EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004228 (Gene tree)
Gene ID: -
Gene Symbol: polr1d
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 5147 bases
Position: chrGL476408:174457-179603
Accession: ZDB-GENE-040930-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004631	RNA_pol_L_2	PF13656.6	4e-28	1	1
ENSPMAP00000004631	RNA_pol_L	PF01193.24	7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004650	-	359	-	ENSPMAP00000004631	118 (aa)	-	S4RHE9

Gene Model

Click here to download ENSPMAG00000004228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004228	polr1d	92	59.633	ENSG00000186184	POLR1D	94	59.633	Homo_sapiens
ENSPMAG00000004228	polr1d	81	59.375	ENSAPOG00000021882	polr1d	91	59.375	Acanthochromis_polyacanthus
ENSPMAG00000004228	polr1d	92	59.633	ENSAMEG00000019095	POLR1D	87	59.633	Ailuropoda_melanoleuca
ENSPMAG00000004228	polr1d	91	57.798	ENSACIG00000013328	polr1d	95	57.798	Amphilophus_citrinellus
ENSPMAG00000004228	polr1d	88	59.434	ENSAOCG00000018500	polr1d	93	59.434	Amphiprion_ocellaris
ENSPMAG00000004228	polr1d	88	60.377	ENSAPEG00000009489	polr1d	93	60.377	Amphiprion_percula
ENSPMAG00000004228	polr1d	90	60.185	ENSATEG00000019322	polr1d	95	60.185	Anabas_testudineus
ENSPMAG00000004228	polr1d	81	62.500	ENSACAG00000015753	POLR1D	83	62.500	Anolis_carolinensis
ENSPMAG00000004228	polr1d	92	59.633	ENSANAG00000024486	POLR1D	82	59.633	Aotus_nancymaae
ENSPMAG00000004228	polr1d	88	60.000	ENSACLG00000023805	polr1d	91	62.376	Astatotilapia_calliptera
ENSPMAG00000004228	polr1d	91	59.259	ENSAMXG00000036118	polr1d	94	59.259	Astyanax_mexicanus
ENSPMAG00000004228	polr1d	92	58.716	ENSBTAG00000033252	-	82	58.716	Bos_taurus
ENSPMAG00000004228	polr1d	92	58.716	ENSBTAG00000008642	POLR1D	82	58.716	Bos_taurus
ENSPMAG00000004228	polr1d	69	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSPMAG00000004228	polr1d	92	60.550	ENSCJAG00000044669	POLR1D	82	60.550	Callithrix_jacchus
ENSPMAG00000004228	polr1d	92	59.633	ENSCAFG00000006755	POLR1D	82	59.633	Canis_familiaris
ENSPMAG00000004228	polr1d	92	59.633	ENSCHIG00000021910	POLR1D	82	59.633	Capra_hircus
ENSPMAG00000004228	polr1d	92	50.450	ENSTSYG00000034852	-	92	50.450	Carlito_syrichta
ENSPMAG00000004228	polr1d	92	60.550	ENSTSYG00000026817	-	82	60.550	Carlito_syrichta
ENSPMAG00000004228	polr1d	56	55.224	ENSCAPG00000006058	-	68	55.224	Cavia_aperea
ENSPMAG00000004228	polr1d	56	55.224	ENSCPOG00000030450	-	68	55.224	Cavia_porcellus
ENSPMAG00000004228	polr1d	92	59.633	ENSCCAG00000021349	-	82	59.633	Cebus_capucinus
ENSPMAG00000004228	polr1d	90	48.624	ENSCCAG00000020191	-	92	48.624	Cebus_capucinus
ENSPMAG00000004228	polr1d	92	60.550	ENSCATG00000030710	-	82	60.550	Cercocebus_atys
ENSPMAG00000004228	polr1d	91	52.778	ENSCATG00000022900	-	80	52.778	Cercocebus_atys
ENSPMAG00000004228	polr1d	92	60.550	ENSCLAG00000017623	POLR1D	88	60.550	Chinchilla_lanigera
ENSPMAG00000004228	polr1d	79	63.830	ENSCPBG00000004719	POLR1D	93	63.830	Chrysemys_picta_bellii
ENSPMAG00000004228	polr1d	92	57.798	ENSCANG00000037694	-	82	57.798	Colobus_angolensis_palliatus
ENSPMAG00000004228	polr1d	92	59.633	ENSCANG00000028632	-	82	59.633	Colobus_angolensis_palliatus
ENSPMAG00000004228	polr1d	91	59.259	ENSCGRG00001021251	Polr1d	81	59.259	Cricetulus_griseus_chok1gshd
ENSPMAG00000004228	polr1d	91	59.259	ENSCGRG00000011639	Polr1d	81	59.259	Cricetulus_griseus_crigri
ENSPMAG00000004228	polr1d	87	59.813	ENSCSEG00000018268	polr1d	94	56.364	Cynoglossus_semilaevis
ENSPMAG00000004228	polr1d	91	57.407	ENSCVAG00000018527	polr1d	95	57.407	Cyprinodon_variegatus
ENSPMAG00000004228	polr1d	86	59.223	ENSDARG00000037570	polr1d	92	59.223	Danio_rerio
ENSPMAG00000004228	polr1d	92	57.798	ENSDNOG00000046247	-	81	57.798	Dasypus_novemcinctus
ENSPMAG00000004228	polr1d	92	58.716	ENSDNOG00000043676	-	82	58.716	Dasypus_novemcinctus
ENSPMAG00000004228	polr1d	92	57.798	ENSDORG00000029155	Polr1d	82	57.798	Dipodomys_ordii
ENSPMAG00000004228	polr1d	69	45.679	FBgn0086447	l(2)37Cg	77	45.679	Drosophila_melanogaster
ENSPMAG00000004228	polr1d	91	60.185	ENSETEG00000012797	POLR1D	87	60.185	Echinops_telfairi
ENSPMAG00000004228	polr1d	73	74.419	ENSEBUG00000011748	polr1d	61	74.419	Eptatretus_burgeri
ENSPMAG00000004228	polr1d	90	57.944	ENSEASG00005022487	POLR1D	83	57.944	Equus_asinus_asinus
ENSPMAG00000004228	polr1d	92	59.633	ENSEEUG00000013144	POLR1D	88	59.633	Erinaceus_europaeus
ENSPMAG00000004228	polr1d	92	61.261	ENSELUG00000005105	rpac2	97	61.261	Esox_lucius
ENSPMAG00000004228	polr1d	92	58.716	ENSFCAG00000030162	POLR1D	82	58.716	Felis_catus
ENSPMAG00000004228	polr1d	82	63.265	ENSFALG00000011463	POLR1D	97	63.265	Ficedula_albicollis
ENSPMAG00000004228	polr1d	92	59.633	ENSFDAG00000004463	POLR1D	82	59.633	Fukomys_damarensis
ENSPMAG00000004228	polr1d	85	62.376	ENSFHEG00000015410	polr1d	88	62.376	Fundulus_heteroclitus
ENSPMAG00000004228	polr1d	55	59.091	ENSGALG00000007470	POLR1D	65	59.091	Gallus_gallus
ENSPMAG00000004228	polr1d	91	56.481	ENSGAFG00000001693	polr1d	95	56.481	Gambusia_affinis
ENSPMAG00000004228	polr1d	86	61.538	ENSGACG00000018585	polr1d	88	61.538	Gasterosteus_aculeatus
ENSPMAG00000004228	polr1d	84	67.000	ENSGAGG00000008503	POLR1D	88	67.000	Gopherus_agassizii
ENSPMAG00000004228	polr1d	92	59.633	ENSGGOG00000004235	POLR1D	82	59.633	Gorilla_gorilla
ENSPMAG00000004228	polr1d	88	60.000	ENSHBUG00000002111	polr1d	92	60.000	Haplochromis_burtoni
ENSPMAG00000004228	polr1d	92	60.550	ENSHGLG00000003202	POLR1D	82	60.550	Heterocephalus_glaber_female
ENSPMAG00000004228	polr1d	92	60.550	ENSHGLG00100009393	POLR1D	82	60.550	Heterocephalus_glaber_male
ENSPMAG00000004228	polr1d	88	57.143	ENSHCOG00000003258	polr1d	92	57.143	Hippocampus_comes
ENSPMAG00000004228	polr1d	97	57.391	ENSIPUG00000014810	polr1d	100	57.391	Ictalurus_punctatus
ENSPMAG00000004228	polr1d	92	59.633	ENSSTOG00000013877	POLR1D	82	59.633	Ictidomys_tridecemlineatus
ENSPMAG00000004228	polr1d	91	46.729	ENSJJAG00000021667	-	63	46.729	Jaculus_jaculus
ENSPMAG00000004228	polr1d	91	57.407	ENSJJAG00000022671	-	90	57.407	Jaculus_jaculus
ENSPMAG00000004228	polr1d	85	59.406	ENSKMAG00000015256	polr1d	89	59.406	Kryptolebias_marmoratus
ENSPMAG00000004228	polr1d	91	57.407	ENSLBEG00000015919	polr1d	95	57.407	Labrus_bergylta
ENSPMAG00000004228	polr1d	90	64.486	ENSLACG00000006810	POLR1D	89	64.486	Latimeria_chalumnae
ENSPMAG00000004228	polr1d	62	67.123	ENSLOCG00000014976	polr1d	99	67.123	Lepisosteus_oculatus
ENSPMAG00000004228	polr1d	91	58.333	ENSLAFG00000032290	POLR1D	81	58.333	Loxodonta_africana
ENSPMAG00000004228	polr1d	92	59.633	ENSMFAG00000045264	POLR1D	84	59.633	Macaca_fascicularis
ENSPMAG00000004228	polr1d	91	50.926	ENSMMUG00000041570	-	92	50.926	Macaca_mulatta
ENSPMAG00000004228	polr1d	92	59.633	ENSMMUG00000020386	POLR1D	94	59.633	Macaca_mulatta
ENSPMAG00000004228	polr1d	74	57.955	ENSMNEG00000038120	-	70	60.714	Macaca_nemestrina
ENSPMAG00000004228	polr1d	92	59.633	ENSMNEG00000008630	-	82	59.633	Macaca_nemestrina
ENSPMAG00000004228	polr1d	91	52.778	ENSMLEG00000032251	-	80	52.778	Mandrillus_leucophaeus
ENSPMAG00000004228	polr1d	92	59.633	ENSMLEG00000041048	-	82	59.633	Mandrillus_leucophaeus
ENSPMAG00000004228	polr1d	87	59.615	ENSMAMG00000014834	polr1d	96	59.615	Mastacembelus_armatus
ENSPMAG00000004228	polr1d	81	62.500	ENSMZEG00005006638	polr1d	85	62.500	Maylandia_zebra
ENSPMAG00000004228	polr1d	77	66.304	ENSMGAG00000005322	POLR1D	84	66.304	Meleagris_gallopavo
ENSPMAG00000004228	polr1d	91	59.259	ENSMAUG00000001946	Polr1d	81	59.259	Mesocricetus_auratus
ENSPMAG00000004228	polr1d	92	58.716	ENSMICG00000016883	-	82	58.716	Microcebus_murinus
ENSPMAG00000004228	polr1d	92	46.789	ENSMICG00000007349	-	81	46.789	Microcebus_murinus
ENSPMAG00000004228	polr1d	91	58.333	ENSMOCG00000021288	Polr1d	81	58.333	Microtus_ochrogaster
ENSPMAG00000004228	polr1d	88	58.095	ENSMMOG00000009605	polr1d	92	58.095	Mola_mola
ENSPMAG00000004228	polr1d	86	61.765	ENSMODG00000023881	POLR1D	89	61.765	Monodelphis_domestica
ENSPMAG00000004228	polr1d	86	61.165	ENSMALG00000010652	polr1d	90	61.165	Monopterus_albus
ENSPMAG00000004228	polr1d	91	56.481	MGP_CAROLIEiJ_G0028034	Polr1d	81	56.481	Mus_caroli
ENSPMAG00000004228	polr1d	91	56.481	ENSMUSG00000029642	Polr1d	81	56.481	Mus_musculus
ENSPMAG00000004228	polr1d	94	56.250	MGP_PahariEiJ_G0024600	Polr1d	83	56.250	Mus_pahari
ENSPMAG00000004228	polr1d	91	57.407	MGP_SPRETEiJ_G0029032	Polr1d	81	57.407	Mus_spretus
ENSPMAG00000004228	polr1d	88	57.143	ENSMLUG00000004118	-	79	57.143	Myotis_lucifugus
ENSPMAG00000004228	polr1d	92	58.716	ENSMLUG00000027169	-	82	58.716	Myotis_lucifugus
ENSPMAG00000004228	polr1d	92	58.716	ENSNGAG00000006014	Polr1d	94	58.716	Nannospalax_galili
ENSPMAG00000004228	polr1d	88	60.000	ENSNBRG00000020327	polr1d	92	60.000	Neolamprologus_brichardi
ENSPMAG00000004228	polr1d	92	59.633	ENSNLEG00000000358	POLR1D	82	59.633	Nomascus_leucogenys
ENSPMAG00000004228	polr1d	75	59.551	ENSODEG00000014801	-	75	59.551	Octodon_degus
ENSPMAG00000004228	polr1d	92	61.468	ENSODEG00000005294	-	82	61.468	Octodon_degus
ENSPMAG00000004228	polr1d	86	65.385	ENSOANG00000008708	-	93	67.000	Ornithorhynchus_anatinus
ENSPMAG00000004228	polr1d	91	59.259	ENSOCUG00000015706	POLR1D	66	59.259	Oryctolagus_cuniculus
ENSPMAG00000004228	polr1d	91	59.259	ENSORLG00000010257	polr1d	94	59.259	Oryzias_latipes
ENSPMAG00000004228	polr1d	91	59.259	ENSORLG00020000533	polr1d	72	59.259	Oryzias_latipes_hni
ENSPMAG00000004228	polr1d	91	58.333	ENSORLG00015013267	polr1d	71	58.333	Oryzias_latipes_hsok
ENSPMAG00000004228	polr1d	85	58.416	ENSOMEG00000014912	polr1d	67	58.416	Oryzias_melastigma
ENSPMAG00000004228	polr1d	92	57.798	ENSOGAG00000014601	POLR1D	82	57.798	Otolemur_garnettii
ENSPMAG00000004228	polr1d	92	59.633	ENSOARG00000017005	POLR1D	84	59.633	Ovis_aries
ENSPMAG00000004228	polr1d	91	60.185	ENSPPAG00000028138	POLR1D	81	60.185	Pan_paniscus
ENSPMAG00000004228	polr1d	92	58.716	ENSPPRG00000003381	POLR1D	82	58.716	Panthera_pardus
ENSPMAG00000004228	polr1d	92	58.716	ENSPTIG00000018137	POLR1D	82	58.716	Panthera_tigris_altaica
ENSPMAG00000004228	polr1d	92	59.633	ENSPTRG00000005734	POLR1D	82	59.633	Pan_troglodytes
ENSPMAG00000004228	polr1d	71	58.824	ENSPANG00000035051	-	67	58.824	Papio_anubis
ENSPMAG00000004228	polr1d	92	59.633	ENSPANG00000020259	-	82	59.633	Papio_anubis
ENSPMAG00000004228	polr1d	80	63.158	ENSPKIG00000021891	polr1d	94	43.697	Paramormyrops_kingsleyae
ENSPMAG00000004228	polr1d	81	63.918	ENSPSIG00000011822	POLR1D	75	63.918	Pelodiscus_sinensis
ENSPMAG00000004228	polr1d	94	57.522	ENSPMGG00000010359	polr1d	98	57.522	Periophthalmus_magnuspinnatus
ENSPMAG00000004228	polr1d	94	50.000	ENSPMGG00000012998	POLR1D	83	50.000	Periophthalmus_magnuspinnatus
ENSPMAG00000004228	polr1d	91	59.259	ENSPEMG00000006336	-	83	59.259	Peromyscus_maniculatus_bairdii
ENSPMAG00000004228	polr1d	86	61.765	ENSPCIG00000001673	POLR1D	89	61.765	Phascolarctos_cinereus
ENSPMAG00000004228	polr1d	91	56.481	ENSPFOG00000023343	polr1d	100	58.621	Poecilia_formosa
ENSPMAG00000004228	polr1d	91	56.481	ENSPLAG00000009675	polr1d	95	56.481	Poecilia_latipinna
ENSPMAG00000004228	polr1d	91	56.481	ENSPMEG00000004628	polr1d	95	56.481	Poecilia_mexicana
ENSPMAG00000004228	polr1d	91	56.481	ENSPREG00000022032	polr1d	95	56.481	Poecilia_reticulata
ENSPMAG00000004228	polr1d	92	60.550	ENSPCOG00000028175	POLR1D	82	60.550	Propithecus_coquereli
ENSPMAG00000004228	polr1d	88	60.000	ENSPNYG00000000107	polr1d	92	60.000	Pundamilia_nyererei
ENSPMAG00000004228	polr1d	91	59.259	ENSPNAG00000001512	polr1d	91	59.259	Pygocentrus_nattereri
ENSPMAG00000004228	polr1d	92	59.633	ENSRBIG00000036378	-	82	59.633	Rhinopithecus_bieti
ENSPMAG00000004228	polr1d	92	56.881	ENSRBIG00000000336	-	82	56.881	Rhinopithecus_bieti
ENSPMAG00000004228	polr1d	92	57.798	ENSRROG00000026751	-	82	57.798	Rhinopithecus_roxellana
ENSPMAG00000004228	polr1d	92	59.633	ENSRROG00000042232	-	82	59.633	Rhinopithecus_roxellana
ENSPMAG00000004228	polr1d	82	44.898	YNL113W	RPC19	69	44.898	Saccharomyces_cerevisiae
ENSPMAG00000004228	polr1d	92	59.633	ENSSBOG00000028482	-	82	59.633	Saimiri_boliviensis_boliviensis
ENSPMAG00000004228	polr1d	75	60.674	ENSSBOG00000030146	-	65	60.674	Saimiri_boliviensis_boliviensis
ENSPMAG00000004228	polr1d	91	59.259	ENSSHAG00000001190	POLR1D	84	59.259	Sarcophilus_harrisii
ENSPMAG00000004228	polr1d	91	62.037	ENSSFOG00015011375	polr1d	95	62.037	Scleropages_formosus
ENSPMAG00000004228	polr1d	90	58.333	ENSSMAG00000011861	polr1d	95	58.333	Scophthalmus_maximus
ENSPMAG00000004228	polr1d	92	57.658	ENSSDUG00000011930	polr1d	97	57.658	Seriola_dumerili
ENSPMAG00000004228	polr1d	87	57.143	ENSSLDG00000023871	polr1d	89	57.143	Seriola_lalandi_dorsalis
ENSPMAG00000004228	polr1d	92	58.716	ENSSARG00000007840	POLR1D	82	58.716	Sorex_araneus
ENSPMAG00000004228	polr1d	82	66.327	ENSSPUG00000005786	POLR1D	87	64.706	Sphenodon_punctatus
ENSPMAG00000004228	polr1d	85	61.386	ENSSPAG00000011764	polr1d	89	61.386	Stegastes_partitus
ENSPMAG00000004228	polr1d	91	59.259	ENSSSCG00000009310	POLR1D	81	59.259	Sus_scrofa
ENSPMAG00000004228	polr1d	77	67.391	ENSTGUG00000005450	POLR1D	96	67.391	Taeniopygia_guttata
ENSPMAG00000004228	polr1d	81	60.825	ENSTRUG00000019741	polr1d	85	60.825	Takifugu_rubripes
ENSPMAG00000004228	polr1d	92	57.798	ENSTBEG00000007006	POLR1D	88	57.798	Tupaia_belangeri
ENSPMAG00000004228	polr1d	92	59.633	ENSUAMG00000011413	POLR1D	82	59.633	Ursus_americanus
ENSPMAG00000004228	polr1d	91	60.185	ENSUMAG00000016968	POLR1D	84	60.185	Ursus_maritimus
ENSPMAG00000004228	polr1d	92	59.633	ENSVVUG00000009216	POLR1D	82	59.633	Vulpes_vulpes
ENSPMAG00000004228	polr1d	81	60.204	ENSXCOG00000011731	polr1d	75	60.204	Xiphophorus_couchianus
ENSPMAG00000004228	polr1d	81	61.224	ENSXMAG00000017538	polr1d	75	61.224	Xiphophorus_maculatus