EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004000 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 4851 bases
Position: chrGL477858:180597-185447
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004365	zf-met	PF12874.7	6.7e-13	1	2
ENSPMAP00000004365	zf-met	PF12874.7	6.7e-13	2	2
ENSPMAP00000004361	zf-met	PF12874.7	6.9e-13	1	2
ENSPMAP00000004361	zf-met	PF12874.7	6.9e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004378	-	582	-	ENSPMAP00000004361	194 (aa)	-	S4RGM9
ENSPMAT00000004382	-	579	-	ENSPMAP00000004365	193 (aa)	-	S4RGN3

Gene Model

Click here to download ENSPMAG00000004000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004000	-	100	43.299	ENSPMAG00000005906	znf385b	62	40.000
ENSPMAG00000004000	-	71	32.667	ENSPMAG00000004582	zmat4a	59	32.667
ENSPMAG00000004000	-	100	41.038	ENSPMAG00000002991	-	59	41.038
ENSPMAG00000004000	-	100	37.037	ENSPMAG00000000983	znf385c	57	36.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004000	-	100	44.724	ENSG00000144331	ZNF385B	75	45.024	Homo_sapiens
ENSPMAG00000004000	-	100	47.030	ENSAMEG00000000330	ZNF385B	51	47.030	Ailuropoda_melanoleuca
ENSPMAG00000004000	-	100	43.077	ENSAOCG00000023028	-	69	43.878	Amphiprion_ocellaris
ENSPMAG00000004000	-	100	47.115	ENSACAG00000017419	ZNF385B	51	47.115	Anolis_carolinensis
ENSPMAG00000004000	-	100	44.762	ENSANAG00000024683	ZNF385B	50	46.500	Aotus_nancymaae
ENSPMAG00000004000	-	100	44.898	ENSACLG00000025387	znf385b	55	38.824	Astatotilapia_calliptera
ENSPMAG00000004000	-	100	44.762	ENSCJAG00000021534	ZNF385B	54	46.500	Callithrix_jacchus
ENSPMAG00000004000	-	100	46.500	ENSTSYG00000012455	ZNF385B	54	46.500	Carlito_syrichta
ENSPMAG00000004000	-	100	44.878	ENSCAPG00000006989	ZNF385B	51	46.569	Cavia_aperea
ENSPMAG00000004000	-	100	44.878	ENSCPOG00000014985	ZNF385B	54	46.569	Cavia_porcellus
ENSPMAG00000004000	-	100	44.762	ENSCCAG00000036046	ZNF385B	54	46.500	Cebus_capucinus
ENSPMAG00000004000	-	100	45.226	ENSCATG00000024097	ZNF385B	50	45.498	Cercocebus_atys
ENSPMAG00000004000	-	100	47.143	ENSCLAG00000014955	-	54	47.143	Chinchilla_lanigera
ENSPMAG00000004000	-	100	45.673	ENSCSAG00000012932	ZNF385B	54	45.972	Chlorocebus_sabaeus
ENSPMAG00000004000	-	100	47.549	ENSCHOG00000011835	ZNF385B	50	48.259	Choloepus_hoffmanni
ENSPMAG00000004000	-	100	45.226	ENSCANG00000001510	ZNF385B	54	45.498	Colobus_angolensis_palliatus
ENSPMAG00000004000	-	100	46.231	ENSCGRG00001019414	Zfp385b	50	46.231	Cricetulus_griseus_chok1gshd
ENSPMAG00000004000	-	100	46.231	ENSCGRG00000003988	Zfp385b	54	46.231	Cricetulus_griseus_crigri
ENSPMAG00000004000	-	98	46.000	ENSDNOG00000019250	-	67	46.734	Dasypus_novemcinctus
ENSPMAG00000004000	-	97	31.959	ENSDNOG00000044257	-	53	33.503	Dasypus_novemcinctus
ENSPMAG00000004000	-	100	34.518	ENSEBUG00000014383	-	52	33.333	Eptatretus_burgeri
ENSPMAG00000004000	-	70	34.868	ENSEBUG00000002213	-	61	35.849	Eptatretus_burgeri
ENSPMAG00000004000	-	100	39.706	ENSEBUG00000009311	ZNF385B	70	39.706	Eptatretus_burgeri
ENSPMAG00000004000	-	93	32.110	ENSEBUG00000016569	-	60	32.432	Eptatretus_burgeri
ENSPMAG00000004000	-	100	42.661	ENSEBUG00000006559	znf385b	52	42.661	Eptatretus_burgeri
ENSPMAG00000004000	-	100	45.226	ENSEASG00005022300	ZNF385B	50	45.226	Equus_asinus_asinus
ENSPMAG00000004000	-	100	45.226	ENSECAG00000000538	ZNF385B	51	45.226	Equus_caballus
ENSPMAG00000004000	-	100	47.030	ENSFCAG00000026511	ZNF385B	54	47.030	Felis_catus
ENSPMAG00000004000	-	100	48.980	ENSGALG00000011283	-	50	48.980	Gallus_gallus
ENSPMAG00000004000	-	100	47.500	ENSGALG00000009012	ZNF385B	51	47.500	Gallus_gallus
ENSPMAG00000004000	-	100	41.837	ENSGAFG00000021154	znf385b	65	41.837	Gambusia_affinis
ENSPMAG00000004000	-	100	45.238	ENSGAGG00000007880	ZNF385B	53	45.714	Gopherus_agassizii
ENSPMAG00000004000	-	100	45.226	ENSGGOG00000008716	ZNF385B	54	45.498	Gorilla_gorilla
ENSPMAG00000004000	-	100	46.117	ENSHGLG00000004054	ZNF385B	54	46.117	Heterocephalus_glaber_female
ENSPMAG00000004000	-	100	46.117	ENSHGLG00100011134	ZNF385B	54	46.117	Heterocephalus_glaber_male
ENSPMAG00000004000	-	99	39.175	ENSHCOG00000004144	-	59	40.206	Hippocampus_comes
ENSPMAG00000004000	-	100	46.117	ENSSTOG00000009646	ZNF385B	54	46.117	Ictidomys_tridecemlineatus
ENSPMAG00000004000	-	100	46.040	ENSJJAG00000011065	Zfp385b	55	47.525	Jaculus_jaculus
ENSPMAG00000004000	-	54	60.748	ENSKMAG00000005260	-	54	39.837	Kryptolebias_marmoratus
ENSPMAG00000004000	-	100	45.813	ENSLACG00000010531	ZNF385B	51	45.813	Latimeria_chalumnae
ENSPMAG00000004000	-	50	64.286	ENSLOCG00000006712	-	58	47.000	Lepisosteus_oculatus
ENSPMAG00000004000	-	100	45.226	ENSMFAG00000043013	ZNF385B	54	45.498	Macaca_fascicularis
ENSPMAG00000004000	-	100	45.226	ENSMMUG00000003855	ZNF385B	54	45.498	Macaca_mulatta
ENSPMAG00000004000	-	100	45.226	ENSMNEG00000033615	ZNF385B	54	45.498	Macaca_nemestrina
ENSPMAG00000004000	-	100	45.226	ENSMLEG00000034603	ZNF385B	54	45.498	Mandrillus_leucophaeus
ENSPMAG00000004000	-	100	47.783	ENSMGAG00000009267	ZNF385B	51	47.783	Meleagris_gallopavo
ENSPMAG00000004000	-	100	47.826	ENSMAUG00000017440	Zfp385b	54	47.826	Mesocricetus_auratus
ENSPMAG00000004000	-	100	46.000	ENSMICG00000016924	ZNF385B	54	46.000	Microcebus_murinus
ENSPMAG00000004000	-	100	46.231	ENSMOCG00000006938	Zfp385b	54	46.231	Microtus_ochrogaster
ENSPMAG00000004000	-	100	49.510	ENSMODG00000010201	ZNF385B	51	49.510	Monodelphis_domestica
ENSPMAG00000004000	-	100	47.059	MGP_CAROLIEiJ_G0023695	Zfp385b	54	47.059	Mus_caroli
ENSPMAG00000004000	-	100	47.059	ENSMUSG00000027016	Zfp385b	54	47.059	Mus_musculus
ENSPMAG00000004000	-	100	45.274	MGP_PahariEiJ_G0025146	Zfp385b	54	43.192	Mus_pahari
ENSPMAG00000004000	-	100	47.059	MGP_SPRETEiJ_G0024616	Zfp385b	54	47.059	Mus_spretus
ENSPMAG00000004000	-	100	44.907	ENSMLUG00000013424	ZNF385B	51	46.154	Myotis_lucifugus
ENSPMAG00000004000	-	100	44.286	ENSNGAG00000010574	Zfp385b	54	44.286	Nannospalax_galili
ENSPMAG00000004000	-	100	46.766	ENSNLEG00000006238	ZNF385B	54	45.498	Nomascus_leucogenys
ENSPMAG00000004000	-	99	47.500	ENSODEG00000012465	ZNF385B	55	47.500	Octodon_degus
ENSPMAG00000004000	-	100	46.231	ENSOCUG00000004877	ZNF385B	51	47.000	Oryctolagus_cuniculus
ENSPMAG00000004000	-	100	40.704	ENSOMEG00000015261	znf385b	53	37.975	Oryzias_melastigma
ENSPMAG00000004000	-	100	45.729	ENSOARG00000016924	ZNF385B	51	45.729	Ovis_aries
ENSPMAG00000004000	-	100	45.226	ENSPPAG00000035510	ZNF385B	54	45.498	Pan_paniscus
ENSPMAG00000004000	-	100	45.500	ENSPPRG00000001753	ZNF385B	54	45.500	Panthera_pardus
ENSPMAG00000004000	-	100	45.226	ENSPTRG00000012696	ZNF385B	54	45.498	Pan_troglodytes
ENSPMAG00000004000	-	100	45.226	ENSPANG00000004252	ZNF385B	50	45.498	Papio_anubis
ENSPMAG00000004000	-	100	48.131	ENSPKIG00000021255	znf385b	69	47.739	Paramormyrops_kingsleyae
ENSPMAG00000004000	-	100	46.000	ENSPEMG00000011546	Zfp385b	54	44.550	Peromyscus_maniculatus_bairdii
ENSPMAG00000004000	-	100	50.490	ENSPCIG00000011178	ZNF385B	50	50.490	Phascolarctos_cinereus
ENSPMAG00000004000	-	100	44.000	ENSPREG00000004272	znf385b	66	44.000	Poecilia_reticulata
ENSPMAG00000004000	-	100	46.000	ENSPCOG00000024514	ZNF385B	54	46.000	Propithecus_coquereli
ENSPMAG00000004000	-	100	46.396	ENSPNAG00000024711	znf385b	69	45.205	Pygocentrus_nattereri
ENSPMAG00000004000	-	100	46.569	ENSRNOG00000019065	Zfp385b	50	46.569	Rattus_norvegicus
ENSPMAG00000004000	-	100	45.226	ENSRBIG00000043516	ZNF385B	54	45.498	Rhinopithecus_bieti
ENSPMAG00000004000	-	100	45.226	ENSRROG00000003706	ZNF385B	54	45.498	Rhinopithecus_roxellana
ENSPMAG00000004000	-	100	44.762	ENSSBOG00000033350	ZNF385B	54	46.500	Saimiri_boliviensis_boliviensis
ENSPMAG00000004000	-	100	50.000	ENSSHAG00000015010	ZNF385B	59	50.000	Sarcophilus_harrisii
ENSPMAG00000004000	-	100	41.837	ENSSFOG00015014622	-	51	41.837	Scleropages_formosus
ENSPMAG00000004000	-	100	47.059	ENSSFOG00015021104	-	60	47.059	Scleropages_formosus
ENSPMAG00000004000	-	51	63.366	ENSSMAG00000004759	znf385b	50	46.939	Scophthalmus_maximus
ENSPMAG00000004000	-	100	44.608	ENSSPUG00000006364	ZNF385B	51	44.608	Sphenodon_punctatus
ENSPMAG00000004000	-	100	43.284	ENSTNIG00000005547	znf385b	58	42.365	Tetraodon_nigroviridis
ENSPMAG00000004000	-	100	46.305	ENSTBEG00000013865	ZNF385B	50	46.305	Tupaia_belangeri
ENSPMAG00000004000	-	100	47.500	ENSUMAG00000016683	ZNF385B	56	47.500	Ursus_maritimus
ENSPMAG00000004000	-	100	46.500	ENSVVUG00000009783	ZNF385B	53	46.500	Vulpes_vulpes
ENSPMAG00000004000	-	100	47.761	ENSXETG00000015059	znf385b	51	47.761	Xenopus_tropicalis
ENSPMAG00000004000	-	100	64.130	ENSXCOG00000018547	-	73	45.641	Xiphophorus_couchianus