EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004544 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: -
Full Name: zgc:123010
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 21818 bases
Position: chrGL476392:606479-628296
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000004980	RRM_1	PF00076.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000004999	-	837	-	ENSPMAP00000004980	279 (aa)	-	S4RIE8

Gene Model

Click here to download ENSPMAG00000004544's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004544's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004544	zgc:123010	80	38.938	ENSPMAG00000009352	-	82	37.603

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004544	zgc:123010	100	46.233	ENSAPOG00000019633	zgc:123010	56	46.233	Acanthochromis_polyacanthus
ENSPMAG00000004544	zgc:123010	85	40.496	ENSAPOG00000001034	-	58	40.496	Acanthochromis_polyacanthus
ENSPMAG00000004544	zgc:123010	99	31.361	ENSAPOG00000005058	si:dkey-33c12.4	50	31.361	Acanthochromis_polyacanthus
ENSPMAG00000004544	zgc:123010	100	46.595	ENSACIG00000021684	zgc:123010	72	46.595	Amphilophus_citrinellus
ENSPMAG00000004544	zgc:123010	100	45.890	ENSAOCG00000005910	zgc:123010	56	45.890	Amphiprion_ocellaris
ENSPMAG00000004544	zgc:123010	100	45.890	ENSAPEG00000014305	zgc:123010	60	45.890	Amphiprion_percula
ENSPMAG00000004544	zgc:123010	100	41.156	ENSATEG00000022160	-	59	41.156	Anabas_testudineus
ENSPMAG00000004544	zgc:123010	100	46.599	ENSATEG00000001220	zgc:123010	56	46.599	Anabas_testudineus
ENSPMAG00000004544	zgc:123010	71	38.693	ENSAPLG00000013566	-	96	38.693	Anas_platyrhynchos
ENSPMAG00000004544	zgc:123010	99	42.230	ENSACLG00000012346	-	58	42.321	Astatotilapia_calliptera
ENSPMAG00000004544	zgc:123010	100	44.558	ENSACLG00000010188	zgc:123010	57	44.558	Astatotilapia_calliptera
ENSPMAG00000004544	zgc:123010	100	48.410	ENSAMXG00000041967	zgc:123010	54	48.410	Astyanax_mexicanus
ENSPMAG00000004544	zgc:123010	98	30.060	ENSCVAG00000006564	-	51	30.060	Cyprinodon_variegatus
ENSPMAG00000004544	zgc:123010	100	46.918	ENSCVAG00000013288	zgc:123010	57	46.918	Cyprinodon_variegatus
ENSPMAG00000004544	zgc:123010	100	47.670	ENSDARG00000039082	zgc:123010	59	47.670	Danio_rerio
ENSPMAG00000004544	zgc:123010	99	33.542	ENSDARG00000057890	si:dkey-33c12.4	50	33.542	Danio_rerio
ENSPMAG00000004544	zgc:123010	100	43.056	ENSELUG00000021447	-	58	43.056	Esox_lucius
ENSPMAG00000004544	zgc:123010	99	35.410	ENSELUG00000002009	si:dkey-33c12.4	87	35.410	Esox_lucius
ENSPMAG00000004544	zgc:123010	100	46.552	ENSELUG00000022008	zgc:123010	69	44.561	Esox_lucius
ENSPMAG00000004544	zgc:123010	80	31.923	ENSFALG00000008867	-	99	31.923	Ficedula_albicollis
ENSPMAG00000004544	zgc:123010	100	47.241	ENSFHEG00000002306	zgc:123010	56	47.241	Fundulus_heteroclitus
ENSPMAG00000004544	zgc:123010	99	30.882	ENSFHEG00000005521	si:dkey-33c12.4	52	30.882	Fundulus_heteroclitus
ENSPMAG00000004544	zgc:123010	90	30.279	ENSGMOG00000001292	-	98	30.279	Gadus_morhua
ENSPMAG00000004544	zgc:123010	100	46.284	ENSGMOG00000018473	zgc:123010	78	46.622	Gadus_morhua
ENSPMAG00000004544	zgc:123010	100	45.638	ENSGAFG00000009373	zgc:123010	57	45.638	Gambusia_affinis
ENSPMAG00000004544	zgc:123010	98	35.439	ENSGACG00000004936	-	85	35.439	Gasterosteus_aculeatus
ENSPMAG00000004544	zgc:123010	100	44.178	ENSGACG00000007620	zgc:123010	78	44.178	Gasterosteus_aculeatus
ENSPMAG00000004544	zgc:123010	99	43.003	ENSHBUG00000016720	-	58	43.345	Haplochromis_burtoni
ENSPMAG00000004544	zgc:123010	99	33.227	ENSIPUG00000005998	si:dkey-33c12.4	50	33.227	Ictalurus_punctatus
ENSPMAG00000004544	zgc:123010	100	45.890	ENSKMAG00000021350	zgc:123010	57	45.890	Kryptolebias_marmoratus
ENSPMAG00000004544	zgc:123010	99	31.953	ENSKMAG00000016610	si:dkey-33c12.4	52	31.065	Kryptolebias_marmoratus
ENSPMAG00000004544	zgc:123010	99	42.807	ENSLBEG00000013518	-	56	42.807	Labrus_bergylta
ENSPMAG00000004544	zgc:123010	100	47.423	ENSLBEG00000023984	zgc:123010	57	47.423	Labrus_bergylta
ENSPMAG00000004544	zgc:123010	99	45.487	ENSLACG00000009001	zgc:123010	63	45.487	Latimeria_chalumnae
ENSPMAG00000004544	zgc:123010	99	36.308	ENSLACG00000004602	-	58	36.923	Latimeria_chalumnae
ENSPMAG00000004544	zgc:123010	88	42.727	ENSLOCG00000001861	-	50	33.133	Lepisosteus_oculatus
ENSPMAG00000004544	zgc:123010	100	42.177	ENSLOCG00000008967	zgc:123010	58	42.857	Lepisosteus_oculatus
ENSPMAG00000004544	zgc:123010	99	43.525	ENSMAMG00000003394	-	77	43.525	Mastacembelus_armatus
ENSPMAG00000004544	zgc:123010	99	42.606	ENSMAMG00000002377	-	67	42.606	Mastacembelus_armatus
ENSPMAG00000004544	zgc:123010	99	42.606	ENSMAMG00000002460	-	71	42.606	Mastacembelus_armatus
ENSPMAG00000004544	zgc:123010	100	46.341	ENSMAMG00000001145	zgc:123010	70	46.341	Mastacembelus_armatus
ENSPMAG00000004544	zgc:123010	99	43.525	ENSMAMG00000003439	-	78	43.525	Mastacembelus_armatus
ENSPMAG00000004544	zgc:123010	100	44.558	ENSMZEG00005027733	zgc:123010	57	44.558	Maylandia_zebra
ENSPMAG00000004544	zgc:123010	99	42.230	ENSMZEG00005014740	-	73	42.321	Maylandia_zebra
ENSPMAG00000004544	zgc:123010	100	45.105	ENSMMOG00000010544	zgc:123010	63	45.105	Mola_mola
ENSPMAG00000004544	zgc:123010	97	36.237	ENSMMOG00000017955	-	71	36.111	Mola_mola
ENSPMAG00000004544	zgc:123010	99	30.233	ENSMALG00000002265	si:dkey-33c12.4	53	30.233	Monopterus_albus
ENSPMAG00000004544	zgc:123010	100	46.918	ENSMALG00000017698	zgc:123010	56	46.918	Monopterus_albus
ENSPMAG00000004544	zgc:123010	100	45.455	ENSNBRG00000021157	zgc:123010	65	45.455	Neolamprologus_brichardi
ENSPMAG00000004544	zgc:123010	99	36.918	ENSONIG00000012263	-	87	36.918	Oreochromis_niloticus
ENSPMAG00000004544	zgc:123010	100	43.197	ENSONIG00000000297	-	98	43.197	Oreochromis_niloticus
ENSPMAG00000004544	zgc:123010	77	34.703	ENSONIG00000007538	-	84	34.703	Oreochromis_niloticus
ENSPMAG00000004544	zgc:123010	100	43.537	ENSONIG00000018353	zgc:123010	60	43.537	Oreochromis_niloticus
ENSPMAG00000004544	zgc:123010	86	43.636	ENSORLG00000029651	si:dkey-33c12.4	52	30.240	Oryzias_latipes
ENSPMAG00000004544	zgc:123010	100	45.205	ENSORLG00015008373	zgc:123010	57	45.205	Oryzias_latipes_hsok
ENSPMAG00000004544	zgc:123010	100	45.890	ENSOMEG00000003408	zgc:123010	57	45.890	Oryzias_melastigma
ENSPMAG00000004544	zgc:123010	99	43.403	ENSPKIG00000015521	zgc:123010	63	43.403	Paramormyrops_kingsleyae
ENSPMAG00000004544	zgc:123010	100	43.110	ENSPMGG00000020251	zgc:123010	63	43.110	Periophthalmus_magnuspinnatus
ENSPMAG00000004544	zgc:123010	100	45.302	ENSPFOG00000001073	zgc:123010	57	45.302	Poecilia_formosa
ENSPMAG00000004544	zgc:123010	100	45.302	ENSPLAG00000007711	zgc:123010	57	45.302	Poecilia_latipinna
ENSPMAG00000004544	zgc:123010	100	45.302	ENSPMEG00000005092	zgc:123010	57	45.302	Poecilia_mexicana
ENSPMAG00000004544	zgc:123010	100	46.786	ENSPREG00000019587	zgc:123010	65	46.786	Poecilia_reticulata
ENSPMAG00000004544	zgc:123010	100	45.051	ENSPNYG00000007893	zgc:123010	57	45.051	Pundamilia_nyererei
ENSPMAG00000004544	zgc:123010	100	39.542	ENSPNYG00000023304	-	73	39.542	Pundamilia_nyererei
ENSPMAG00000004544	zgc:123010	100	48.057	ENSPNAG00000007579	zgc:123010	56	48.057	Pygocentrus_nattereri
ENSPMAG00000004544	zgc:123010	98	31.046	ENSSFOG00015005186	-	51	31.699	Scleropages_formosus
ENSPMAG00000004544	zgc:123010	99	42.759	ENSSFOG00015021394	zgc:123010	60	42.414	Scleropages_formosus
ENSPMAG00000004544	zgc:123010	98	33.022	ENSSFOG00015009199	-	52	33.022	Scleropages_formosus
ENSPMAG00000004544	zgc:123010	99	40.418	ENSSMAG00000021096	-	56	40.278	Scophthalmus_maximus
ENSPMAG00000004544	zgc:123010	100	44.718	ENSSMAG00000002904	zgc:123010	60	43.299	Scophthalmus_maximus
ENSPMAG00000004544	zgc:123010	98	33.533	ENSSDUG00000003213	si:dkey-33c12.4	54	33.533	Seriola_dumerili
ENSPMAG00000004544	zgc:123010	100	46.233	ENSSDUG00000008651	zgc:123010	56	46.233	Seriola_dumerili
ENSPMAG00000004544	zgc:123010	99	40.614	ENSSDUG00000014026	-	58	40.614	Seriola_dumerili
ENSPMAG00000004544	zgc:123010	100	46.233	ENSSLDG00000019386	zgc:123010	58	46.233	Seriola_lalandi_dorsalis
ENSPMAG00000004544	zgc:123010	98	34.226	ENSSLDG00000009448	si:dkey-33c12.4	50	34.226	Seriola_lalandi_dorsalis
ENSPMAG00000004544	zgc:123010	100	47.440	ENSSPAG00000013621	zgc:123010	56	47.440	Stegastes_partitus
ENSPMAG00000004544	zgc:123010	99	30.000	ENSSPAG00000022577	-	50	30.294	Stegastes_partitus
ENSPMAG00000004544	zgc:123010	100	47.260	ENSTRUG00000024824	zgc:123010	58	47.260	Takifugu_rubripes
ENSPMAG00000004544	zgc:123010	99	36.620	ENSTNIG00000010542	-	86	36.620	Tetraodon_nigroviridis
ENSPMAG00000004544	zgc:123010	100	43.299	ENSTNIG00000001303	zgc:123010	88	43.299	Tetraodon_nigroviridis
ENSPMAG00000004544	zgc:123010	77	34.404	ENSTNIG00000001154	-	91	34.404	Tetraodon_nigroviridis
ENSPMAG00000004544	zgc:123010	100	46.953	ENSXETG00000033896	-	97	46.953	Xenopus_tropicalis
ENSPMAG00000004544	zgc:123010	100	45.545	ENSXCOG00000012281	zgc:123010	70	45.545	Xiphophorus_couchianus
ENSPMAG00000004544	zgc:123010	100	45.638	ENSXMAG00000002598	zgc:123010	57	45.638	Xiphophorus_maculatus