EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004344 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 11645 bases
Position: chrGL479046:11287-22931
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004773	zf-C2H2	PF00096.26	4.1e-20	1	5
ENSPMAP00000004773	zf-C2H2	PF00096.26	4.1e-20	2	5
ENSPMAP00000004773	zf-C2H2	PF00096.26	4.1e-20	3	5
ENSPMAP00000004773	zf-C2H2	PF00096.26	4.1e-20	4	5
ENSPMAP00000004773	zf-C2H2	PF00096.26	4.1e-20	5	5
ENSPMAP00000004773	zf-met	PF12874.7	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004792	-	723	-	ENSPMAP00000004773	241 (aa)	-	S4RHU1

Gene Model

Click here to download ENSPMAG00000004344's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004344's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004344	-	95	48.148	ENSPMAG00000004710	znf236	53	48.148
ENSPMAG00000004344	-	93	47.778	ENSPMAG00000003606	-	77	47.778
ENSPMAG00000004344	-	97	39.378	ENSPMAG00000007983	-	98	39.378
ENSPMAG00000004344	-	93	35.268	ENSPMAG00000005248	prdm5	82	35.268
ENSPMAG00000004344	-	93	33.476	ENSPMAG00000009794	PRDM15	58	34.375
ENSPMAG00000004344	-	96	49.206	ENSPMAG00000007500	ZNF436	99	49.206
ENSPMAG00000004344	-	99	35.079	ENSPMAG00000007731	-	91	35.079
ENSPMAG00000004344	-	93	38.938	ENSPMAG00000004189	-	98	33.918
ENSPMAG00000004344	-	85	46.377	ENSPMAG00000006708	-	95	46.377
ENSPMAG00000004344	-	93	39.286	ENSPMAG00000000706	-	99	39.286
ENSPMAG00000004344	-	95	41.758	ENSPMAG00000007492	-	86	41.758
ENSPMAG00000004344	-	82	41.111	ENSPMAG00000008196	-	100	41.111
ENSPMAG00000004344	-	95	31.878	ENSPMAG00000006198	ZBTB47	73	32.759
ENSPMAG00000004344	-	83	44.828	ENSPMAG00000008879	-	100	44.828
ENSPMAG00000004344	-	85	50.000	ENSPMAG00000007084	-	99	50.000
ENSPMAG00000004344	-	92	34.118	ENSPMAG00000006066	znf366	95	34.118
ENSPMAG00000004344	-	93	40.609	ENSPMAG00000001294	-	100	40.609
ENSPMAG00000004344	-	99	51.613	ENSPMAG00000000404	-	99	51.613
ENSPMAG00000004344	-	93	41.546	ENSPMAG00000000401	-	91	41.546
ENSPMAG00000004344	-	89	47.674	ENSPMAG00000000839	-	94	47.674
ENSPMAG00000004344	-	88	40.496	ENSPMAG00000008691	-	98	40.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004344	-	96	62.069	ENSSHAG00000016096	-	99	38.710	Sarcophilus_harrisii