EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 19143 bases
Position: chrGL481383:3055-22197
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004459	DEAD	PF00270.29	5.7e-10	1	1
ENSPMAP00000004459	HA2	PF04408.23	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004476	-	1704	-	ENSPMAP00000004459	568 (aa)	-	S4RGX7

Gene Model

Click here to download ENSPMAG00000004056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004056	-	74	34.132	ENSPMAG00000000247	dqx1	80	34.132
ENSPMAG00000004056	-	87	40.476	ENSPMAG00000001726	dhx8	64	40.476

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004056	-	100	69.542	ENSG00000174953	DHX36	99	70.000	Homo_sapiens
ENSPMAG00000004056	-	100	69.110	ENSAPOG00000022391	dhx36	58	69.110	Acanthochromis_polyacanthus
ENSPMAG00000004056	-	100	70.423	ENSAMEG00000011721	DHX36	56	70.423	Ailuropoda_melanoleuca
ENSPMAG00000004056	-	100	68.541	ENSACIG00000016290	dhx36	66	68.541	Amphilophus_citrinellus
ENSPMAG00000004056	-	100	69.110	ENSAOCG00000000046	dhx36	54	69.110	Amphiprion_ocellaris
ENSPMAG00000004056	-	100	69.110	ENSAPEG00000001495	dhx36	54	69.110	Amphiprion_percula
ENSPMAG00000004056	-	100	69.284	ENSATEG00000015441	dhx36	66	69.164	Anabas_testudineus
ENSPMAG00000004056	-	100	71.127	ENSAPLG00000012597	DHX36	61	71.127	Anas_platyrhynchos
ENSPMAG00000004056	-	100	61.821	ENSACAG00000006905	DHX36	57	61.620	Anolis_carolinensis
ENSPMAG00000004056	-	100	70.070	ENSANAG00000020741	DHX36	61	70.070	Aotus_nancymaae
ENSPMAG00000004056	-	100	68.935	ENSACLG00000014163	dhx36	63	68.761	Astatotilapia_calliptera
ENSPMAG00000004056	-	100	67.895	ENSAMXG00000017365	dhx36	63	67.895	Astyanax_mexicanus
ENSPMAG00000004056	-	100	70.070	ENSBTAG00000006142	DHX36	56	70.070	Bos_taurus
ENSPMAG00000004056	-	100	69.894	ENSCJAG00000000986	DHX36	56	69.894	Callithrix_jacchus
ENSPMAG00000004056	-	100	70.423	ENSCAFG00000008673	DHX36	51	70.423	Canis_familiaris
ENSPMAG00000004056	-	100	70.423	ENSCAFG00020004966	DHX36	71	70.423	Canis_lupus_dingo
ENSPMAG00000004056	-	100	69.894	ENSCHIG00000017463	DHX36	56	69.894	Capra_hircus
ENSPMAG00000004056	-	100	69.542	ENSTSYG00000002377	DHX36	56	69.542	Carlito_syrichta
ENSPMAG00000004056	-	80	63.297	ENSCAPG00000006238	DHX36	52	63.297	Cavia_aperea
ENSPMAG00000004056	-	83	67.660	ENSCPOG00000007716	DHX36	51	67.660	Cavia_porcellus
ENSPMAG00000004056	-	100	67.782	ENSCCAG00000035199	DHX36	56	67.782	Cebus_capucinus
ENSPMAG00000004056	-	100	69.718	ENSCATG00000037545	DHX36	56	69.718	Cercocebus_atys
ENSPMAG00000004056	-	100	69.366	ENSCLAG00000003610	DHX36	57	69.366	Chinchilla_lanigera
ENSPMAG00000004056	-	100	69.542	ENSCSAG00000011962	DHX36	56	69.542	Chlorocebus_sabaeus
ENSPMAG00000004056	-	98	62.007	ENSCHOG00000002340	DHX36	60	62.007	Choloepus_hoffmanni
ENSPMAG00000004056	-	100	71.479	ENSCPBG00000018783	DHX36	58	71.479	Chrysemys_picta_bellii
ENSPMAG00000004056	-	88	67.241	ENSCING00000002018	-	93	67.241	Ciona_intestinalis
ENSPMAG00000004056	-	100	51.111	ENSCSAVG00000008110	-	71	51.111	Ciona_savignyi
ENSPMAG00000004056	-	100	69.542	ENSCANG00000040120	DHX36	56	69.542	Colobus_angolensis_palliatus
ENSPMAG00000004056	-	100	69.366	ENSCGRG00001013722	Dhx36	56	69.366	Cricetulus_griseus_chok1gshd
ENSPMAG00000004056	-	100	69.366	ENSCGRG00000005229	Dhx36	58	69.366	Cricetulus_griseus_crigri
ENSPMAG00000004056	-	100	65.997	ENSCSEG00000013424	dhx36	56	65.997	Cynoglossus_semilaevis
ENSPMAG00000004056	-	100	68.014	ENSCVAG00000005470	dhx36	53	68.014	Cyprinodon_variegatus
ENSPMAG00000004056	-	100	64.261	ENSDARG00000101059	dhx36	56	64.261	Danio_rerio
ENSPMAG00000004056	-	100	70.246	ENSDORG00000004848	Dhx36	59	70.246	Dipodomys_ordii
ENSPMAG00000004056	-	99	44.056	FBgn0032883	Rhau	59	44.231	Drosophila_melanogaster
ENSPMAG00000004056	-	92	60.421	ENSETEG00000009104	DHX36	53	60.421	Echinops_telfairi
ENSPMAG00000004056	-	88	63.871	ENSEBUG00000005040	-	59	63.871	Eptatretus_burgeri
ENSPMAG00000004056	-	100	70.070	ENSEASG00005020682	DHX36	55	70.070	Equus_asinus_asinus
ENSPMAG00000004056	-	100	68.662	ENSECAG00000025100	DHX36	55	68.662	Equus_caballus
ENSPMAG00000004056	-	100	69.542	ENSEEUG00000010430	DHX36	56	69.542	Erinaceus_europaeus
ENSPMAG00000004056	-	100	67.539	ENSELUG00000009181	dhx36	60	67.539	Esox_lucius
ENSPMAG00000004056	-	100	70.599	ENSFCAG00000004860	DHX36	56	70.599	Felis_catus
ENSPMAG00000004056	-	100	70.246	ENSFALG00000005045	DHX36	61	70.246	Ficedula_albicollis
ENSPMAG00000004056	-	100	69.366	ENSFDAG00000005896	DHX36	56	69.366	Fukomys_damarensis
ENSPMAG00000004056	-	100	63.525	ENSFHEG00000000896	dhx36	54	63.525	Fundulus_heteroclitus
ENSPMAG00000004056	-	99	69.435	ENSGMOG00000013947	dhx36	58	69.420	Gadus_morhua
ENSPMAG00000004056	-	100	70.951	ENSGALG00000043082	DHX36	57	70.951	Gallus_gallus
ENSPMAG00000004056	-	100	68.761	ENSGAFG00000013829	dhx36	62	66.667	Gambusia_affinis
ENSPMAG00000004056	-	100	68.893	ENSGACG00000010276	dhx36	56	68.893	Gasterosteus_aculeatus
ENSPMAG00000004056	-	100	71.655	ENSGAGG00000000294	DHX36	61	71.655	Gopherus_agassizii
ENSPMAG00000004056	-	100	69.718	ENSGGOG00000034937	DHX36	56	69.718	Gorilla_gorilla
ENSPMAG00000004056	-	100	69.110	ENSHBUG00000015199	dhx36	63	69.110	Haplochromis_burtoni
ENSPMAG00000004056	-	100	69.014	ENSHGLG00000017407	DHX36	56	69.014	Heterocephalus_glaber_female
ENSPMAG00000004056	-	100	69.014	ENSHGLG00100003204	DHX36	57	69.014	Heterocephalus_glaber_male
ENSPMAG00000004056	-	100	66.492	ENSHCOG00000003686	dhx36	58	66.492	Hippocampus_comes
ENSPMAG00000004056	-	82	75.159	ENSIPUG00000010835	dhx36	50	75.159	Ictalurus_punctatus
ENSPMAG00000004056	-	100	70.070	ENSSTOG00000003917	DHX36	57	70.070	Ictidomys_tridecemlineatus
ENSPMAG00000004056	-	100	69.894	ENSJJAG00000014564	Dhx36	57	69.894	Jaculus_jaculus
ENSPMAG00000004056	-	100	69.947	ENSKMAG00000019498	dhx36	64	63.158	Kryptolebias_marmoratus
ENSPMAG00000004056	-	100	68.366	ENSLBEG00000023465	dhx36	53	68.366	Labrus_bergylta
ENSPMAG00000004056	-	100	70.123	ENSLACG00000016218	DHX36	58	70.123	Latimeria_chalumnae
ENSPMAG00000004056	-	100	68.761	ENSLOCG00000002125	dhx36	57	68.761	Lepisosteus_oculatus
ENSPMAG00000004056	-	100	70.650	ENSLAFG00000015342	DHX36	57	70.650	Loxodonta_africana
ENSPMAG00000004056	-	100	69.718	ENSMFAG00000032288	DHX36	56	69.718	Macaca_fascicularis
ENSPMAG00000004056	-	100	69.718	ENSMMUG00000011347	DHX36	56	69.718	Macaca_mulatta
ENSPMAG00000004056	-	100	69.718	ENSMNEG00000039762	DHX36	56	69.718	Macaca_nemestrina
ENSPMAG00000004056	-	100	69.718	ENSMLEG00000032839	DHX36	56	69.718	Mandrillus_leucophaeus
ENSPMAG00000004056	-	100	67.539	ENSMAMG00000013131	dhx36	65	64.685	Mastacembelus_armatus
ENSPMAG00000004056	-	100	69.110	ENSMZEG00005001607	dhx36	64	69.110	Maylandia_zebra
ENSPMAG00000004056	-	100	70.951	ENSMGAG00000010853	DHX36	66	70.951	Meleagris_gallopavo
ENSPMAG00000004056	-	100	69.542	ENSMAUG00000000158	Dhx36	57	69.542	Mesocricetus_auratus
ENSPMAG00000004056	-	100	70.070	ENSMICG00000049093	DHX36	56	70.070	Microcebus_murinus
ENSPMAG00000004056	-	100	69.366	ENSMOCG00000006684	Dhx36	56	69.366	Microtus_ochrogaster
ENSPMAG00000004056	-	100	67.888	ENSMMOG00000013033	dhx36	63	67.888	Mola_mola
ENSPMAG00000004056	-	100	69.894	ENSMODG00000015820	DHX36	56	69.894	Monodelphis_domestica
ENSPMAG00000004056	-	100	61.806	ENSMALG00000010405	dhx36	53	61.806	Monopterus_albus
ENSPMAG00000004056	-	100	69.014	MGP_CAROLIEiJ_G0025032	Dhx36	57	69.014	Mus_caroli
ENSPMAG00000004056	-	100	69.014	ENSMUSG00000027770	Dhx36	57	69.014	Mus_musculus
ENSPMAG00000004056	-	100	68.838	MGP_PahariEiJ_G0026476	Dhx36	57	68.838	Mus_pahari
ENSPMAG00000004056	-	100	69.190	MGP_SPRETEiJ_G0025972	Dhx36	58	69.190	Mus_spretus
ENSPMAG00000004056	-	100	70.246	ENSMPUG00000002723	DHX36	56	70.246	Mustela_putorius_furo
ENSPMAG00000004056	-	100	69.542	ENSMLUG00000002318	DHX36	56	69.542	Myotis_lucifugus
ENSPMAG00000004056	-	100	69.718	ENSNGAG00000015307	Dhx36	56	69.718	Nannospalax_galili
ENSPMAG00000004056	-	100	68.541	ENSNBRG00000002239	dhx36	63	68.541	Neolamprologus_brichardi
ENSPMAG00000004056	-	100	69.894	ENSNLEG00000003640	DHX36	56	69.894	Nomascus_leucogenys
ENSPMAG00000004056	-	87	56.653	ENSMEUG00000001499	DHX36	52	56.653	Notamacropus_eugenii
ENSPMAG00000004056	-	100	69.190	ENSODEG00000000935	DHX36	57	69.190	Octodon_degus
ENSPMAG00000004056	-	100	69.459	ENSONIG00000003546	dhx36	56	69.338	Oreochromis_niloticus
ENSPMAG00000004056	-	100	70.175	ENSOANG00000007079	-	61	70.175	Ornithorhynchus_anatinus
ENSPMAG00000004056	-	100	69.718	ENSOCUG00000001180	DHX36	56	69.718	Oryctolagus_cuniculus
ENSPMAG00000004056	-	100	68.412	ENSORLG00000005842	dhx36	66	68.237	Oryzias_latipes
ENSPMAG00000004056	-	100	68.412	ENSORLG00020004665	dhx36	66	68.237	Oryzias_latipes_hni
ENSPMAG00000004056	-	100	68.237	ENSORLG00015007188	dhx36	61	68.063	Oryzias_latipes_hsok
ENSPMAG00000004056	-	100	67.539	ENSOMEG00000011032	dhx36	54	67.539	Oryzias_melastigma
ENSPMAG00000004056	-	100	69.366	ENSOGAG00000011256	DHX36	57	69.366	Otolemur_garnettii
ENSPMAG00000004056	-	100	69.894	ENSOARG00000003508	DHX36	53	69.894	Ovis_aries
ENSPMAG00000004056	-	100	69.542	ENSPPAG00000020323	DHX36	56	69.542	Pan_paniscus
ENSPMAG00000004056	-	100	70.423	ENSPPRG00000002879	DHX36	56	70.423	Panthera_pardus
ENSPMAG00000004056	-	100	70.423	ENSPTIG00000018478	DHX36	58	70.423	Panthera_tigris_altaica
ENSPMAG00000004056	-	100	69.366	ENSPTRG00000015548	DHX36	56	69.366	Pan_troglodytes
ENSPMAG00000004056	-	100	69.718	ENSPANG00000007914	DHX36	56	69.718	Papio_anubis
ENSPMAG00000004056	-	100	69.459	ENSPKIG00000009943	dhx36	67	69.459	Paramormyrops_kingsleyae
ENSPMAG00000004056	-	100	71.479	ENSPSIG00000012755	DHX36	62	71.479	Pelodiscus_sinensis
ENSPMAG00000004056	-	100	64.851	ENSPMGG00000013858	dhx36	64	64.851	Periophthalmus_magnuspinnatus
ENSPMAG00000004056	-	100	69.406	ENSPEMG00000010012	Dhx36	57	69.406	Peromyscus_maniculatus_bairdii
ENSPMAG00000004056	-	100	69.542	ENSPCIG00000000045	DHX36	56	69.542	Phascolarctos_cinereus
ENSPMAG00000004056	-	100	68.935	ENSPFOG00000009598	dhx36	53	68.935	Poecilia_formosa
ENSPMAG00000004056	-	100	68.586	ENSPLAG00000011061	dhx36	53	68.586	Poecilia_latipinna
ENSPMAG00000004056	-	100	68.761	ENSPMEG00000008396	dhx36	53	68.761	Poecilia_mexicana
ENSPMAG00000004056	-	100	68.935	ENSPREG00000002966	dhx36	54	68.935	Poecilia_reticulata
ENSPMAG00000004056	-	100	69.542	ENSPPYG00000014222	-	70	69.542	Pongo_abelii
ENSPMAG00000004056	-	64	94.118	ENSPCOG00000011695	-	51	94.118	Propithecus_coquereli
ENSPMAG00000004056	-	100	70.070	ENSPCOG00000028384	-	82	67.209	Propithecus_coquereli
ENSPMAG00000004056	-	100	65.317	ENSPVAG00000008465	DHX36	60	65.317	Pteropus_vampyrus
ENSPMAG00000004056	-	100	68.014	ENSPNAG00000013972	dhx36	56	68.541	Pygocentrus_nattereri
ENSPMAG00000004056	-	100	68.838	ENSRNOG00000014599	Dhx36	57	68.838	Rattus_norvegicus
ENSPMAG00000004056	-	100	64.437	ENSRBIG00000044638	DHX36	55	64.085	Rhinopithecus_bieti
ENSPMAG00000004056	-	100	69.718	ENSRROG00000036472	DHX36	61	69.718	Rhinopithecus_roxellana
ENSPMAG00000004056	-	100	69.718	ENSSBOG00000024666	DHX36	56	69.718	Saimiri_boliviensis_boliviensis
ENSPMAG00000004056	-	100	67.254	ENSSHAG00000016292	DHX36	61	67.254	Sarcophilus_harrisii
ENSPMAG00000004056	-	100	67.888	ENSSFOG00015019533	dhx36	62	67.888	Scleropages_formosus
ENSPMAG00000004056	-	100	67.663	ENSSMAG00000011914	dhx36	58	67.487	Scophthalmus_maximus
ENSPMAG00000004056	-	100	69.808	ENSSDUG00000023657	dhx36	58	67.714	Seriola_dumerili
ENSPMAG00000004056	-	91	61.079	ENSSARG00000006396	-	64	61.079	Sorex_araneus
ENSPMAG00000004056	-	100	69.772	ENSSPUG00000000785	-	66	69.772	Sphenodon_punctatus
ENSPMAG00000004056	-	100	69.284	ENSSPAG00000022168	dhx36	64	69.110	Stegastes_partitus
ENSPMAG00000004056	-	100	69.718	ENSSSCG00000024916	DHX36	62	69.718	Sus_scrofa
ENSPMAG00000004056	-	100	70.423	ENSTGUG00000011317	DHX36	61	70.175	Taeniopygia_guttata
ENSPMAG00000004056	-	100	69.069	ENSTRUG00000001230	dhx36	66	69.069	Takifugu_rubripes
ENSPMAG00000004056	-	100	68.717	ENSTNIG00000007692	dhx36	56	68.717	Tetraodon_nigroviridis
ENSPMAG00000004056	-	100	70.157	ENSTBEG00000013495	DHX36	57	70.157	Tupaia_belangeri
ENSPMAG00000004056	-	100	69.542	ENSTTRG00000016883	DHX36	56	69.542	Tursiops_truncatus
ENSPMAG00000004056	-	100	70.423	ENSUAMG00000017002	DHX36	59	70.423	Ursus_americanus
ENSPMAG00000004056	-	100	70.423	ENSUMAG00000011908	DHX36	62	70.423	Ursus_maritimus
ENSPMAG00000004056	-	100	65.141	ENSVPAG00000004046	DHX36	56	65.141	Vicugna_pacos
ENSPMAG00000004056	-	100	70.423	ENSVVUG00000024516	DHX36	56	70.423	Vulpes_vulpes
ENSPMAG00000004056	-	100	68.531	ENSXETG00000007768	dhx36	57	68.531	Xenopus_tropicalis
ENSPMAG00000004056	-	100	67.714	ENSXCOG00000011687	dhx36	55	67.714	Xiphophorus_couchianus
ENSPMAG00000004056	-	100	69.110	ENSXMAG00000001490	dhx36	63	63.605	Xiphophorus_maculatus