EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMAG00000004449 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Minus strand
Length
2053 bases
Position
chrGL479484:4-2056
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMAP00000004874RRM_1PF00076.222.2e-3512
ENSPMAP00000004874RRM_1PF00076.222.2e-3522
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMAT00000004893-702-ENSPMAP00000004874234 (aa)-S4RI42
Gene Model
Click here to download ENSPMAG00000004449's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004449's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMAG00000004449-8231.915ENSPMAG00000009237TARDBP8332.474
ENSPMAG00000004449-7772.778ENSPMAG00000008125HNRNPA05072.778
ENSPMAG00000004449-6837.500ENSPMAG00000006977-8337.500
ENSPMAG00000004449-7571.591ENSPMAG00000008735HNRNPA09268.718
ENSPMAG00000004449-7930.811ENSPMAG00000008859-5230.811
ENSPMAG00000004449-7767.956ENSPMAG00000008270HNRNPA2B17965.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMAG00000004449-7655.618ENSG00000177733HNRNPA07650.216Homo_sapiens
ENSPMAG00000004449-7974.194ENSAPOG00000003641hnrnpa37574.725Acanthochromis_polyacanthus
ENSPMAG00000004449-8755.660ENSAPOG00000003387HNRNPA07156.098Acanthochromis_polyacanthus
ENSPMAG00000004449-7454.070ENSAPOG00000003364HNRNPA05853.933Acanthochromis_polyacanthus
ENSPMAG00000004449-7775.138ENSAPOG00000014678-5374.725Acanthochromis_polyacanthus
ENSPMAG00000004449-8370.769ENSAPOG00000003688hnrnpa37574.725Acanthochromis_polyacanthus
ENSPMAG00000004449-7577.698ENSAMEG00000004293-5877.305Ailuropoda_melanoleuca
ENSPMAG00000004449-7754.696ENSAMEG00000016316HNRNPA06254.404Ailuropoda_melanoleuca
ENSPMAG00000004449-7759.116ENSACIG00000021834HNRNPA08557.812Amphilophus_citrinellus
ENSPMAG00000004449-8370.769ENSAOCG00000004095hnrnpa36759.592Amphiprion_ocellaris
ENSPMAG00000004449-8370.769ENSAPEG00000022522hnrnpa36759.592Amphiprion_percula
ENSPMAG00000004449-8370.769ENSATEG00000015304hnrnpa37359.592Anabas_testudineus
ENSPMAG00000004449-7554.023ENSATEG00000003526-9254.023Anabas_testudineus
ENSPMAG00000004449-7754.696ENSANAG00000017086HNRNPA06354.404Aotus_nancymaae
ENSPMAG00000004449-7973.913ENSANAG00000037918-7060.241Aotus_nancymaae
ENSPMAG00000004449-8371.282ENSACLG00000008532hnrnpa36965.801Astatotilapia_calliptera
ENSPMAG00000004449-7750.829ENSACLG00000008973HNRNPA06049.738Astatotilapia_calliptera
ENSPMAG00000004449-7876.503ENSAMXG00000007065hnrnpa36366.814Astyanax_mexicanus
ENSPMAG00000004449-7655.307ENSBTAG00000016929HNRNPA06154.404Bos_taurus
ENSPMAG00000004449-8568.687ENSCJAG00000013830-6960.236Callithrix_jacchus
ENSPMAG00000004449-7655.307ENSCJAG00000006112HNRNPA06454.404Callithrix_jacchus
ENSPMAG00000004449-9051.185ENSCAFG00000001132HNRNPA07649.153Canis_familiaris
ENSPMAG00000004449-9051.185ENSCAFG00020008142HNRNPA07649.153Canis_lupus_dingo
ENSPMAG00000004449-7655.307ENSCHIG00000002602HNRNPA06354.404Capra_hircus
ENSPMAG00000004449-7868.132ENSCAPG00000003643-5364.039Cavia_aperea
ENSPMAG00000004449-7655.307ENSCPOG00000026092HNRNPA06454.404Cavia_porcellus
ENSPMAG00000004449-7754.696ENSCCAG00000010302HNRNPA06354.404Cebus_capucinus
ENSPMAG00000004449-7965.217ENSCATG00000038569-6559.483Cercocebus_atys
ENSPMAG00000004449-7755.000ENSCATG00000021167HNRNPA07550.216Cercocebus_atys
ENSPMAG00000004449-8046.277ENSCLAG00000007120-5048.485Chinchilla_lanigera
ENSPMAG00000004449-7655.307ENSCLAG00000015132HNRNPA06454.891Chinchilla_lanigera
ENSPMAG00000004449-7655.618ENSCSAG00000000499HNRNPA07650.216Chlorocebus_sabaeus
ENSPMAG00000004449-7656.425ENSCPBG00000008738HNRNPA07549.784Chrysemys_picta_bellii
ENSPMAG00000004449-7755.000ENSCANG00000038062HNRNPA07550.216Colobus_angolensis_palliatus
ENSPMAG00000004449-7973.913ENSCANG00000017881-6462.097Colobus_angolensis_palliatus
ENSPMAG00000004449-8560.606ENSCGRG00001010070-6660.591Cricetulus_griseus_chok1gshd
ENSPMAG00000004449-7655.307ENSCGRG00001005548Hnrnpa07250.459Cricetulus_griseus_chok1gshd
ENSPMAG00000004449-8560.606ENSCGRG00000007592-6460.591Cricetulus_griseus_crigri
ENSPMAG00000004449-7869.945ENSCGRG00000003686-7067.513Cricetulus_griseus_crigri
ENSPMAG00000004449-8371.282ENSCVAG00000018995hnrnpa36566.816Cyprinodon_variegatus
ENSPMAG00000004449-7776.796ENSDARG00000059351hnrnpa38372.500Danio_rerio
ENSPMAG00000004449-7973.370ENSDNOG00000031964-7069.802Dasypus_novemcinctus
ENSPMAG00000004449-7754.696ENSDNOG00000030903HNRNPA06254.404Dasypus_novemcinctus
ENSPMAG00000004449-8059.574ENSDORG00000023528-5158.291Dipodomys_ordii
ENSPMAG00000004449-7962.500ENSETEG00000007747-7159.804Echinops_telfairi
ENSPMAG00000004449-8568.342ENSEBUG00000016570HNRNPA08672.432Eptatretus_burgeri
ENSPMAG00000004449-7568.750ENSEBUG00000009297HNRNPA05665.969Eptatretus_burgeri
ENSPMAG00000004449-7655.307ENSECAG00000032164HNRNPA06454.404Equus_caballus
ENSPMAG00000004449-8370.769ENSELUG00000023080hnrnpa37371.500Esox_lucius
ENSPMAG00000004449-7655.307ENSFCAG00000040261HNRNPA06354.404Felis_catus
ENSPMAG00000004449-8747.391ENSFALG00000014395HNRNPA06847.391Ficedula_albicollis
ENSPMAG00000004449-7959.239ENSFDAG00000018739-7356.650Fukomys_damarensis
ENSPMAG00000004449-7655.307ENSFDAG00000019780HNRNPA08253.061Fukomys_damarensis
ENSPMAG00000004449-7962.500ENSFDAG00000014067-5859.901Fukomys_damarensis
ENSPMAG00000004449-8548.990ENSFDAG00000009547-5846.977Fukomys_damarensis
ENSPMAG00000004449-7551.705ENSFHEG00000008390HNRNPA05750.256Fundulus_heteroclitus
ENSPMAG00000004449-7560.377ENSFHEG00000008384HNRNPA08060.377Fundulus_heteroclitus
ENSPMAG00000004449-7659.887ENSGMOG00000016232HNRNPA06857.292Gadus_morhua
ENSPMAG00000004449-7954.301ENSGALG00000006160HNRNPA07648.927Gallus_gallus
ENSPMAG00000004449-8569.154ENSGACG00000004477hnrnpa37373.889Gasterosteus_aculeatus
ENSPMAG00000004449-7656.425ENSGAGG00000005632HNRNPA06055.978Gopherus_agassizii
ENSPMAG00000004449-8371.282ENSHBUG00000019734hnrnpa36965.801Haplochromis_burtoni
ENSPMAG00000004449-7759.116ENSHBUG00000023868HNRNPA07458.115Haplochromis_burtoni
ENSPMAG00000004449-7966.848ENSHGLG00000014577-7563.861Heterocephalus_glaber_female
ENSPMAG00000004449-7655.307ENSHGLG00000018216HNRNPA06554.404Heterocephalus_glaber_female
ENSPMAG00000004449-8570.202ENSHGLG00100006677-5773.656Heterocephalus_glaber_male
ENSPMAG00000004449-8567.172ENSHGLG00100001336-5270.430Heterocephalus_glaber_male
ENSPMAG00000004449-7657.865ENSHCOG00000007174HNRNPA09657.865Hippocampus_comes
ENSPMAG00000004449-7776.667ENSIPUG00000019815RO325476.667Ictalurus_punctatus
ENSPMAG00000004449-8146.444ENSSTOG00000019374-6546.964Ictidomys_tridecemlineatus
ENSPMAG00000004449-7954.891ENSJJAG00000006954Hnrnpa06354.301Jaculus_jaculus
ENSPMAG00000004449-8371.795ENSKMAG00000015973hnrnpa35973.000Kryptolebias_marmoratus
ENSPMAG00000004449-8571.212ENSLBEG00000016767hnrnpa36866.228Labrus_bergylta
ENSPMAG00000004449-9250.667ENSLACG00000014480HNRNPA07451.327Latimeria_chalumnae
ENSPMAG00000004449-8175.661ENSLACG00000008189hnrnpa35872.596Latimeria_chalumnae
ENSPMAG00000004449-7877.596ENSLOCG00000006986hnrnpa36467.857Lepisosteus_oculatus
ENSPMAG00000004449-7876.503ENSLOCG00000006476-6364.224Lepisosteus_oculatus
ENSPMAG00000004449-7776.250ENSLAFG00000027712-7166.502Loxodonta_africana
ENSPMAG00000004449-7755.000ENSMFAG00000030522HNRNPA07550.216Macaca_fascicularis
ENSPMAG00000004449-7964.516ENSMMUG00000031232-6559.322Macaca_mulatta
ENSPMAG00000004449-7755.000ENSMNEG00000015863HNRNPA07550.216Macaca_nemestrina
ENSPMAG00000004449-9159.346ENSMNEG00000038943-7961.111Macaca_nemestrina
ENSPMAG00000004449-7963.587ENSMLEG00000033415-6458.547Mandrillus_leucophaeus
ENSPMAG00000004449-7755.000ENSMLEG00000026629HNRNPA07550.216Mandrillus_leucophaeus
ENSPMAG00000004449-8158.730ENSMAMG00000017754HNRNPA06961.017Mastacembelus_armatus
ENSPMAG00000004449-8371.282ENSMZEG00005004663hnrnpa36965.801Maylandia_zebra
ENSPMAG00000004449-7750.829ENSMZEG00005001055HNRNPA06049.738Maylandia_zebra
ENSPMAG00000004449-7655.307ENSMAUG00000018485Hnrnpa06154.891Mesocricetus_auratus
ENSPMAG00000004449-7658.989ENSMODG00000002463-9558.989Monodelphis_domestica
ENSPMAG00000004449-8564.646ENSMODG00000024570-6160.274Monodelphis_domestica
ENSPMAG00000004449-7655.618ENSMODG00000014720HNRNPA07054.891Monodelphis_domestica
ENSPMAG00000004449-9168.075ENSMALG00000009691hnrnpa38273.846Monopterus_albus
ENSPMAG00000004449-7655.307MGP_CAROLIEiJ_G0018593Hnrnpa07250.000Mus_caroli
ENSPMAG00000004449-9050.935ENSMUSG00000007836Hnrnpa07349.776Mus_musculus
ENSPMAG00000004449-7655.307MGP_PahariEiJ_G0019657Hnrnpa07350.673Mus_pahari
ENSPMAG00000004449-7655.307MGP_SPRETEiJ_G0019473Hnrnpa07949.167Mus_spretus
ENSPMAG00000004449-9450.228ENSMPUG00000019790HNRNPA07649.573Mustela_putorius_furo
ENSPMAG00000004449-7755.249ENSMLUG00000028644-5955.102Myotis_lucifugus
ENSPMAG00000004449-7754.696ENSMLUG00000012683-6354.922Myotis_lucifugus
ENSPMAG00000004449-7655.307ENSNGAG00000008883Hnrnpa06753.571Nannospalax_galili
ENSPMAG00000004449-7758.470ENSNGAG00000001008-5456.219Nannospalax_galili
ENSPMAG00000004449-7971.739ENSNLEG00000027151-5867.805Nomascus_leucogenys
ENSPMAG00000004449-7755.000ENSNLEG00000008518HNRNPA07450.216Nomascus_leucogenys
ENSPMAG00000004449-7655.307ENSMEUG00000013675HNRNPA07448.673Notamacropus_eugenii
ENSPMAG00000004449-7655.307ENSODEG00000019566HNRNPA06653.500Octodon_degus
ENSPMAG00000004449-7975.543ENSODEG00000016578-6471.429Octodon_degus
ENSPMAG00000004449-8371.282ENSONIG00000008607hnrnpa35764.935Oreochromis_niloticus
ENSPMAG00000004449-7750.000ENSORLG00000027074-7950.000Oryzias_latipes
ENSPMAG00000004449-8249.198ENSORLG00000025015-5850.847Oryzias_latipes
ENSPMAG00000004449-8249.198ENSORLG00000025332-5850.847Oryzias_latipes
ENSPMAG00000004449-8371.282ENSORLG00000017561hnrnpa36665.929Oryzias_latipes
ENSPMAG00000004449-8370.769ENSORLG00020020788hnrnpa36665.487Oryzias_latipes_hni
ENSPMAG00000004449-7749.724ENSORLG00020007109-5750.282Oryzias_latipes_hni
ENSPMAG00000004449-8447.849ENSORLG00020022487-6150.289Oryzias_latipes_hni
ENSPMAG00000004449-7749.718ENSORLG00020007505-5850.289Oryzias_latipes_hni
ENSPMAG00000004449-7749.432ENSORLG00020008203-5850.000Oryzias_latipes_hni
ENSPMAG00000004449-7454.651ENSORLG00015016302HNRNPA05853.889Oryzias_latipes_hsok
ENSPMAG00000004449-7651.977ENSORLG00015017144-5951.977Oryzias_latipes_hsok
ENSPMAG00000004449-7749.718ENSORLG00015016169HNRNPA05950.289Oryzias_latipes_hsok
ENSPMAG00000004449-7750.282ENSORLG00015016157-6150.282Oryzias_latipes_hsok
ENSPMAG00000004449-7751.111ENSORLG00015015182-7851.111Oryzias_latipes_hsok
ENSPMAG00000004449-8351.136ENSORLG00015015185-6251.136Oryzias_latipes_hsok
ENSPMAG00000004449-9737.712ENSORLG00015016236HNRNPA07340.206Oryzias_latipes_hsok
ENSPMAG00000004449-7751.111ENSORLG00015016507-5551.705Oryzias_latipes_hsok
ENSPMAG00000004449-8371.282ENSORLG00015014774hnrnpa36665.929Oryzias_latipes_hsok
ENSPMAG00000004449-8370.769ENSOMEG00000004838hnrnpa36071.782Oryzias_melastigma
ENSPMAG00000004449-7754.696ENSOGAG00000025754HNRNPA08154.167Otolemur_garnettii
ENSPMAG00000004449-7754.696ENSOARG00000015434HNRNPA06554.404Ovis_aries
ENSPMAG00000004449-7755.000ENSPPAG00000005303HNRNPA07450.216Pan_paniscus
ENSPMAG00000004449-7655.307ENSPPRG00000014655HNRNPA06354.404Panthera_pardus
ENSPMAG00000004449-7755.000ENSPTRG00000017273HNRNPA07450.216Pan_troglodytes
ENSPMAG00000004449-7755.000ENSPANG00000012900HNRNPA07550.216Papio_anubis
ENSPMAG00000004449-8571.212ENSPKIG00000022916hnrnpa37371.921Paramormyrops_kingsleyae
ENSPMAG00000004449-7561.364ENSPKIG00000020270HNRNPA07357.073Paramormyrops_kingsleyae
ENSPMAG00000004449-7562.500ENSPKIG00000020281-6058.049Paramormyrops_kingsleyae
ENSPMAG00000004449-7674.860ENSPMGG00000000747hnrnpa37374.359Periophthalmus_magnuspinnatus
ENSPMAG00000004449-7655.307ENSPEMG00000020274Hnrnpa08948.444Peromyscus_maniculatus_bairdii
ENSPMAG00000004449-8370.769ENSPFOG00000014049hnrnpa36766.368Poecilia_formosa
ENSPMAG00000004449-7454.386ENSPLAG00000015223-6550.754Poecilia_latipinna
ENSPMAG00000004449-8370.769ENSPMEG00000006390hnrnpa36766.368Poecilia_mexicana
ENSPMAG00000004449-7757.459ENSPMEG00000017025HNRNPA09857.459Poecilia_mexicana
ENSPMAG00000004449-7675.978ENSPREG00000005411hnrnpa37266.972Poecilia_reticulata
ENSPMAG00000004449-7560.377ENSPREG00000010619HNRNPA08660.377Poecilia_reticulata
ENSPMAG00000004449-7973.913ENSPPYG00000001012-6470.297Pongo_abelii
ENSPMAG00000004449-7777.160ENSPPYG00000012967-8370.968Pongo_abelii
ENSPMAG00000004449-7655.618ENSPPYG00000015814HNRNPA07650.216Pongo_abelii
ENSPMAG00000004449-7676.836ENSPNYG00000008424hnrnpa38271.569Pundamilia_nyererei
ENSPMAG00000004449-7659.887ENSPNAG00000023333HNRNPA06558.421Pygocentrus_nattereri
ENSPMAG00000004449-7655.307ENSRNOG00000039876LOC6814107948.333Rattus_norvegicus
ENSPMAG00000004449-7755.000ENSRBIG00000023673HNRNPA07550.216Rhinopithecus_bieti
ENSPMAG00000004449-9955.603ENSRROG00000034643-5462.366Rhinopithecus_roxellana
ENSPMAG00000004449-7755.000ENSRROG00000002558HNRNPA07550.216Rhinopithecus_roxellana
ENSPMAG00000004449-8571.717ENSSFOG00015001814hnrnpa35175.410Scleropages_formosus
ENSPMAG00000004449-7875.956ENSSFOG00015016280hnrnpa16169.378Scleropages_formosus
ENSPMAG00000004449-7561.932ENSSFOG00015002650HNRNPA05959.585Scleropages_formosus
ENSPMAG00000004449-8370.256ENSSMAG00000015218hnrnpa36063.755Scophthalmus_maximus
ENSPMAG00000004449-8370.256ENSSDUG00000000381hnrnpa36472.139Seriola_dumerili
ENSPMAG00000004449-7655.866ENSSPUG00000016613HNRNPA06354.922Sphenodon_punctatus
ENSPMAG00000004449-8370.769ENSSPAG00000008969hnrnpa36765.778Stegastes_partitus
ENSPMAG00000004449-7865.934ENSSSCG00000040926-5165.934Sus_scrofa
ENSPMAG00000004449-9848.696ENSSSCG00000001098-6350.424Sus_scrofa
ENSPMAG00000004449-8363.131ENSSSCG00000033635-5165.934Sus_scrofa
ENSPMAG00000004449-8645.982ENSTGUG00000001186HNRNPA07245.982Taeniopygia_guttata
ENSPMAG00000004449-7551.724ENSTRUG00000021494-6550.521Takifugu_rubripes
ENSPMAG00000004449-8275.130ENSTRUG00000017504hnrnpa35775.130Takifugu_rubripes
ENSPMAG00000004449-8275.130ENSTNIG00000016958hnrnpa37973.500Tetraodon_nigroviridis
ENSPMAG00000004449-7655.307ENSTTRG00000000499HNRNPA06454.404Tursiops_truncatus
ENSPMAG00000004449-9450.685ENSVVUG00000014736HNRNPA07649.362Vulpes_vulpes
ENSPMAG00000004449-7758.333ENSXETG00000003833hnrnpa06356.566Xenopus_tropicalis
ENSPMAG00000004449-8674.257ENSXETG00000001806hnrnpa36365.833Xenopus_tropicalis
ENSPMAG00000004449-7956.757ENSXMAG00000019804HNRNPA09856.757Xiphophorus_maculatus
ENSPMAG00000004449-8570.202ENSXMAG00000000439hnrnpa36865.929Xiphophorus_maculatus
ENSPMAG00000004449-7752.486ENSXMAG00000029150HNRNPA06052.406Xiphophorus_maculatus

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