EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004508 (Gene tree)
Gene ID: -
Gene Symbol: eif5b
Alias: -
Full Name: eukaryotic translation initiation factor 5B
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 42222 bases
Position: chrGL477257:103516-145737
Accession: ZDB-GENE-050208-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005027	IF-2	PF11987.8	3.4e-07	1	1
ENSPMAP00000005027	GTP_EFTU	PF00009.27	3.2e-32	1	1
ENSPMAP00000005027	MMR_HSR1	PF01926.23	6.9e-07	1	1
ENSPMAP00000005027	GTP_EFTU_D2	PF03144.25	2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005046	-	3666	-	ENSPMAP00000005027	1201 (aa)	-	S4RIJ5

Gene Model

Click here to download ENSPMAG00000004508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004508's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004508	eif5b	52	74.759	ENSAPOG00000004375	eif5b	74	65.487	Acanthochromis_polyacanthus
ENSPMAG00000004508	eif5b	69	64.877	ENSACIG00000024324	eif5b	81	65.105	Amphilophus_citrinellus
ENSPMAG00000004508	eif5b	52	75.563	ENSAOCG00000018386	eif5b	74	65.449	Amphiprion_ocellaris
ENSPMAG00000004508	eif5b	50	76.119	ENSATEG00000011451	-	77	64.233	Anabas_testudineus
ENSPMAG00000004508	eif5b	73	66.145	ENSATEG00000006765	eif5b	75	64.323	Anabas_testudineus
ENSPMAG00000004508	eif5b	90	58.274	ENSACAG00000008305	-	80	62.308	Anolis_carolinensis
ENSPMAG00000004508	eif5b	73	65.257	ENSACLG00000005530	eif5b	88	65.795	Astatotilapia_calliptera
ENSPMAG00000004508	eif5b	52	76.688	ENSAMXG00000018383	eif5b	75	65.827	Astyanax_mexicanus
ENSPMAG00000004508	eif5b	71	46.330	WBGene00021857	iffb-1	74	47.694	Caenorhabditis_elegans
ENSPMAG00000004508	eif5b	71	61.387	ENSCJAG00000009960	-	72	62.357	Callithrix_jacchus
ENSPMAG00000004508	eif5b	73	62.472	ENSCAPG00000014619	-	74	62.249	Cavia_aperea
ENSPMAG00000004508	eif5b	89	59.459	ENSCPOG00000011967	-	73	65.517	Cavia_porcellus
ENSPMAG00000004508	eif5b	55	54.018	ENSCHOG00000002137	-	57	66.359	Choloepus_hoffmanni
ENSPMAG00000004508	eif5b	51	61.564	ENSCSAVG00000008808	-	81	53.079	Ciona_savignyi
ENSPMAG00000004508	eif5b	52	74.277	ENSCSEG00000014153	eif5b	74	63.616	Cynoglossus_semilaevis
ENSPMAG00000004508	eif5b	52	75.723	ENSCVAG00000019619	eif5b	75	65.867	Cyprinodon_variegatus
ENSPMAG00000004508	eif5b	73	66.963	ENSDARG00000016548	eif5b	70	66.740	Danio_rerio
ENSPMAG00000004508	eif5b	51	67.157	FBgn0026259	eIF5B	75	58.456	Drosophila_melanogaster
ENSPMAG00000004508	eif5b	64	64.080	ENSEBUG00000013800	eif5b	63	65.590	Eptatretus_burgeri
ENSPMAG00000004508	eif5b	73	63.345	ENSGMOG00000002031	eif5b	73	63.265	Gadus_morhua
ENSPMAG00000004508	eif5b	52	74.235	ENSGACG00000010536	eif5b	85	74.235	Gasterosteus_aculeatus
ENSPMAG00000004508	eif5b	52	74.759	ENSGAGG00000022242	-	92	74.759	Gopherus_agassizii
ENSPMAG00000004508	eif5b	52	75.723	ENSHBUG00000023319	eif5b	74	64.784	Haplochromis_burtoni
ENSPMAG00000004508	eif5b	52	75.080	ENSHCOG00000002807	eif5b	75	65.632	Hippocampus_comes
ENSPMAG00000004508	eif5b	73	65.807	ENSIPUG00000020910	eif5b	77	65.295	Ictalurus_punctatus
ENSPMAG00000004508	eif5b	52	76.367	ENSKMAG00000004325	eif5b	74	66.593	Kryptolebias_marmoratus
ENSPMAG00000004508	eif5b	73	61.333	ENSLBEG00000027090	eif5b	82	61.581	Labrus_bergylta
ENSPMAG00000004508	eif5b	52	74.482	ENSLACG00000011688	eif5b	79	62.680	Latimeria_chalumnae
ENSPMAG00000004508	eif5b	52	75.563	ENSMAMG00000022568	eif5b	74	65.160	Mastacembelus_armatus
ENSPMAG00000004508	eif5b	52	75.723	ENSMZEG00005012696	eif5b	74	64.286	Maylandia_zebra
ENSPMAG00000004508	eif5b	67	64.614	ENSMODG00000001387	-	68	64.627	Monodelphis_domestica
ENSPMAG00000004508	eif5b	52	75.080	ENSMALG00000005862	eif5b	74	65.705	Monopterus_albus
ENSPMAG00000004508	eif5b	61	69.580	ENSMEUG00000007080	-	63	69.580	Notamacropus_eugenii
ENSPMAG00000004508	eif5b	52	75.402	ENSONIG00000018749	eif5b	73	65.548	Oreochromis_niloticus
ENSPMAG00000004508	eif5b	99	56.132	ENSOANG00000004621	-	74	66.293	Ornithorhynchus_anatinus
ENSPMAG00000004508	eif5b	73	65.494	ENSOCUG00000021154	-	74	65.286	Oryctolagus_cuniculus
ENSPMAG00000004508	eif5b	73	65.498	ENSORLG00000001525	eif5b	78	64.157	Oryzias_latipes
ENSPMAG00000004508	eif5b	73	65.533	ENSORLG00020005327	eif5b	74	65.769	Oryzias_latipes_hni
ENSPMAG00000004508	eif5b	73	65.271	ENSORLG00015008949	eif5b	78	63.762	Oryzias_latipes_hsok
ENSPMAG00000004508	eif5b	65	65.093	ENSOMEG00000016539	eif5b	100	65.380	Oryzias_melastigma
ENSPMAG00000004508	eif5b	52	74.920	ENSPKIG00000011133	eif5b	74	65.088	Paramormyrops_kingsleyae
ENSPMAG00000004508	eif5b	57	66.201	ENSPSIG00000014914	-	95	66.201	Pelodiscus_sinensis
ENSPMAG00000004508	eif5b	52	75.080	ENSPFOG00000007543	eif5b	99	68.071	Poecilia_formosa
ENSPMAG00000004508	eif5b	52	75.080	ENSPLAG00000015913	eif5b	78	63.750	Poecilia_latipinna
ENSPMAG00000004508	eif5b	52	75.080	ENSPMEG00000006712	eif5b	75	65.525	Poecilia_mexicana
ENSPMAG00000004508	eif5b	65	61.616	ENSPCAG00000007829	-	70	60.859	Procavia_capensis
ENSPMAG00000004508	eif5b	73	62.542	ENSPCOG00000019508	-	100	71.383	Propithecus_coquereli
ENSPMAG00000004508	eif5b	78	63.067	ENSPVAG00000006592	-	67	63.067	Pteropus_vampyrus
ENSPMAG00000004508	eif5b	73	65.135	ENSPNYG00000021051	eif5b	89	64.477	Pundamilia_nyererei
ENSPMAG00000004508	eif5b	73	66.107	ENSPNAG00000023852	eif5b	78	63.627	Pygocentrus_nattereri
ENSPMAG00000004508	eif5b	52	75.402	ENSSFOG00015000594	eif5b	51	75.402	Scleropages_formosus
ENSPMAG00000004508	eif5b	74	63.768	ENSSMAG00000000045	eif5b	81	65.448	Scophthalmus_maximus
ENSPMAG00000004508	eif5b	69	66.271	ENSSDUG00000005847	eif5b	82	66.271	Seriola_dumerili
ENSPMAG00000004508	eif5b	69	66.033	ENSSLDG00000013738	eif5b	83	66.033	Seriola_lalandi_dorsalis
ENSPMAG00000004508	eif5b	74	62.749	ENSTNIG00000006580	eif5b	96	64.018	Tetraodon_nigroviridis
ENSPMAG00000004508	eif5b	52	79.913	ENSTBEG00000009133	-	56	79.913	Tupaia_belangeri
ENSPMAG00000004508	eif5b	52	74.720	ENSXCOG00000016681	eif5b	95	63.504	Xiphophorus_couchianus
ENSPMAG00000004508	eif5b	52	74.960	ENSXMAG00000001002	eif5b	95	63.647	Xiphophorus_maculatus