EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004189 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 1074 bases
Position: chrGL476524:167506-168579
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004592	zf-C2H2	PF00096.26	3.8e-37	1	6
ENSPMAP00000004592	zf-C2H2	PF00096.26	3.8e-37	2	6
ENSPMAP00000004592	zf-C2H2	PF00096.26	3.8e-37	3	6
ENSPMAP00000004592	zf-C2H2	PF00096.26	3.8e-37	4	6
ENSPMAP00000004592	zf-C2H2	PF00096.26	3.8e-37	5	6
ENSPMAP00000004592	zf-C2H2	PF00096.26	3.8e-37	6	6
ENSPMAP00000004592	zf-met	PF12874.7	1.4e-12	1	2
ENSPMAP00000004592	zf-met	PF12874.7	1.4e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004611	-	765	-	ENSPMAP00000004592	255 (aa)	-	S4RHB0

Gene Model

Click here to download ENSPMAG00000004189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004189	-	85	41.111	ENSPMAG00000000839	-	94	41.111
ENSPMAG00000004189	-	98	38.760	ENSPMAG00000003606	-	71	38.760
ENSPMAG00000004189	-	96	34.286	ENSPMAG00000008879	-	98	34.286
ENSPMAG00000004189	-	96	34.615	ENSPMAG00000006066	znf366	94	35.714
ENSPMAG00000004189	-	98	34.028	ENSPMAG00000008196	-	100	34.028
ENSPMAG00000004189	-	97	32.683	ENSPMAG00000006198	ZBTB47	61	35.625
ENSPMAG00000004189	-	98	38.060	ENSPMAG00000007492	-	86	38.060
ENSPMAG00000004189	-	98	31.048	ENSPMAG00000009794	PRDM15	58	36.842
ENSPMAG00000004189	-	98	30.286	ENSPMAG00000002022	-	100	32.215
ENSPMAG00000004189	-	93	33.028	ENSPMAG00000004866	-	50	32.000
ENSPMAG00000004189	-	99	35.119	ENSPMAG00000007983	-	97	37.349
ENSPMAG00000004189	-	98	33.878	ENSPMAG00000001294	-	100	35.242
ENSPMAG00000004189	-	98	40.000	ENSPMAG00000007084	-	100	40.000
ENSPMAG00000004189	-	94	35.185	ENSPMAG00000008691	-	95	35.185
ENSPMAG00000004189	-	99	37.209	ENSPMAG00000004710	znf236	54	37.209
ENSPMAG00000004189	-	96	33.624	ENSPMAG00000000706	-	100	32.906
ENSPMAG00000004189	-	98	33.918	ENSPMAG00000004344	-	93	38.938
ENSPMAG00000004189	-	98	36.517	ENSPMAG00000006708	-	97	36.517
ENSPMAG00000004189	-	99	35.294	ENSPMAG00000005248	prdm5	99	36.842
ENSPMAG00000004189	-	98	35.443	ENSPMAG00000000404	-	93	35.606
ENSPMAG00000004189	-	98	35.648	ENSPMAG00000000401	-	88	35.648
ENSPMAG00000004189	-	98	34.314	ENSPMAG00000007731	-	94	35.233
ENSPMAG00000004189	-	98	37.104	ENSPMAG00000007500	ZNF436	99	36.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004189	-	99	36.567	ENSAPOG00000008319	-	57	36.567	Acanthochromis_polyacanthus
ENSPMAG00000004189	-	98	32.547	ENSACIG00000017892	-	80	32.547	Amphilophus_citrinellus
ENSPMAG00000004189	-	98	39.516	ENSACIG00000004641	-	52	39.516	Amphilophus_citrinellus
ENSPMAG00000004189	-	80	33.083	ENSACIG00000006826	-	59	33.083	Amphilophus_citrinellus
ENSPMAG00000004189	-	98	37.500	ENSACIG00000007464	-	56	37.500	Amphilophus_citrinellus
ENSPMAG00000004189	-	91	34.146	ENSACIG00000002944	-	92	33.065	Amphilophus_citrinellus
ENSPMAG00000004189	-	91	36.567	ENSAOCG00000015944	-	61	36.567	Amphiprion_ocellaris
ENSPMAG00000004189	-	96	33.529	ENSAOCG00000014769	-	67	34.320	Amphiprion_ocellaris
ENSPMAG00000004189	-	99	34.211	ENSAOCG00000016897	-	67	33.091	Amphiprion_ocellaris
ENSPMAG00000004189	-	97	32.847	ENSAOCG00000001325	-	63	32.847	Amphiprion_ocellaris
ENSPMAG00000004189	-	99	34.659	ENSAPEG00000010013	-	56	36.047	Amphiprion_percula
ENSPMAG00000004189	-	99	34.211	ENSAPEG00000001556	-	62	36.316	Amphiprion_percula
ENSPMAG00000004189	-	98	33.684	ENSATEG00000018931	-	95	33.684	Anabas_testudineus
ENSPMAG00000004189	-	70	40.541	ENSACLG00000019154	-	84	40.541	Astatotilapia_calliptera
ENSPMAG00000004189	-	87	42.353	ENSACLG00000011658	-	79	42.353	Astatotilapia_calliptera
ENSPMAG00000004189	-	98	32.500	ENSAMXG00000029518	-	70	32.500	Astyanax_mexicanus
ENSPMAG00000004189	-	98	35.374	ENSCING00000002128	zf(c2h2)-35	64	35.374	Ciona_intestinalis
ENSPMAG00000004189	-	96	38.739	ENSCSEG00000010264	-	65	38.393	Cynoglossus_semilaevis
ENSPMAG00000004189	-	94	42.945	ENSCSEG00000010453	-	57	44.156	Cynoglossus_semilaevis
ENSPMAG00000004189	-	94	41.250	ENSCSEG00000015593	-	74	41.250	Cynoglossus_semilaevis
ENSPMAG00000004189	-	85	37.805	ENSCVAG00000020141	-	63	37.805	Cyprinodon_variegatus
ENSPMAG00000004189	-	98	35.897	ENSCVAG00000003250	-	67	34.615	Cyprinodon_variegatus
ENSPMAG00000004189	-	99	35.938	ENSCVAG00000006653	-	62	36.813	Cyprinodon_variegatus
ENSPMAG00000004189	-	98	39.041	ENSCVAG00000015616	-	73	39.041	Cyprinodon_variegatus
ENSPMAG00000004189	-	92	35.354	ENSCVAG00000012682	-	60	35.354	Cyprinodon_variegatus
ENSPMAG00000004189	-	96	33.607	ENSEBUG00000002290	-	55	35.149	Eptatretus_burgeri
ENSPMAG00000004189	-	99	36.250	ENSEBUG00000007931	-	78	36.250	Eptatretus_burgeri
ENSPMAG00000004189	-	96	32.701	ENSELUG00000001909	-	78	32.353	Esox_lucius
ENSPMAG00000004189	-	98	40.566	ENSELUG00000024007	-	64	36.250	Esox_lucius
ENSPMAG00000004189	-	99	36.893	ENSGAFG00000008204	-	66	36.893	Gambusia_affinis
ENSPMAG00000004189	-	97	39.535	ENSGAFG00000001879	-	56	39.535	Gambusia_affinis
ENSPMAG00000004189	-	99	32.627	ENSHBUG00000006656	-	53	33.636	Haplochromis_burtoni
ENSPMAG00000004189	-	98	37.234	ENSHCOG00000015497	-	73	37.234	Hippocampus_comes
ENSPMAG00000004189	-	99	37.853	ENSHCOG00000001873	-	64	37.853	Hippocampus_comes
ENSPMAG00000004189	-	87	38.202	ENSHCOG00000020670	-	73	38.202	Hippocampus_comes
ENSPMAG00000004189	-	99	37.853	ENSHCOG00000008550	-	64	37.853	Hippocampus_comes
ENSPMAG00000004189	-	98	35.897	ENSHCOG00000013489	-	90	34.742	Hippocampus_comes
ENSPMAG00000004189	-	58	35.780	ENSIPUG00000013083	-	51	31.532	Ictalurus_punctatus
ENSPMAG00000004189	-	98	36.478	ENSKMAG00000007699	-	64	36.478	Kryptolebias_marmoratus
ENSPMAG00000004189	-	92	32.727	ENSKMAG00000014184	-	53	32.727	Kryptolebias_marmoratus
ENSPMAG00000004189	-	98	35.616	ENSLBEG00000007106	-	64	35.616	Labrus_bergylta
ENSPMAG00000004189	-	99	30.769	ENSLBEG00000006161	-	80	30.178	Labrus_bergylta
ENSPMAG00000004189	-	97	36.548	ENSLBEG00000017424	-	97	36.548	Labrus_bergylta
ENSPMAG00000004189	-	99	32.353	ENSLBEG00000011210	-	53	32.353	Labrus_bergylta
ENSPMAG00000004189	-	98	35.659	ENSLBEG00000001132	-	76	35.821	Labrus_bergylta
ENSPMAG00000004189	-	98	36.957	ENSLOCG00000004208	-	99	32.377	Lepisosteus_oculatus
ENSPMAG00000004189	-	98	39.394	ENSMAMG00000017939	-	80	39.394	Mastacembelus_armatus
ENSPMAG00000004189	-	98	31.953	ENSMZEG00005013907	-	77	34.667	Maylandia_zebra
ENSPMAG00000004189	-	60	45.833	ENSMMOG00000013330	-	59	45.833	Mola_mola
ENSPMAG00000004189	-	95	37.799	ENSMALG00000004279	-	72	36.634	Monopterus_albus
ENSPMAG00000004189	-	97	37.313	ENSONIG00000007967	-	56	37.313	Oreochromis_niloticus
ENSPMAG00000004189	-	100	36.131	ENSORLG00000002268	-	95	35.345	Oryzias_latipes
ENSPMAG00000004189	-	100	36.765	ENSORLG00000021885	-	64	36.765	Oryzias_latipes
ENSPMAG00000004189	-	96	43.750	ENSORLG00020019227	-	55	35.185	Oryzias_latipes_hni
ENSPMAG00000004189	-	99	37.864	ENSORLG00020018921	-	68	37.864	Oryzias_latipes_hni
ENSPMAG00000004189	-	98	35.811	ENSORLG00015018099	-	73	33.908	Oryzias_latipes_hsok
ENSPMAG00000004189	-	99	35.345	ENSOMEG00000005578	-	68	35.345	Oryzias_melastigma
ENSPMAG00000004189	-	98	34.052	ENSPMGG00000006928	-	51	33.937	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	99	36.527	ENSPMGG00000019750	-	81	32.500	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	95	40.517	ENSPMGG00000002659	-	64	40.517	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	99	34.524	ENSPMGG00000009571	-	74	35.882	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	95	35.583	ENSPMGG00000002661	-	68	35.583	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	97	39.552	ENSPMGG00000007051	-	58	39.552	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	94	43.836	ENSPMGG00000002455	-	89	43.836	Periophthalmus_magnuspinnatus
ENSPMAG00000004189	-	99	35.673	ENSPFOG00000018860	-	99	35.673	Poecilia_formosa
ENSPMAG00000004189	-	98	40.588	ENSPFOG00000009491	-	55	40.588	Poecilia_formosa
ENSPMAG00000004189	-	98	35.870	ENSPLAG00000008941	-	86	35.870	Poecilia_latipinna
ENSPMAG00000004189	-	99	41.026	ENSPLAG00000010067	-	63	41.026	Poecilia_latipinna
ENSPMAG00000004189	-	97	35.870	ENSPLAG00000014832	-	83	35.870	Poecilia_latipinna
ENSPMAG00000004189	-	98	40.588	ENSPMEG00000024117	-	55	40.588	Poecilia_mexicana
ENSPMAG00000004189	-	98	39.423	ENSPMEG00000002953	-	55	39.423	Poecilia_mexicana
ENSPMAG00000004189	-	97	35.870	ENSPMEG00000005210	-	83	35.870	Poecilia_mexicana
ENSPMAG00000004189	-	97	37.864	ENSPREG00000002603	-	55	37.864	Poecilia_reticulata
ENSPMAG00000004189	-	98	36.667	ENSPREG00000009488	-	94	35.433	Poecilia_reticulata
ENSPMAG00000004189	-	95	42.593	ENSPNYG00000017888	-	65	36.747	Pundamilia_nyererei
ENSPMAG00000004189	-	99	36.527	ENSPNAG00000005946	-	84	38.182	Pygocentrus_nattereri
ENSPMAG00000004189	-	85	35.294	ENSSFOG00015011531	-	85	35.106	Scleropages_formosus
ENSPMAG00000004189	-	99	37.209	ENSSMAG00000013291	-	95	37.563	Scophthalmus_maximus
ENSPMAG00000004189	-	82	40.909	ENSSMAG00000004259	-	58	40.909	Scophthalmus_maximus
ENSPMAG00000004189	-	98	34.911	ENSSMAG00000008308	-	57	34.911	Scophthalmus_maximus
ENSPMAG00000004189	-	94	37.313	ENSSLDG00000011849	-	54	37.313	Seriola_lalandi_dorsalis
ENSPMAG00000004189	-	98	38.690	ENSSLDG00000014436	-	73	38.690	Seriola_lalandi_dorsalis
ENSPMAG00000004189	-	98	40.426	ENSSPAG00000011533	-	88	40.426	Stegastes_partitus
ENSPMAG00000004189	-	94	34.066	ENSSPAG00000011544	-	53	34.066	Stegastes_partitus
ENSPMAG00000004189	-	98	41.071	ENSXETG00000012506	znf91	99	38.953	Xenopus_tropicalis
ENSPMAG00000004189	-	93	42.222	ENSXCOG00000020768	-	63	42.222	Xiphophorus_couchianus
ENSPMAG00000004189	-	87	39.394	ENSXCOG00000000254	-	58	39.394	Xiphophorus_couchianus
ENSPMAG00000004189	-	98	40.244	ENSXCOG00000003441	-	53	35.393	Xiphophorus_couchianus
ENSPMAG00000004189	-	96	35.870	ENSXMAG00000012936	-	90	35.870	Xiphophorus_maculatus