EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004636 (Gene tree)
Gene ID: -
Gene Symbol: pus1
Alias: -
Full Name: pseudouridine synthase 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5841 bases
Position: chrGL480125:12705-18545
Accession: ZDB-GENE-041212-26
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005088	PseudoU_synth_1	PF01416.20	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005107	-	990	-	ENSPMAP00000005088	330 (aa)	-	S4RIQ6

Gene Model

Click here to download ENSPMAG00000004636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004636's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004636	pus1	100	60.606	ENSG00000177192	PUS1	86	60.606	Homo_sapiens
ENSPMAG00000004636	pus1	99	59.146	ENSAPOG00000007254	pus1	78	59.146	Acanthochromis_polyacanthus
ENSPMAG00000004636	pus1	99	59.633	ENSAMEG00000013715	PUS1	80	59.633	Ailuropoda_melanoleuca
ENSPMAG00000004636	pus1	99	59.819	ENSACIG00000009169	pus1	80	59.819	Amphilophus_citrinellus
ENSPMAG00000004636	pus1	99	59.756	ENSAOCG00000022207	pus1	78	59.756	Amphiprion_ocellaris
ENSPMAG00000004636	pus1	99	59.756	ENSAPEG00000006039	pus1	84	59.756	Amphiprion_percula
ENSPMAG00000004636	pus1	99	59.451	ENSATEG00000020688	pus1	84	59.451	Anabas_testudineus
ENSPMAG00000004636	pus1	98	59.259	ENSACAG00000007367	PUS1	87	59.259	Anolis_carolinensis
ENSPMAG00000004636	pus1	91	59.801	ENSANAG00000036192	PUS1	92	59.801	Aotus_nancymaae
ENSPMAG00000004636	pus1	99	59.036	ENSACLG00000020868	pus1	85	59.036	Astatotilapia_calliptera
ENSPMAG00000004636	pus1	98	60.185	ENSAMXG00000008710	pus1	75	60.185	Astyanax_mexicanus
ENSPMAG00000004636	pus1	99	59.756	ENSBTAG00000012990	PUS1	82	59.756	Bos_taurus
ENSPMAG00000004636	pus1	98	39.359	WBGene00004248	pus-1	81	39.359	Caenorhabditis_elegans
ENSPMAG00000004636	pus1	77	57.480	ENSCJAG00000003720	PUS1	70	57.031	Callithrix_jacchus
ENSPMAG00000004636	pus1	99	60.061	ENSCAFG00000006429	PUS1	82	60.061	Canis_familiaris
ENSPMAG00000004636	pus1	99	60.061	ENSCAFG00020010737	PUS1	76	60.061	Canis_lupus_dingo
ENSPMAG00000004636	pus1	99	59.756	ENSCHIG00000000487	PUS1	82	59.756	Capra_hircus
ENSPMAG00000004636	pus1	99	62.310	ENSTSYG00000032605	PUS1	90	61.934	Carlito_syrichta
ENSPMAG00000004636	pus1	90	61.074	ENSCAPG00000006421	PUS1	93	60.465	Cavia_aperea
ENSPMAG00000004636	pus1	98	61.728	ENSCPOG00000001027	PUS1	77	61.162	Cavia_porcellus
ENSPMAG00000004636	pus1	99	61.585	ENSCCAG00000015879	PUS1	84	59.736	Cebus_capucinus
ENSPMAG00000004636	pus1	100	60.909	ENSCATG00000032870	PUS1	83	60.066	Cercocebus_atys
ENSPMAG00000004636	pus1	98	61.420	ENSCLAG00000011689	PUS1	77	60.856	Chinchilla_lanigera
ENSPMAG00000004636	pus1	100	61.212	ENSCSAG00000001879	PUS1	77	61.212	Chlorocebus_sabaeus
ENSPMAG00000004636	pus1	93	57.843	ENSCPBG00000024715	PUS1	87	57.843	Chrysemys_picta_bellii
ENSPMAG00000004636	pus1	97	45.141	ENSCING00000009426	-	85	45.141	Ciona_intestinalis
ENSPMAG00000004636	pus1	97	42.320	ENSCSAVG00000003751	-	66	42.320	Ciona_savignyi
ENSPMAG00000004636	pus1	100	52.727	ENSCANG00000035561	PUS1	83	52.941	Colobus_angolensis_palliatus
ENSPMAG00000004636	pus1	99	60.856	ENSCGRG00001019592	Pus1	77	60.856	Cricetulus_griseus_chok1gshd
ENSPMAG00000004636	pus1	99	60.856	ENSCGRG00000004048	Pus1	83	60.856	Cricetulus_griseus_crigri
ENSPMAG00000004636	pus1	99	58.055	ENSCSEG00000003629	pus1	78	58.055	Cynoglossus_semilaevis
ENSPMAG00000004636	pus1	98	61.231	ENSCVAG00000001265	pus1	79	61.231	Cyprinodon_variegatus
ENSPMAG00000004636	pus1	99	57.492	ENSDARG00000045562	pus1	94	54.753	Danio_rerio
ENSPMAG00000004636	pus1	98	62.539	ENSDNOG00000045576	PUS1	93	61.386	Dasypus_novemcinctus
ENSPMAG00000004636	pus1	91	59.801	ENSDORG00000011455	Pus1	92	59.801	Dipodomys_ordii
ENSPMAG00000004636	pus1	99	43.072	FBgn0038811	PUS1	80	43.072	Drosophila_melanogaster
ENSPMAG00000004636	pus1	97	65.109	ENSETEG00000019160	PUS1	79	64.815	Echinops_telfairi
ENSPMAG00000004636	pus1	97	47.522	ENSEBUG00000000368	-	63	47.522	Eptatretus_burgeri
ENSPMAG00000004636	pus1	99	60.061	ENSEASG00005016535	PUS1	76	60.061	Equus_asinus_asinus
ENSPMAG00000004636	pus1	99	60.061	ENSECAG00000006965	PUS1	82	60.061	Equus_caballus
ENSPMAG00000004636	pus1	98	59.385	ENSELUG00000010424	pus1	83	59.385	Esox_lucius
ENSPMAG00000004636	pus1	99	61.468	ENSFCAG00000010780	PUS1	77	61.468	Felis_catus
ENSPMAG00000004636	pus1	99	59.327	ENSFALG00000008273	PUS1	77	59.327	Ficedula_albicollis
ENSPMAG00000004636	pus1	99	60.856	ENSFDAG00000012518	PUS1	80	60.856	Fukomys_damarensis
ENSPMAG00000004636	pus1	99	60.061	ENSFHEG00000010504	pus1	79	60.061	Fundulus_heteroclitus
ENSPMAG00000004636	pus1	98	59.385	ENSGMOG00000008143	pus1	84	59.385	Gadus_morhua
ENSPMAG00000004636	pus1	100	60.060	ENSGALG00000002354	PUS1	81	60.060	Gallus_gallus
ENSPMAG00000004636	pus1	99	60.182	ENSGAFG00000006578	pus1	79	60.182	Gambusia_affinis
ENSPMAG00000004636	pus1	99	61.585	ENSGACG00000017566	pus1	84	61.585	Gasterosteus_aculeatus
ENSPMAG00000004636	pus1	93	56.536	ENSGAGG00000016730	-	88	56.536	Gopherus_agassizii
ENSPMAG00000004636	pus1	100	60.909	ENSGGOG00000009178	PUS1	81	60.066	Gorilla_gorilla
ENSPMAG00000004636	pus1	99	59.337	ENSHBUG00000001316	pus1	84	59.337	Haplochromis_burtoni
ENSPMAG00000004636	pus1	99	60.550	ENSHGLG00000016086	PUS1	84	60.550	Heterocephalus_glaber_female
ENSPMAG00000004636	pus1	99	60.245	ENSHGLG00100019362	PUS1	84	60.245	Heterocephalus_glaber_male
ENSPMAG00000004636	pus1	98	60.308	ENSHCOG00000014288	pus1	75	60.308	Hippocampus_comes
ENSPMAG00000004636	pus1	99	60.245	ENSIPUG00000010387	pus1	83	60.245	Ictalurus_punctatus
ENSPMAG00000004636	pus1	99	60.550	ENSSTOG00000011245	PUS1	77	60.550	Ictidomys_tridecemlineatus
ENSPMAG00000004636	pus1	99	60.245	ENSJJAG00000000088	Pus1	77	60.245	Jaculus_jaculus
ENSPMAG00000004636	pus1	99	57.317	ENSKMAG00000012702	pus1	79	57.317	Kryptolebias_marmoratus
ENSPMAG00000004636	pus1	99	59.091	ENSLBEG00000002845	pus1	81	59.091	Labrus_bergylta
ENSPMAG00000004636	pus1	97	53.894	ENSLACG00000016044	-	97	53.894	Latimeria_chalumnae
ENSPMAG00000004636	pus1	99	57.012	ENSLACG00000018598	PUS1	82	57.012	Latimeria_chalumnae
ENSPMAG00000004636	pus1	99	59.021	ENSLOCG00000006127	pus1	83	59.021	Lepisosteus_oculatus
ENSPMAG00000004636	pus1	98	61.420	ENSLAFG00000028731	PUS1	87	61.420	Loxodonta_africana
ENSPMAG00000004636	pus1	98	61.300	ENSMFAG00000041194	PUS1	83	60.066	Macaca_fascicularis
ENSPMAG00000004636	pus1	100	61.212	ENSMMUG00000031463	PUS1	87	60.396	Macaca_mulatta
ENSPMAG00000004636	pus1	100	61.212	ENSMNEG00000002814	PUS1	83	60.396	Macaca_nemestrina
ENSPMAG00000004636	pus1	92	60.396	ENSMLEG00000043560	PUS1	92	60.465	Mandrillus_leucophaeus
ENSPMAG00000004636	pus1	98	59.077	ENSMAMG00000007371	pus1	77	59.077	Mastacembelus_armatus
ENSPMAG00000004636	pus1	99	59.337	ENSMZEG00005017746	pus1	78	59.337	Maylandia_zebra
ENSPMAG00000004636	pus1	92	58.940	ENSMGAG00000001958	PUS1	92	58.940	Meleagris_gallopavo
ENSPMAG00000004636	pus1	99	61.162	ENSMAUG00000001482	Pus1	77	61.162	Mesocricetus_auratus
ENSPMAG00000004636	pus1	98	60.870	ENSMICG00000030980	PUS1	81	60.550	Microcebus_murinus
ENSPMAG00000004636	pus1	99	60.245	ENSMOCG00000022311	Pus1	77	60.245	Microtus_ochrogaster
ENSPMAG00000004636	pus1	99	60.542	ENSMMOG00000021022	pus1	84	60.923	Mola_mola
ENSPMAG00000004636	pus1	96	58.491	ENSMODG00000015551	PUS1	72	58.567	Monodelphis_domestica
ENSPMAG00000004636	pus1	99	58.006	ENSMALG00000013202	pus1	79	58.006	Monopterus_albus
ENSPMAG00000004636	pus1	99	60.550	MGP_CAROLIEiJ_G0027551	Pus1	83	60.550	Mus_caroli
ENSPMAG00000004636	pus1	99	60.550	ENSMUSG00000029507	Pus1	83	60.550	Mus_musculus
ENSPMAG00000004636	pus1	99	60.550	MGP_PahariEiJ_G0024133	Pus1	83	60.550	Mus_pahari
ENSPMAG00000004636	pus1	99	60.550	MGP_SPRETEiJ_G0028549	Pus1	83	60.550	Mus_spretus
ENSPMAG00000004636	pus1	100	61.027	ENSMPUG00000002314	PUS1	84	61.027	Mustela_putorius_furo
ENSPMAG00000004636	pus1	99	58.716	ENSMLUG00000015790	PUS1	90	58.716	Myotis_lucifugus
ENSPMAG00000004636	pus1	100	60.303	ENSNGAG00000012976	Pus1	78	60.303	Nannospalax_galili
ENSPMAG00000004636	pus1	99	59.036	ENSNBRG00000020502	pus1	88	59.036	Neolamprologus_brichardi
ENSPMAG00000004636	pus1	100	60.303	ENSNLEG00000008505	PUS1	92	61.301	Nomascus_leucogenys
ENSPMAG00000004636	pus1	98	50.462	ENSMEUG00000002825	PUS1	88	50.462	Notamacropus_eugenii
ENSPMAG00000004636	pus1	100	53.172	ENSOPRG00000002701	-	87	53.172	Ochotona_princeps
ENSPMAG00000004636	pus1	99	61.468	ENSODEG00000008248	PUS1	86	61.468	Octodon_degus
ENSPMAG00000004636	pus1	99	58.457	ENSONIG00000003803	pus1	94	55.090	Oreochromis_niloticus
ENSPMAG00000004636	pus1	99	56.881	ENSOANG00000010619	PUS1	75	56.881	Ornithorhynchus_anatinus
ENSPMAG00000004636	pus1	98	60.615	ENSOCUG00000007310	PUS1	71	60.366	Oryctolagus_cuniculus
ENSPMAG00000004636	pus1	99	59.215	ENSORLG00000010787	pus1	79	59.215	Oryzias_latipes
ENSPMAG00000004636	pus1	99	59.517	ENSORLG00020011483	pus1	79	59.517	Oryzias_latipes_hni
ENSPMAG00000004636	pus1	99	59.517	ENSORLG00015023012	pus1	84	59.517	Oryzias_latipes_hsok
ENSPMAG00000004636	pus1	99	60.671	ENSOMEG00000022655	pus1	77	60.671	Oryzias_melastigma
ENSPMAG00000004636	pus1	98	60.308	ENSOGAG00000008720	PUS1	85	59.939	Otolemur_garnettii
ENSPMAG00000004636	pus1	99	59.756	ENSOARG00000013316	PUS1	76	59.756	Ovis_aries
ENSPMAG00000004636	pus1	100	60.303	ENSPPAG00000040971	PUS1	81	59.406	Pan_paniscus
ENSPMAG00000004636	pus1	99	61.468	ENSPPRG00000015456	PUS1	83	61.468	Panthera_pardus
ENSPMAG00000004636	pus1	98	62.037	ENSPTIG00000004201	PUS1	85	61.468	Panthera_tigris_altaica
ENSPMAG00000004636	pus1	100	60.000	ENSPTRG00000005643	PUS1	81	59.076	Pan_troglodytes
ENSPMAG00000004636	pus1	100	61.212	ENSPANG00000000376	PUS1	83	60.396	Papio_anubis
ENSPMAG00000004636	pus1	98	58.951	ENSPKIG00000019369	pus1	74	58.951	Paramormyrops_kingsleyae
ENSPMAG00000004636	pus1	99	58.716	ENSPSIG00000016432	PUS1	76	58.716	Pelodiscus_sinensis
ENSPMAG00000004636	pus1	99	59.146	ENSPMGG00000004522	pus1	86	59.146	Periophthalmus_magnuspinnatus
ENSPMAG00000004636	pus1	99	60.550	ENSPEMG00000013448	Pus1	77	60.550	Peromyscus_maniculatus_bairdii
ENSPMAG00000004636	pus1	77	53.937	ENSPCIG00000022609	-	61	53.937	Phascolarctos_cinereus
ENSPMAG00000004636	pus1	99	60.790	ENSPFOG00000019669	pus1	79	60.790	Poecilia_formosa
ENSPMAG00000004636	pus1	99	60.790	ENSPLAG00000002692	-	79	60.790	Poecilia_latipinna
ENSPMAG00000004636	pus1	99	60.790	ENSPLAG00000007185	pus1	79	60.790	Poecilia_latipinna
ENSPMAG00000004636	pus1	99	60.790	ENSPMEG00000011115	PUS1	80	60.790	Poecilia_mexicana
ENSPMAG00000004636	pus1	99	60.976	ENSPMEG00000006038	pus1	82	60.790	Poecilia_mexicana
ENSPMAG00000004636	pus1	100	61.027	ENSPREG00000007231	pus1	92	61.027	Poecilia_reticulata
ENSPMAG00000004636	pus1	100	60.909	ENSPPYG00000005132	PUS1	78	60.909	Pongo_abelii
ENSPMAG00000004636	pus1	77	60.000	ENSPCAG00000009110	-	62	60.000	Procavia_capensis
ENSPMAG00000004636	pus1	97	54.062	ENSPCOG00000015595	PUS1	80	51.988	Propithecus_coquereli
ENSPMAG00000004636	pus1	99	59.036	ENSPNYG00000013571	pus1	78	59.036	Pundamilia_nyererei
ENSPMAG00000004636	pus1	98	60.494	ENSPNAG00000003938	pus1	77	60.494	Pygocentrus_nattereri
ENSPMAG00000004636	pus1	99	60.245	ENSRNOG00000037500	Pus1	77	60.245	Rattus_norvegicus
ENSPMAG00000004636	pus1	100	60.606	ENSRBIG00000043177	PUS1	84	59.736	Rhinopithecus_bieti
ENSPMAG00000004636	pus1	100	60.606	ENSRROG00000039744	PUS1	82	60.215	Rhinopithecus_roxellana
ENSPMAG00000004636	pus1	90	31.593	YGL063W	-	95	31.593	Saccharomyces_cerevisiae
ENSPMAG00000004636	pus1	98	33.666	YPL212C	-	73	33.666	Saccharomyces_cerevisiae
ENSPMAG00000004636	pus1	100	61.212	ENSSBOG00000023593	PUS1	86	60.000	Saimiri_boliviensis_boliviensis
ENSPMAG00000004636	pus1	99	58.589	ENSSHAG00000013193	PUS1	80	58.589	Sarcophilus_harrisii
ENSPMAG00000004636	pus1	98	60.185	ENSSFOG00015003463	pus1	74	60.185	Scleropages_formosus
ENSPMAG00000004636	pus1	98	59.385	ENSSMAG00000019075	pus1	77	59.385	Scophthalmus_maximus
ENSPMAG00000004636	pus1	99	59.940	ENSSDUG00000007102	pus1	78	59.940	Seriola_dumerili
ENSPMAG00000004636	pus1	99	59.639	ENSSLDG00000022850	pus1	78	59.639	Seriola_lalandi_dorsalis
ENSPMAG00000004636	pus1	91	50.831	ENSSARG00000008367	PUS1	97	50.831	Sorex_araneus
ENSPMAG00000004636	pus1	99	56.881	ENSSPUG00000010009	PUS1	82	56.881	Sphenodon_punctatus
ENSPMAG00000004636	pus1	97	59.627	ENSSPAG00000006272	pus1	82	59.627	Stegastes_partitus
ENSPMAG00000004636	pus1	99	60.061	ENSSSCG00000009741	PUS1	82	60.061	Sus_scrofa
ENSPMAG00000004636	pus1	99	59.327	ENSTGUG00000008068	PUS1	99	59.327	Taeniopygia_guttata
ENSPMAG00000004636	pus1	99	60.725	ENSTRUG00000002198	pus1	85	60.725	Takifugu_rubripes
ENSPMAG00000004636	pus1	98	60.736	ENSTNIG00000003942	pus1	83	60.736	Tetraodon_nigroviridis
ENSPMAG00000004636	pus1	99	60.671	ENSTTRG00000000632	PUS1	78	60.671	Tursiops_truncatus
ENSPMAG00000004636	pus1	99	60.366	ENSUAMG00000017197	PUS1	83	60.366	Ursus_americanus
ENSPMAG00000004636	pus1	99	60.061	ENSUMAG00000002831	PUS1	94	60.383	Ursus_maritimus
ENSPMAG00000004636	pus1	100	60.121	ENSVVUG00000004199	PUS1	76	60.121	Vulpes_vulpes
ENSPMAG00000004636	pus1	99	59.327	ENSXETG00000002030	pus1	82	59.327	Xenopus_tropicalis
ENSPMAG00000004636	pus1	97	44.548	ENSXETG00000033640	-	100	44.548	Xenopus_tropicalis
ENSPMAG00000004636	pus1	99	60.182	ENSXCOG00000004722	pus1	85	60.182	Xiphophorus_couchianus
ENSPMAG00000004636	pus1	99	59.878	ENSXMAG00000000988	pus1	79	59.878	Xiphophorus_maculatus