EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004551 (Gene tree)
Gene ID: -
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 6235 bases
Position: chrGL476545:177182-183416
Accession: ZDB-GENE-050522-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005095	KH_1	PF00013.29	1.3e-52	1	3
ENSPMAP00000005095	KH_1	PF00013.29	1.3e-52	2	3
ENSPMAP00000005095	KH_1	PF00013.29	1.3e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005114	-	1073	-	ENSPMAP00000005095	349 (aa)	-	S4RIR3

Gene Model

Click here to download ENSPMAG00000004551's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004551	pcbp3	86	32.090	ENSPMAG00000005383	igf2bp3	61	32.090
ENSPMAG00000004551	pcbp3	82	71.795	ENSPMAG00000004637	-	100	71.795
ENSPMAG00000004551	pcbp3	81	33.945	ENSPMAG00000003229	-	76	33.945
ENSPMAG00000004551	pcbp3	90	34.524	ENSPMAG00000008286	-	75	34.328
ENSPMAG00000004551	pcbp3	56	34.375	ENSPMAG00000001644	-	58	34.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004551	pcbp3	88	72.492	ENSAPOG00000020003	pcbp3	85	72.492	Acanthochromis_polyacanthus
ENSPMAG00000004551	pcbp3	90	74.522	ENSAPOG00000016582	-	94	74.522	Acanthochromis_polyacanthus
ENSPMAG00000004551	pcbp3	91	70.871	ENSAMEG00000001697	-	98	67.335	Ailuropoda_melanoleuca
ENSPMAG00000004551	pcbp3	90	66.172	ENSACIG00000010933	pcbp3	97	64.263	Amphilophus_citrinellus
ENSPMAG00000004551	pcbp3	91	70.154	ENSACIG00000002739	-	98	70.154	Amphilophus_citrinellus
ENSPMAG00000004551	pcbp3	88	74.757	ENSAOCG00000008592	-	96	74.757	Amphiprion_ocellaris
ENSPMAG00000004551	pcbp3	81	71.233	ENSAOCG00000007806	-	99	71.233	Amphiprion_ocellaris
ENSPMAG00000004551	pcbp3	93	70.988	ENSAPEG00000005209	-	99	70.988	Amphiprion_percula
ENSPMAG00000004551	pcbp3	90	68.843	ENSAPEG00000008011	pcbp3	95	68.843	Amphiprion_percula
ENSPMAG00000004551	pcbp3	91	71.384	ENSATEG00000009833	-	97	71.384	Anabas_testudineus
ENSPMAG00000004551	pcbp3	88	67.470	ENSATEG00000015787	-	98	67.470	Anabas_testudineus
ENSPMAG00000004551	pcbp3	90	64.011	ENSAPLG00000008951	-	80	64.011	Anas_platyrhynchos
ENSPMAG00000004551	pcbp3	91	71.646	ENSAPLG00000002975	-	98	71.646	Anas_platyrhynchos
ENSPMAG00000004551	pcbp3	90	68.639	ENSACAG00000009819	-	97	68.639	Anolis_carolinensis
ENSPMAG00000004551	pcbp3	91	66.106	ENSACAG00000004607	-	98	66.106	Anolis_carolinensis
ENSPMAG00000004551	pcbp3	92	60.311	ENSANAG00000030702	-	99	74.274	Aotus_nancymaae
ENSPMAG00000004551	pcbp3	91	74.214	ENSACLG00000003801	-	98	74.214	Astatotilapia_calliptera
ENSPMAG00000004551	pcbp3	90	68.546	ENSACLG00000011835	pcbp3	95	68.546	Astatotilapia_calliptera
ENSPMAG00000004551	pcbp3	91	68.513	ENSAMXG00000003440	pcbp3	97	68.513	Astyanax_mexicanus
ENSPMAG00000004551	pcbp3	89	59.701	ENSAMXG00000001760	zgc:110045	73	59.701	Astyanax_mexicanus
ENSPMAG00000004551	pcbp3	88	73.377	ENSAMXG00000013588	-	98	73.377	Astyanax_mexicanus
ENSPMAG00000004551	pcbp3	70	72.951	ENSCAFG00020019472	-	86	72.951	Canis_lupus_dingo
ENSPMAG00000004551	pcbp3	91	74.132	ENSCSAG00000007440	-	89	74.132	Chlorocebus_sabaeus
ENSPMAG00000004551	pcbp3	89	69.461	ENSCPBG00000000733	-	73	69.461	Chrysemys_picta_bellii
ENSPMAG00000004551	pcbp3	93	73.089	ENSCPBG00000012151	-	98	70.359	Chrysemys_picta_bellii
ENSPMAG00000004551	pcbp3	88	71.521	ENSCSEG00000000822	pcbp3	97	71.521	Cynoglossus_semilaevis
ENSPMAG00000004551	pcbp3	88	60.778	ENSCSEG00000016984	-	95	60.778	Cynoglossus_semilaevis
ENSPMAG00000004551	pcbp3	90	69.048	ENSCVAG00000014482	pcbp3	95	69.048	Cyprinodon_variegatus
ENSPMAG00000004551	pcbp3	91	73.585	ENSCVAG00000005262	-	98	73.585	Cyprinodon_variegatus
ENSPMAG00000004551	pcbp3	91	68.915	ENSDARG00000054378	pcbp3	98	68.915	Danio_rerio
ENSPMAG00000004551	pcbp3	91	64.353	ENSETEG00000015988	-	98	64.353	Echinops_telfairi
ENSPMAG00000004551	pcbp3	68	78.571	ENSEBUG00000005495	pcbp3	70	78.571	Eptatretus_burgeri
ENSPMAG00000004551	pcbp3	78	82.288	ENSEBUG00000016192	pcbp3	99	82.288	Eptatretus_burgeri
ENSPMAG00000004551	pcbp3	97	72.492	ENSEBUG00000007485	-	92	71.364	Eptatretus_burgeri
ENSPMAG00000004551	pcbp3	91	73.438	ENSELUG00000001560	-	98	63.944	Esox_lucius
ENSPMAG00000004551	pcbp3	89	69.552	ENSELUG00000003521	pcbp3	94	69.903	Esox_lucius
ENSPMAG00000004551	pcbp3	90	64.011	ENSFALG00000004411	-	76	64.011	Ficedula_albicollis
ENSPMAG00000004551	pcbp3	91	74.684	ENSFALG00000003949	-	98	74.684	Ficedula_albicollis
ENSPMAG00000004551	pcbp3	88	72.727	ENSFHEG00000016615	pcbp3	93	72.727	Fundulus_heteroclitus
ENSPMAG00000004551	pcbp3	91	71.384	ENSFHEG00000006539	-	97	71.384	Fundulus_heteroclitus
ENSPMAG00000004551	pcbp3	88	55.488	ENSGMOG00000008611	-	99	55.488	Gadus_morhua
ENSPMAG00000004551	pcbp3	89	61.934	ENSGMOG00000011992	pcbp3	95	62.538	Gadus_morhua
ENSPMAG00000004551	pcbp3	91	64.045	ENSGALG00000004394	-	98	73.118	Gallus_gallus
ENSPMAG00000004551	pcbp3	88	69.697	ENSGALG00000013155	-	97	67.477	Gallus_gallus
ENSPMAG00000004551	pcbp3	90	74.204	ENSGAFG00000010274	-	94	74.204	Gambusia_affinis
ENSPMAG00000004551	pcbp3	88	64.985	ENSGAFG00000011430	pcbp3	94	64.985	Gambusia_affinis
ENSPMAG00000004551	pcbp3	88	62.069	ENSGACG00000014955	-	95	62.069	Gasterosteus_aculeatus
ENSPMAG00000004551	pcbp3	91	69.940	ENSGACG00000002266	-	94	71.605	Gasterosteus_aculeatus
ENSPMAG00000004551	pcbp3	62	63.014	ENSGAGG00000006956	-	85	63.014	Gopherus_agassizii
ENSPMAG00000004551	pcbp3	85	74.539	ENSGAGG00000000271	-	100	74.539	Gopherus_agassizii
ENSPMAG00000004551	pcbp3	91	74.214	ENSHBUG00000021782	-	98	74.214	Haplochromis_burtoni
ENSPMAG00000004551	pcbp3	88	72.078	ENSHBUG00000010697	pcbp3	96	72.078	Haplochromis_burtoni
ENSPMAG00000004551	pcbp3	90	70.701	ENSHCOG00000006067	-	96	70.701	Hippocampus_comes
ENSPMAG00000004551	pcbp3	90	69.048	ENSHCOG00000017868	pcbp3	95	69.048	Hippocampus_comes
ENSPMAG00000004551	pcbp3	93	70.679	ENSIPUG00000006238	pcbp3	99	70.679	Ictalurus_punctatus
ENSPMAG00000004551	pcbp3	90	73.567	ENSKMAG00000018530	-	94	73.567	Kryptolebias_marmoratus
ENSPMAG00000004551	pcbp3	90	68.843	ENSKMAG00000003046	pcbp3	95	68.843	Kryptolebias_marmoratus
ENSPMAG00000004551	pcbp3	91	60.062	ENSLBEG00000006542	-	97	59.215	Labrus_bergylta
ENSPMAG00000004551	pcbp3	88	71.845	ENSLBEG00000006201	pcbp3	93	71.845	Labrus_bergylta
ENSPMAG00000004551	pcbp3	89	64.986	ENSLACG00000010804	zgc:110045	74	64.986	Latimeria_chalumnae
ENSPMAG00000004551	pcbp3	90	64.641	ENSLACG00000010386	pcbp3	75	64.641	Latimeria_chalumnae
ENSPMAG00000004551	pcbp3	89	68.047	ENSLOCG00000005058	zgc:110045	81	68.047	Lepisosteus_oculatus
ENSPMAG00000004551	pcbp3	91	69.760	ENSLOCG00000009369	pcbp3	98	69.760	Lepisosteus_oculatus
ENSPMAG00000004551	pcbp3	88	72.727	ENSMAMG00000022336	pcbp3	91	72.727	Mastacembelus_armatus
ENSPMAG00000004551	pcbp3	91	71.924	ENSMAMG00000011620	-	97	71.924	Mastacembelus_armatus
ENSPMAG00000004551	pcbp3	90	66.172	ENSMZEG00005008993	pcbp3	96	66.970	Maylandia_zebra
ENSPMAG00000004551	pcbp3	90	66.769	ENSMZEG00005014882	-	95	66.769	Maylandia_zebra
ENSPMAG00000004551	pcbp3	88	65.217	ENSMGAG00000001883	-	95	64.928	Meleagris_gallopavo
ENSPMAG00000004551	pcbp3	89	64.266	ENSMGAG00000006794	-	75	64.266	Meleagris_gallopavo
ENSPMAG00000004551	pcbp3	91	71.069	ENSMMOG00000005216	-	97	71.069	Mola_mola
ENSPMAG00000004551	pcbp3	88	71.935	ENSMMOG00000000730	pcbp3	86	71.935	Mola_mola
ENSPMAG00000004551	pcbp3	65	62.100	ENSMODG00000027884	-	93	62.963	Monodelphis_domestica
ENSPMAG00000004551	pcbp3	88	67.372	ENSMALG00000000691	pcbp3	97	66.129	Monopterus_albus
ENSPMAG00000004551	pcbp3	91	66.667	ENSMPUG00000001779	-	90	66.667	Mustela_putorius_furo
ENSPMAG00000004551	pcbp3	90	66.769	ENSNBRG00000016714	-	99	65.361	Neolamprologus_brichardi
ENSPMAG00000004551	pcbp3	90	66.667	ENSNBRG00000016409	-	95	66.667	Neolamprologus_brichardi
ENSPMAG00000004551	pcbp3	88	65.896	ENSOPRG00000003431	-	99	65.896	Ochotona_princeps
ENSPMAG00000004551	pcbp3	90	65.352	ENSONIG00000012122	-	98	65.352	Oreochromis_niloticus
ENSPMAG00000004551	pcbp3	91	74.214	ENSONIG00000004611	-	98	74.214	Oreochromis_niloticus
ENSPMAG00000004551	pcbp3	91	74.684	ENSOCUG00000002696	-	89	74.684	Oryctolagus_cuniculus
ENSPMAG00000004551	pcbp3	88	74.757	ENSORLG00000000059	pcbp3	98	74.757	Oryzias_latipes
ENSPMAG00000004551	pcbp3	91	73.585	ENSORLG00000022739	-	98	73.585	Oryzias_latipes
ENSPMAG00000004551	pcbp3	88	74.757	ENSORLG00020012671	pcbp3	96	74.757	Oryzias_latipes_hni
ENSPMAG00000004551	pcbp3	91	73.270	ENSORLG00020006124	-	98	73.270	Oryzias_latipes_hni
ENSPMAG00000004551	pcbp3	88	74.757	ENSORLG00015000429	pcbp3	96	74.757	Oryzias_latipes_hsok
ENSPMAG00000004551	pcbp3	88	75.081	ENSORLG00015008051	-	93	75.081	Oryzias_latipes_hsok
ENSPMAG00000004551	pcbp3	82	73.427	ENSOMEG00000020811	pcbp3	97	73.427	Oryzias_melastigma
ENSPMAG00000004551	pcbp3	91	73.585	ENSOMEG00000020162	-	98	73.585	Oryzias_melastigma
ENSPMAG00000004551	pcbp3	91	65.738	ENSOGAG00000008044	-	98	65.738	Otolemur_garnettii
ENSPMAG00000004551	pcbp3	90	75.080	ENSPKIG00000019329	pcbp3	94	75.080	Paramormyrops_kingsleyae
ENSPMAG00000004551	pcbp3	82	66.327	ENSPKIG00000020913	-	83	66.327	Paramormyrops_kingsleyae
ENSPMAG00000004551	pcbp3	91	64.048	ENSPSIG00000014970	-	98	64.565	Pelodiscus_sinensis
ENSPMAG00000004551	pcbp3	66	69.685	ENSPSIG00000008350	-	73	69.685	Pelodiscus_sinensis
ENSPMAG00000004551	pcbp3	88	68.882	ENSPMGG00000022383	pcbp3	93	68.882	Periophthalmus_magnuspinnatus
ENSPMAG00000004551	pcbp3	91	69.118	ENSPCIG00000028092	-	96	73.516	Phascolarctos_cinereus
ENSPMAG00000004551	pcbp3	88	63.218	ENSPLAG00000011449	pcbp3	86	63.218	Poecilia_latipinna
ENSPMAG00000004551	pcbp3	91	69.725	ENSPLAG00000004074	-	91	69.725	Poecilia_latipinna
ENSPMAG00000004551	pcbp3	88	68.862	ENSPMEG00000021239	pcbp3	93	68.862	Poecilia_mexicana
ENSPMAG00000004551	pcbp3	91	66.962	ENSPMEG00000006653	-	98	67.257	Poecilia_mexicana
ENSPMAG00000004551	pcbp3	88	70.418	ENSPREG00000015736	pcbp3	97	70.418	Poecilia_reticulata
ENSPMAG00000004551	pcbp3	91	71.698	ENSPREG00000020585	-	97	71.698	Poecilia_reticulata
ENSPMAG00000004551	pcbp3	91	72.013	ENSPNYG00000013205	-	97	72.013	Pundamilia_nyererei
ENSPMAG00000004551	pcbp3	88	71.845	ENSPNYG00000012326	pcbp3	94	71.845	Pundamilia_nyererei
ENSPMAG00000004551	pcbp3	91	73.585	ENSPNAG00000015104	pcbp3	98	73.585	Pygocentrus_nattereri
ENSPMAG00000004551	pcbp3	88	73.290	ENSPNAG00000008541	-	96	73.290	Pygocentrus_nattereri
ENSPMAG00000004551	pcbp3	91	74.132	ENSRNOG00000001245	Pcbp3	98	74.132	Rattus_norvegicus
ENSPMAG00000004551	pcbp3	91	66.565	ENSRBIG00000028177	-	98	59.239	Rhinopithecus_bieti
ENSPMAG00000004551	pcbp3	91	70.571	ENSSHAG00000007890	-	98	70.571	Sarcophilus_harrisii
ENSPMAG00000004551	pcbp3	89	69.032	ENSSFOG00015007118	-	94	69.032	Scleropages_formosus
ENSPMAG00000004551	pcbp3	91	68.421	ENSSFOG00015014706	pcbp3	97	68.421	Scleropages_formosus
ENSPMAG00000004551	pcbp3	90	74.760	ENSSFOG00015010205	pcbp3	94	74.760	Scleropages_formosus
ENSPMAG00000004551	pcbp3	91	73.899	ENSSMAG00000003135	-	98	73.899	Scophthalmus_maximus
ENSPMAG00000004551	pcbp3	89	71.203	ENSSMAG00000011929	pcbp3	98	71.203	Scophthalmus_maximus
ENSPMAG00000004551	pcbp3	90	68.770	ENSSDUG00000008502	-	99	66.881	Seriola_dumerili
ENSPMAG00000004551	pcbp3	89	67.267	ENSSDUG00000011608	pcbp3	98	67.267	Seriola_dumerili
ENSPMAG00000004551	pcbp3	90	74.522	ENSSLDG00000020161	-	94	74.522	Seriola_lalandi_dorsalis
ENSPMAG00000004551	pcbp3	89	67.267	ENSSLDG00000008518	pcbp3	98	67.267	Seriola_lalandi_dorsalis
ENSPMAG00000004551	pcbp3	84	69.036	ENSSPUG00000013214	-	91	68.601	Sphenodon_punctatus
ENSPMAG00000004551	pcbp3	81	71.233	ENSSPAG00000004190	-	99	71.233	Stegastes_partitus
ENSPMAG00000004551	pcbp3	90	56.973	ENSSPAG00000023341	-	94	56.973	Stegastes_partitus
ENSPMAG00000004551	pcbp3	91	67.964	ENSTGUG00000003316	-	98	67.964	Taeniopygia_guttata
ENSPMAG00000004551	pcbp3	91	72.812	ENSTGUG00000008158	-	99	72.812	Taeniopygia_guttata
ENSPMAG00000004551	pcbp3	88	73.883	ENSTRUG00000006280	-	91	73.883	Takifugu_rubripes
ENSPMAG00000004551	pcbp3	90	69.113	ENSTRUG00000013604	pcbp3	95	69.113	Takifugu_rubripes
ENSPMAG00000004551	pcbp3	91	65.169	ENSTTRG00000015075	-	98	65.169	Tursiops_truncatus
ENSPMAG00000004551	pcbp3	85	64.058	ENSXETG00000010491	pcbp2	75	64.058	Xenopus_tropicalis
ENSPMAG00000004551	pcbp3	91	71.557	ENSXETG00000011483	pcbp1	98	71.557	Xenopus_tropicalis
ENSPMAG00000004551	pcbp3	88	68.862	ENSXCOG00000020481	pcbp3	93	68.862	Xiphophorus_couchianus
ENSPMAG00000004551	pcbp3	90	74.522	ENSXMAG00000028711	-	94	74.522	Xiphophorus_maculatus
ENSPMAG00000004551	pcbp3	90	68.843	ENSXMAG00000008175	pcbp3	95	68.843	Xiphophorus_maculatus