPMAG00000003938	-	85	81.731	ENSPKIG00000003985	SNRPD1	86	81.731	Paramormyrops_kingsleyae
ENSPMAG00000003938	-	85	82.692	ENSPMGG00000001862	snrpd1	86	82.692	Periophthalmus_magnuspinnatus
ENSPMAG00000003938	-	85	82.692	ENSPEMG00000014773	-	86	82.692	Peromyscus_maniculatus_bairdii
ENSPMAG00000003938	-	85	82.692	ENSPCIG00000020320	SNRPD1	86	82.692	Phascolarctos_cinereus
ENSPMAG00000003938	-	85	82.692	ENSPFOG00000012448	SNRPD1	90	82.692	Poecilia_formosa
ENSPMAG00000003938	-	85	82.692	ENSPLAG00000006738	snrpd1	90	82.692	Poecilia_latipinna
ENSPMAG00000003938	-	85	82.692	ENSPMEG00000021942	snrpd1	90	82.692	Poecilia_mexicana
ENSPMAG00000003938	-	85	82.692	ENSPREG00000007094	snrpd1	86	82.692	Poecilia_reticulata
ENSPMAG00000003938	-	85	82.692	ENSPPYG00000025874	SNRPD1	86	82.692	Pongo_abelii
ENSPMAG00000003938	-	85	82.692	ENSPCOG00000013327	SNRPD1	86	82.692	Propithecus_coquereli
ENSPMAG00000003938	-	85	82.692	ENSPVAG00000005511	SNRPD1	68	82.692	Pteropus_vampyrus
ENSPMAG00000003938	-	85	83.654	ENSPNAG00000017824	snrpd1	86	83.654	Pygocentrus_nattereri
ENSPMAG00000003938	-	85	82.692	ENSRNOG00000013714	Snrpd1	86	82.692	Rattus_norvegicus
ENSPMAG00000003938	-	85	82.692	ENSRBIG00000022996	SNRPD1	86	82.692	Rhinopithecus_bieti
ENSPMAG00000003938	-	85	82.692	ENSRROG00000027640	SNRPD1	86	82.692	Rhinopithecus_roxellana
ENSPMAG00000003938	-	85	82.692	ENSSBOG00000020998	SNRPD1	86	82.692	Saimiri_boliviensis_boliviensis
ENSPMAG00000003938	-	85	82.692	ENSSHAG00000011791	SNRPD1	86	82.692	Sarcophilus_harrisii
ENSPMAG00000003938	-	85	83.654	ENSSFOG00015022253	-	86	83.654	Scleropages_formosus
ENSPMAG00000003938	-	85	83.654	ENSSFOG00015008809	-	86	83.654	Scleropages_formosus
ENSPMAG00000003938	-	85	82.692	ENSSMAG00000008765	snrpd1	86	82.692	Scophthalmus_maximus
ENSPMAG00000003938	-	83	81.188	ENSSDUG00000010521	snrpd1	83	82.000	Seriola_dumerili
ENSPMAG00000003938	-	85	82.692	ENSSLDG00000011858	snrpd1	86	82.692	Seriola_lalandi_dorsalis
ENSPMAG00000003938	-	57	85.507	ENSSARG00000004271	SNRPD1	100	85.507	Sorex_araneus
ENSPMAG00000003938	-	85	82.692	ENSSPUG00000002824	SNRPD1	86	82.692	Sphenodon_punctatus
ENSPMAG00000003938	-	80	82.474	ENSSPAG00000015229	snrpd1	85	82.474	Stegastes_partitus
ENSPMAG00000003938	-	85	82.692	ENSSSCG00000003701	SNRPD1	86	82.692	Sus_scrofa
ENSPMAG00000003938	-	84	81.373	ENSTGUG00000005095	SNRPD1	84	81.373	Taeniopygia_guttata
ENSPMAG00000003938	-	80	82.474	ENSTRUG00000008977	snrpd1	85	82.474	Takifugu_rubripes
ENSPMAG00000003938	-	72	76.136	ENSTNIG00000001224	snrpd1	83	76.136	Tetraodon_nigroviridis
ENSPMAG00000003938	-	58	80.282	ENSTBEG00000013776	SNRPD1	81	80.282	Tupaia_belangeri
ENSPMAG00000003938	-	82	83.000	ENSTTRG00000002654	SNRPD1	85	83.000	Tursiops_truncatus
ENSPMAG00000003938	-	81	82.828	ENSUAMG00000013431	SNRPD1	95	82.474	Ursus_americanus
ENSPMAG00000003938	-	85	82.692	ENSUMAG00000019740	SNRPD1	86	82.692	Ursus_maritimus
ENSPMAG00000003938	-	85	82.692	ENSVPAG00000010056	SNRPD1	68	82.692	Vicugna_pacos
ENSPMAG00000003938	-	80	82.474	ENSVVUG00000004009	SNRPD1	85	82.474	Vulpes_vulpes
ENSPMAG00000003938	-	85	82.692	ENSXETG00000027354	snrpd1	86	82.692	Xenopus_tropicalis
ENSPMAG00000003938	-	85	82.692	ENSXCOG00000020108	snrpd1	86	82.692	Xiphophorus_couchianus
ENSPMAG00000003938	-	85	82.692	ENSXMAG00000003368	snrpd1	86	82.692	Xiphophorus_maculatus