EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004329 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 21118 bases
Position: chrGL478267:5333-26450
Accession: ZDB-GENE-060810-40
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004766	zf-CCCH	PF00642.24	2.2e-06	1	1
ENSPMAP00000004766	TRM	PF02005.16	4.6e-137	1	1
ENSPMAP00000004766	Met_10	PF02475.16	5.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004785	-	1881	-	ENSPMAP00000004766	627 (aa)	-	S4RHT4

Gene Model

Click here to download ENSPMAG00000004329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004329	trmt1	90	60.381	ENSG00000104907	TRMT1	100	71.728	Homo_sapiens
ENSPMAG00000004329	trmt1	92	58.206	ENSAMEG00000012598	TRMT1	88	58.206	Ailuropoda_melanoleuca
ENSPMAG00000004329	trmt1	90	55.867	ENSACIG00000018680	trmt1	89	55.867	Amphilophus_citrinellus
ENSPMAG00000004329	trmt1	92	62.522	ENSAOCG00000006781	trmt1	87	62.522	Amphiprion_ocellaris
ENSPMAG00000004329	trmt1	92	62.522	ENSAPEG00000007712	trmt1	87	62.522	Amphiprion_percula
ENSPMAG00000004329	trmt1	90	64.148	ENSATEG00000001872	trmt1	85	64.148	Anabas_testudineus
ENSPMAG00000004329	trmt1	90	61.780	ENSACAG00000003825	TRMT1	93	61.780	Anolis_carolinensis
ENSPMAG00000004329	trmt1	89	58.711	ENSANAG00000023016	TRMT1	92	58.711	Aotus_nancymaae
ENSPMAG00000004329	trmt1	90	62.435	ENSACLG00000010073	trmt1	93	62.435	Astatotilapia_calliptera
ENSPMAG00000004329	trmt1	90	63.525	ENSAMXG00000012026	trmt1	86	63.525	Astyanax_mexicanus
ENSPMAG00000004329	trmt1	91	59.794	ENSBTAG00000019325	TRMT1	83	59.794	Bos_taurus
ENSPMAG00000004329	trmt1	80	39.139	WBGene00006613	trm-1	92	39.139	Caenorhabditis_elegans
ENSPMAG00000004329	trmt1	90	57.586	ENSCJAG00000004566	TRMT1	89	57.586	Callithrix_jacchus
ENSPMAG00000004329	trmt1	91	59.725	ENSCAFG00000017070	TRMT1	91	59.725	Canis_familiaris
ENSPMAG00000004329	trmt1	92	58.475	ENSCAFG00020005397	TRMT1	89	58.895	Canis_lupus_dingo
ENSPMAG00000004329	trmt1	91	59.520	ENSCHIG00000013569	TRMT1	88	59.520	Capra_hircus
ENSPMAG00000004329	trmt1	89	57.812	ENSTSYG00000003207	TRMT1	87	57.812	Carlito_syrichta
ENSPMAG00000004329	trmt1	86	56.624	ENSCAPG00000003355	TRMT1	97	56.624	Cavia_aperea
ENSPMAG00000004329	trmt1	92	59.396	ENSCPOG00000011754	TRMT1	90	59.396	Cavia_porcellus
ENSPMAG00000004329	trmt1	89	58.392	ENSCCAG00000022263	TRMT1	92	58.392	Cebus_capucinus
ENSPMAG00000004329	trmt1	70	51.802	ENSCATG00000038220	-	80	51.802	Cercocebus_atys
ENSPMAG00000004329	trmt1	96	56.709	ENSCATG00000039850	TRMT1	95	56.709	Cercocebus_atys
ENSPMAG00000004329	trmt1	96	57.903	ENSCLAG00000015295	TRMT1	92	57.903	Chinchilla_lanigera
ENSPMAG00000004329	trmt1	80	57.996	ENSCSAG00000006500	TRMT1	98	57.996	Chlorocebus_sabaeus
ENSPMAG00000004329	trmt1	89	64.695	ENSCPBG00000023866	TRMT1	84	64.695	Chrysemys_picta_bellii
ENSPMAG00000004329	trmt1	85	47.858	ENSCING00000002884	-	96	47.858	Ciona_intestinalis
ENSPMAG00000004329	trmt1	85	48.045	ENSCSAVG00000010927	-	100	46.629	Ciona_savignyi
ENSPMAG00000004329	trmt1	90	47.059	ENSCANG00000040631	TRMT1	87	47.059	Colobus_angolensis_palliatus
ENSPMAG00000004329	trmt1	86	46.486	ENSCANG00000031650	-	90	46.101	Colobus_angolensis_palliatus
ENSPMAG00000004329	trmt1	91	59.483	ENSCGRG00001022594	Trmt1	89	59.483	Cricetulus_griseus_chok1gshd
ENSPMAG00000004329	trmt1	91	59.483	ENSCGRG00000017732	Trmt1	87	59.483	Cricetulus_griseus_crigri
ENSPMAG00000004329	trmt1	90	62.742	ENSCSEG00000001643	trmt1	84	64.244	Cynoglossus_semilaevis
ENSPMAG00000004329	trmt1	90	64.476	ENSCVAG00000011886	trmt1	86	64.476	Cyprinodon_variegatus
ENSPMAG00000004329	trmt1	93	60.526	ENSDARG00000010978	trmt1	90	61.056	Danio_rerio
ENSPMAG00000004329	trmt1	81	40.571	ENSDNOG00000048240	-	89	40.571	Dasypus_novemcinctus
ENSPMAG00000004329	trmt1	89	59.545	ENSDORG00000014298	Trmt1	86	59.545	Dipodomys_ordii
ENSPMAG00000004329	trmt1	81	50.386	FBgn0032430	CG6388	88	50.386	Drosophila_melanogaster
ENSPMAG00000004329	trmt1	80	58.367	ENSEBUG00000003449	trmt1	74	58.498	Eptatretus_burgeri
ENSPMAG00000004329	trmt1	91	57.804	ENSEASG00005004050	TRMT1	92	57.804	Equus_asinus_asinus
ENSPMAG00000004329	trmt1	91	57.976	ENSECAG00000016149	TRMT1	92	57.976	Equus_caballus
ENSPMAG00000004329	trmt1	62	52.405	ENSEEUG00000014102	-	100	52.405	Erinaceus_europaeus
ENSPMAG00000004329	trmt1	89	62.787	ENSELUG00000021659	trmt1	85	62.787	Esox_lucius
ENSPMAG00000004329	trmt1	92	58.404	ENSFCAG00000000483	TRMT1	89	58.404	Felis_catus
ENSPMAG00000004329	trmt1	91	59.863	ENSFDAG00000007386	TRMT1	88	59.863	Fukomys_damarensis
ENSPMAG00000004329	trmt1	81	66.211	ENSFHEG00000012865	trmt1	85	66.211	Fundulus_heteroclitus
ENSPMAG00000004329	trmt1	89	58.528	ENSGMOG00000006564	trmt1	97	58.528	Gadus_morhua
ENSPMAG00000004329	trmt1	90	63.410	ENSGAFG00000011862	trmt1	89	63.410	Gambusia_affinis
ENSPMAG00000004329	trmt1	91	60.622	ENSGACG00000000227	trmt1	94	60.622	Gasterosteus_aculeatus
ENSPMAG00000004329	trmt1	89	64.516	ENSGAGG00000016432	TRMT1	84	64.516	Gopherus_agassizii
ENSPMAG00000004329	trmt1	96	56.938	ENSGGOG00000014007	TRMT1	95	56.938	Gorilla_gorilla
ENSPMAG00000004329	trmt1	86	56.273	ENSHBUG00000008821	trmt1	91	56.273	Haplochromis_burtoni
ENSPMAG00000004329	trmt1	91	59.622	ENSHGLG00000015972	TRMT1	89	59.622	Heterocephalus_glaber_female
ENSPMAG00000004329	trmt1	91	56.089	ENSHGLG00100018112	TRMT1	89	56.089	Heterocephalus_glaber_male
ENSPMAG00000004329	trmt1	90	61.391	ENSHCOG00000009447	trmt1	89	61.391	Hippocampus_comes
ENSPMAG00000004329	trmt1	90	61.658	ENSIPUG00000002899	trmt1	85	61.658	Ictalurus_punctatus
ENSPMAG00000004329	trmt1	90	58.813	ENSSTOG00000012531	TRMT1	88	58.813	Ictidomys_tridecemlineatus
ENSPMAG00000004329	trmt1	89	60.526	ENSJJAG00000017154	Trmt1	87	60.526	Jaculus_jaculus
ENSPMAG00000004329	trmt1	91	64.111	ENSKMAG00000011809	trmt1	97	63.240	Kryptolebias_marmoratus
ENSPMAG00000004329	trmt1	90	63.158	ENSLBEG00000012703	trmt1	85	63.158	Labrus_bergylta
ENSPMAG00000004329	trmt1	89	56.106	ENSLACG00000014585	TRMT1	94	55.986	Latimeria_chalumnae
ENSPMAG00000004329	trmt1	91	56.846	ENSLOCG00000006479	trmt1	99	57.439	Lepisosteus_oculatus
ENSPMAG00000004329	trmt1	90	60.241	ENSLAFG00000014072	TRMT1	89	60.241	Loxodonta_africana
ENSPMAG00000004329	trmt1	96	56.709	ENSMFAG00000033143	TRMT1	95	56.709	Macaca_fascicularis
ENSPMAG00000004329	trmt1	96	52.970	ENSMMUG00000001167	TRMT1	95	52.970	Macaca_mulatta
ENSPMAG00000004329	trmt1	96	56.709	ENSMNEG00000037867	TRMT1	95	56.709	Macaca_nemestrina
ENSPMAG00000004329	trmt1	96	56.844	ENSMLEG00000016142	TRMT1	94	56.844	Mandrillus_leucophaeus
ENSPMAG00000004329	trmt1	90	63.304	ENSMAMG00000004357	trmt1	86	63.304	Mastacembelus_armatus
ENSPMAG00000004329	trmt1	90	62.783	ENSMZEG00005014510	trmt1	86	62.783	Maylandia_zebra
ENSPMAG00000004329	trmt1	89	60.702	ENSMAUG00000011134	Trmt1	86	60.702	Mesocricetus_auratus
ENSPMAG00000004329	trmt1	89	60.664	ENSMICG00000000793	TRMT1	86	60.664	Microcebus_murinus
ENSPMAG00000004329	trmt1	91	59.758	ENSMOCG00000015895	Trmt1	88	59.114	Microtus_ochrogaster
ENSPMAG00000004329	trmt1	91	61.955	ENSMMOG00000011097	trmt1	93	61.955	Mola_mola
ENSPMAG00000004329	trmt1	90	61.552	ENSMODG00000011619	TRMT1	92	61.552	Monodelphis_domestica
ENSPMAG00000004329	trmt1	89	60.915	MGP_CAROLIEiJ_G0031304	Trmt1	87	60.915	Mus_caroli
ENSPMAG00000004329	trmt1	91	60.034	ENSMUSG00000001909	Trmt1	89	60.034	Mus_musculus
ENSPMAG00000004329	trmt1	91	59.863	MGP_SPRETEiJ_G0032422	Trmt1	89	59.863	Mus_spretus
ENSPMAG00000004329	trmt1	92	58.545	ENSMPUG00000004210	TRMT1	84	58.545	Mustela_putorius_furo
ENSPMAG00000004329	trmt1	89	60.664	ENSMLUG00000012809	TRMT1	85	60.664	Myotis_lucifugus
ENSPMAG00000004329	trmt1	92	58.773	ENSNGAG00000022486	Trmt1	89	58.773	Nannospalax_galili
ENSPMAG00000004329	trmt1	78	65.179	ENSNBRG00000024376	trmt1	86	65.179	Neolamprologus_brichardi
ENSPMAG00000004329	trmt1	78	55.152	ENSNLEG00000013019	-	94	55.152	Nomascus_leucogenys
ENSPMAG00000004329	trmt1	91	60.659	ENSMEUG00000013756	TRMT1	99	60.659	Notamacropus_eugenii
ENSPMAG00000004329	trmt1	73	65.366	ENSOPRG00000009471	-	71	65.366	Ochotona_princeps
ENSPMAG00000004329	trmt1	96	57.327	ENSODEG00000010323	TRMT1	94	57.327	Octodon_degus
ENSPMAG00000004329	trmt1	96	60.870	ENSONIG00000000400	trmt1	99	60.870	Oreochromis_niloticus
ENSPMAG00000004329	trmt1	74	62.156	ENSOCUG00000021934	TRMT1	89	62.368	Oryctolagus_cuniculus
ENSPMAG00000004329	trmt1	92	60.922	ENSORLG00000020074	trmt1	92	60.575	Oryzias_latipes
ENSPMAG00000004329	trmt1	91	63.167	ENSORLG00020007561	trmt1	91	63.058	Oryzias_latipes_hni
ENSPMAG00000004329	trmt1	91	63.194	ENSORLG00015006547	trmt1	88	63.194	Oryzias_latipes_hsok
ENSPMAG00000004329	trmt1	90	64.211	ENSOMEG00000019343	trmt1	87	64.211	Oryzias_melastigma
ENSPMAG00000004329	trmt1	91	59.520	ENSOGAG00000025576	TRMT1	91	59.520	Otolemur_garnettii
ENSPMAG00000004329	trmt1	91	48.205	ENSOARG00000009397	TRMT1	82	48.547	Ovis_aries
ENSPMAG00000004329	trmt1	92	53.480	ENSPPRG00000012117	TRMT1	90	52.961	Panthera_pardus
ENSPMAG00000004329	trmt1	69	59.122	ENSPTIG00000008833	TRMT1	85	59.122	Panthera_tigris_altaica
ENSPMAG00000004329	trmt1	88	45.660	ENSPTRG00000050421	-	91	45.660	Pan_troglodytes
ENSPMAG00000004329	trmt1	90	60.381	ENSPTRG00000010557	TRMT1	88	60.381	Pan_troglodytes
ENSPMAG00000004329	trmt1	97	56.667	ENSPANG00000009247	TRMT1	95	56.667	Papio_anubis
ENSPMAG00000004329	trmt1	70	51.577	ENSPANG00000034058	-	78	51.577	Papio_anubis
ENSPMAG00000004329	trmt1	91	62.630	ENSPKIG00000005309	trmt1	86	62.630	Paramormyrops_kingsleyae
ENSPMAG00000004329	trmt1	85	54.797	ENSPSIG00000008762	TRMT1	78	54.797	Pelodiscus_sinensis
ENSPMAG00000004329	trmt1	90	61.888	ENSPMGG00000019764	trmt1	91	62.522	Periophthalmus_magnuspinnatus
ENSPMAG00000004329	trmt1	91	60.000	ENSPEMG00000016247	Trmt1	87	60.000	Peromyscus_maniculatus_bairdii
ENSPMAG00000004329	trmt1	96	57.987	ENSPCIG00000019273	TRMT1	97	57.987	Phascolarctos_cinereus
ENSPMAG00000004329	trmt1	90	64.121	ENSPFOG00000008527	trmt1	88	64.121	Poecilia_formosa
ENSPMAG00000004329	trmt1	90	64.311	ENSPLAG00000018788	trmt1	88	66.408	Poecilia_latipinna
ENSPMAG00000004329	trmt1	90	63.943	ENSPMEG00000013120	trmt1	88	63.943	Poecilia_mexicana
ENSPMAG00000004329	trmt1	90	63.055	ENSPREG00000000211	trmt1	85	63.055	Poecilia_reticulata
ENSPMAG00000004329	trmt1	96	57.327	ENSPPYG00000009622	TRMT1	94	57.327	Pongo_abelii
ENSPMAG00000004329	trmt1	89	55.846	ENSPCAG00000003698	TRMT1	88	55.846	Procavia_capensis
ENSPMAG00000004329	trmt1	89	60.140	ENSPCOG00000008653	TRMT1	87	60.140	Propithecus_coquereli
ENSPMAG00000004329	trmt1	96	56.522	ENSPVAG00000015076	TRMT1	94	56.522	Pteropus_vampyrus
ENSPMAG00000004329	trmt1	90	59.826	ENSPNYG00000013960	trmt1	93	59.826	Pundamilia_nyererei
ENSPMAG00000004329	trmt1	84	63.502	ENSPNAG00000024859	trmt1	88	63.502	Pygocentrus_nattereri
ENSPMAG00000004329	trmt1	89	60.563	ENSRNOG00000002914	Trmt1	89	60.563	Rattus_norvegicus
ENSPMAG00000004329	trmt1	86	46.112	ENSRBIG00000037505	-	87	46.112	Rhinopithecus_bieti
ENSPMAG00000004329	trmt1	90	60.345	ENSRBIG00000038324	TRMT1	87	60.345	Rhinopithecus_bieti
ENSPMAG00000004329	trmt1	86	45.389	ENSRROG00000031847	-	86	45.389	Rhinopithecus_roxellana
ENSPMAG00000004329	trmt1	90	60.345	ENSRROG00000028599	TRMT1	87	60.345	Rhinopithecus_roxellana
ENSPMAG00000004329	trmt1	80	35.564	YDR120C	-	91	35.564	Saccharomyces_cerevisiae
ENSPMAG00000004329	trmt1	89	58.711	ENSSBOG00000028861	TRMT1	92	58.711	Saimiri_boliviensis_boliviensis
ENSPMAG00000004329	trmt1	90	60.348	ENSSHAG00000014381	TRMT1	96	59.727	Sarcophilus_harrisii
ENSPMAG00000004329	trmt1	91	61.579	ENSSFOG00015004139	trmt1	90	59.076	Scleropages_formosus
ENSPMAG00000004329	trmt1	90	63.066	ENSSMAG00000021136	trmt1	86	63.066	Scophthalmus_maximus
ENSPMAG00000004329	trmt1	92	62.735	ENSSDUG00000012740	trmt1	86	62.735	Seriola_dumerili
ENSPMAG00000004329	trmt1	92	62.735	ENSSLDG00000005971	trmt1	86	62.735	Seriola_lalandi_dorsalis
ENSPMAG00000004329	trmt1	81	59.152	ENSSARG00000005138	TRMT1	91	59.152	Sorex_araneus
ENSPMAG00000004329	trmt1	90	48.252	ENSSPUG00000001084	TRMT1	91	48.776	Sphenodon_punctatus
ENSPMAG00000004329	trmt1	92	62.887	ENSSPAG00000007153	trmt1	95	62.887	Stegastes_partitus
ENSPMAG00000004329	trmt1	91	59.552	ENSSSCG00000013744	TRMT1	91	59.552	Sus_scrofa
ENSPMAG00000004329	trmt1	87	60.644	ENSTRUG00000010700	trmt1	85	60.644	Takifugu_rubripes
ENSPMAG00000004329	trmt1	89	64.248	ENSTNIG00000018808	trmt1	98	64.248	Tetraodon_nigroviridis
ENSPMAG00000004329	trmt1	89	58.392	ENSTTRG00000006379	TRMT1	87	58.392	Tursiops_truncatus
ENSPMAG00000004329	trmt1	92	58.545	ENSUAMG00000022911	TRMT1	95	56.143	Ursus_americanus
ENSPMAG00000004329	trmt1	92	58.037	ENSUMAG00000006027	TRMT1	93	58.037	Ursus_maritimus
ENSPMAG00000004329	trmt1	91	59.897	ENSVVUG00000024177	TRMT1	88	59.897	Vulpes_vulpes
ENSPMAG00000004329	trmt1	79	62.675	ENSXETG00000033863	TRMT1	99	62.675	Xenopus_tropicalis
ENSPMAG00000004329	trmt1	90	63.410	ENSXCOG00000015733	trmt1	88	63.410	Xiphophorus_couchianus
ENSPMAG00000004329	trmt1	90	63.233	ENSXMAG00000013823	trmt1	98	63.233	Xiphophorus_maculatus