EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004595 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 4253 bases
Position: chrGL479852:67033-71285
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005043	zf-C2H2	PF00096.26	2.8e-22	1	5
ENSPMAP00000005043	zf-C2H2	PF00096.26	2.8e-22	2	5
ENSPMAP00000005043	zf-C2H2	PF00096.26	2.8e-22	3	5
ENSPMAP00000005043	zf-C2H2	PF00096.26	2.8e-22	4	5
ENSPMAP00000005043	zf-C2H2	PF00096.26	2.8e-22	5	5
ENSPMAP00000005043	zf-met	PF12874.7	5.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005062	-	2640	-	ENSPMAP00000005043	880 (aa)	-	S4RIL1

Gene Model

Click here to download ENSPMAG00000004595's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004595's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004595	-	52	63.462	ENSG00000256463	SALL3	64	78.082	Homo_sapiens
ENSPMAG00000004595	-	65	63.462	ENSAMEG00000010206	SALL3	71	77.778	Ailuropoda_melanoleuca
ENSPMAG00000004595	-	70	62.162	ENSANAG00000032412	SALL3	77	79.452	Aotus_nancymaae
ENSPMAG00000004595	-	64	63.462	ENSBTAG00000050200	SALL3	72	78.082	Bos_taurus
ENSPMAG00000004595	-	70	63.462	ENSCJAG00000007332	SALL3	62	78.082	Callithrix_jacchus
ENSPMAG00000004595	-	50	63.462	ENSCAFG00000000013	SALL3	53	76.923	Canis_familiaris
ENSPMAG00000004595	-	50	63.462	ENSCAFG00020015092	SALL3	50	78.082	Canis_lupus_dingo
ENSPMAG00000004595	-	55	63.462	ENSCHIG00000000145	SALL3	72	78.082	Capra_hircus
ENSPMAG00000004595	-	51	63.462	ENSCAPG00000006496	SALL3	55	78.022	Cavia_aperea
ENSPMAG00000004595	-	74	63.462	ENSCPOG00000008546	SALL3	76	63.462	Cavia_porcellus
ENSPMAG00000004595	-	66	63.462	ENSCATG00000029727	SALL3	60	78.082	Cercocebus_atys
ENSPMAG00000004595	-	52	63.462	ENSCSAG00000018244	SALL3	60	78.082	Chlorocebus_sabaeus
ENSPMAG00000004595	-	51	63.462	ENSCPBG00000003657	SALL3	61	78.022	Chrysemys_picta_bellii
ENSPMAG00000004595	-	66	62.264	ENSCANG00000030302	SALL3	59	78.022	Colobus_angolensis_palliatus
ENSPMAG00000004595	-	68	63.462	ENSCGRG00001018203	Sall3	60	78.022	Cricetulus_griseus_chok1gshd
ENSPMAG00000004595	-	62	61.832	ENSCGRG00000017127	Sall3	61	78.022	Cricetulus_griseus_crigri
ENSPMAG00000004595	-	55	77.922	ENSCVAG00000017005	sall3b	63	77.922	Cyprinodon_variegatus
ENSPMAG00000004595	-	64	63.462	ENSEASG00005002071	SALL3	57	63.462	Equus_asinus_asinus
ENSPMAG00000004595	-	79	63.462	ENSECAG00000015414	SALL3	74	63.462	Equus_caballus
ENSPMAG00000004595	-	51	63.462	ENSGGOG00000008127	SALL3	55	78.082	Gorilla_gorilla
ENSPMAG00000004595	-	57	63.462	ENSHGLG00000000824	SALL3	74	63.462	Heterocephalus_glaber_female
ENSPMAG00000004595	-	60	63.462	ENSHGLG00100008694	SALL3	74	63.462	Heterocephalus_glaber_male
ENSPMAG00000004595	-	57	78.750	ENSIPUG00000003006	sall3b	59	71.579	Ictalurus_punctatus
ENSPMAG00000004595	-	53	63.462	ENSJJAG00000014351	Sall3	57	78.082	Jaculus_jaculus
ENSPMAG00000004595	-	94	63.462	ENSLOCG00000007831	sall3a	59	78.022	Lepisosteus_oculatus
ENSPMAG00000004595	-	77	63.462	ENSMFAG00000031402	SALL3	57	78.082	Macaca_fascicularis
ENSPMAG00000004595	-	52	63.462	ENSMMUG00000000286	SALL3	53	78.082	Macaca_mulatta
ENSPMAG00000004595	-	67	63.462	ENSMNEG00000029916	SALL3	60	78.082	Macaca_nemestrina
ENSPMAG00000004595	-	58	63.462	ENSMICG00000017395	SALL3	58	78.082	Microcebus_murinus
ENSPMAG00000004595	-	61	63.462	ENSMOCG00000013205	Sall3	60	78.022	Microtus_ochrogaster
ENSPMAG00000004595	-	58	63.462	ENSMODG00000012231	SALL3	60	78.022	Monodelphis_domestica
ENSPMAG00000004595	-	73	63.462	MGP_PahariEiJ_G0019170	Sall3	60	78.022	Mus_pahari
ENSPMAG00000004595	-	79	63.462	ENSNGAG00000023772	Sall3	54	78.082	Nannospalax_galili
ENSPMAG00000004595	-	66	63.462	ENSODEG00000002692	SALL3	70	78.082	Octodon_degus
ENSPMAG00000004595	-	84	80.247	ENSORLG00015005877	sall3b	56	80.247	Oryzias_latipes_hsok
ENSPMAG00000004595	-	61	63.462	ENSOGAG00000031681	SALL3	70	78.082	Otolemur_garnettii
ENSPMAG00000004595	-	54	68.182	ENSPPAG00000029586	-	78	78.022	Pan_paniscus
ENSPMAG00000004595	-	66	63.462	ENSPTRG00000010126	SALL3	70	78.082	Pan_troglodytes
ENSPMAG00000004595	-	61	63.462	ENSPANG00000006485	SALL3	59	78.022	Papio_anubis
ENSPMAG00000004595	-	61	63.462	ENSPSIG00000008556	SALL3	62	78.022	Pelodiscus_sinensis
ENSPMAG00000004595	-	70	63.462	ENSPEMG00000022799	Sall3	57	78.082	Peromyscus_maniculatus_bairdii
ENSPMAG00000004595	-	64	63.462	ENSPCIG00000002472	SALL3	63	78.082	Phascolarctos_cinereus
ENSPMAG00000004595	-	71	79.452	ENSPFOG00000013292	sall3b	60	79.452	Poecilia_formosa
ENSPMAG00000004595	-	73	79.452	ENSPLAG00000013919	sall3b	61	79.452	Poecilia_latipinna
ENSPMAG00000004595	-	59	63.462	ENSPCAG00000006522	SALL3	61	78.022	Procavia_capensis
ENSPMAG00000004595	-	51	63.462	ENSRROG00000034130	SALL3	55	78.082	Rhinopithecus_roxellana
ENSPMAG00000004595	-	60	63.462	ENSSHAG00000015872	SALL3	57	63.462	Sarcophilus_harrisii
ENSPMAG00000004595	-	87	78.022	ENSSFOG00015012223	sall3a	56	78.022	Scleropages_formosus
ENSPMAG00000004595	-	79	63.462	ENSSSCG00000004858	SALL3	70	79.452	Sus_scrofa
ENSPMAG00000004595	-	50	63.462	ENSUAMG00000016908	SALL3	57	78.082	Ursus_americanus
ENSPMAG00000004595	-	75	80.822	ENSXCOG00000018799	sall3b	87	31.027	Xiphophorus_couchianus
ENSPMAG00000004595	-	54	84.615	ENSXMAG00000000798	sall3b	50	84.615	Xiphophorus_maculatus