EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004637 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 14209 bases
Position: chrGL501087:1205-15413
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005086	KH_1	PF00013.29	7.5e-36	1	2
ENSPMAP00000005086	KH_1	PF00013.29	7.5e-36	2	2
ENSPMAP00000005086	KH_2	PF07650.17	7.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005105	-	579	-	ENSPMAP00000005086	193 (aa)	-	S4RIQ4

Gene Model

Click here to download ENSPMAG00000004637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004637	-	78	75.630	ENSPMAG00000004719	zgc:110045	93	75.630
ENSPMAG00000004637	-	76	32.836	ENSPMAG00000005383	igf2bp3	61	32.836
ENSPMAG00000004637	-	83	38.750	ENSPMAG00000009765	-	61	38.750
ENSPMAG00000004637	-	87	36.697	ENSPMAG00000003229	-	73	36.697
ENSPMAG00000004637	-	100	71.795	ENSPMAG00000004551	pcbp3	82	71.795
ENSPMAG00000004637	-	73	42.857	ENSPMAG00000005047	igf2bp2b	55	42.857
ENSPMAG00000004637	-	68	32.353	ENSPMAG00000001644	-	55	31.618
ENSPMAG00000004637	-	82	30.952	ENSPMAG00000008286	-	76	30.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004637	-	97	85.106	ENSAPOG00000020003	pcbp3	67	85.106	Acanthochromis_polyacanthus
ENSPMAG00000004637	-	97	88.830	ENSAPOG00000016582	-	76	88.830	Acanthochromis_polyacanthus
ENSPMAG00000004637	-	100	89.119	ENSAMEG00000001697	-	72	89.119	Ailuropoda_melanoleuca
ENSPMAG00000004637	-	97	84.574	ENSACIG00000010933	pcbp3	93	84.574	Amphilophus_citrinellus
ENSPMAG00000004637	-	97	84.043	ENSACIG00000002739	-	76	84.043	Amphilophus_citrinellus
ENSPMAG00000004637	-	97	89.362	ENSAOCG00000008592	-	82	89.362	Amphiprion_ocellaris
ENSPMAG00000004637	-	93	87.742	ENSAOCG00000007806	-	82	87.742	Amphiprion_ocellaris
ENSPMAG00000004637	-	97	85.638	ENSAPEG00000005209	-	77	85.638	Amphiprion_percula
ENSPMAG00000004637	-	97	89.362	ENSAPEG00000008011	pcbp3	69	89.362	Amphiprion_percula
ENSPMAG00000004637	-	97	85.106	ENSATEG00000015787	-	73	85.106	Anabas_testudineus
ENSPMAG00000004637	-	97	84.574	ENSATEG00000009833	-	77	84.574	Anabas_testudineus
ENSPMAG00000004637	-	99	92.188	ENSAPLG00000008951	-	57	92.188	Anas_platyrhynchos
ENSPMAG00000004637	-	100	89.119	ENSAPLG00000002975	-	76	89.119	Anas_platyrhynchos
ENSPMAG00000004637	-	99	91.146	ENSACAG00000009819	-	74	91.146	Anolis_carolinensis
ENSPMAG00000004637	-	100	89.119	ENSACAG00000004607	-	79	89.119	Anolis_carolinensis
ENSPMAG00000004637	-	93	89.286	ENSANAG00000030702	-	91	88.636	Aotus_nancymaae
ENSPMAG00000004637	-	97	88.830	ENSACLG00000011835	pcbp3	69	88.830	Astatotilapia_calliptera
ENSPMAG00000004637	-	97	88.298	ENSACLG00000003801	-	78	88.298	Astatotilapia_calliptera
ENSPMAG00000004637	-	97	84.574	ENSAMXG00000013588	-	78	84.574	Astyanax_mexicanus
ENSPMAG00000004637	-	94	72.928	ENSAMXG00000001760	zgc:110045	51	72.928	Astyanax_mexicanus
ENSPMAG00000004637	-	99	88.021	ENSAMXG00000003440	pcbp3	72	88.021	Astyanax_mexicanus
ENSPMAG00000004637	-	100	89.119	ENSCAFG00020019472	-	69	89.119	Canis_lupus_dingo
ENSPMAG00000004637	-	100	89.119	ENSCSAG00000007440	-	72	89.119	Chlorocebus_sabaeus
ENSPMAG00000004637	-	100	89.119	ENSCPBG00000012151	-	84	89.119	Chrysemys_picta_bellii
ENSPMAG00000004637	-	99	91.667	ENSCPBG00000000733	-	66	91.667	Chrysemys_picta_bellii
ENSPMAG00000004637	-	97	87.701	ENSCSEG00000016984	-	75	87.701	Cynoglossus_semilaevis
ENSPMAG00000004637	-	97	88.830	ENSCSEG00000000822	pcbp3	77	88.830	Cynoglossus_semilaevis
ENSPMAG00000004637	-	97	88.298	ENSCVAG00000005262	-	78	88.298	Cyprinodon_variegatus
ENSPMAG00000004637	-	97	89.362	ENSCVAG00000014482	pcbp3	70	89.362	Cyprinodon_variegatus
ENSPMAG00000004637	-	97	89.362	ENSDARG00000054378	pcbp3	78	89.362	Danio_rerio
ENSPMAG00000004637	-	100	69.430	ENSETEG00000015988	-	80	69.430	Echinops_telfairi
ENSPMAG00000004637	-	97	75.532	ENSEBUG00000005495	pcbp3	56	75.532	Eptatretus_burgeri
ENSPMAG00000004637	-	93	73.203	ENSEBUG00000016192	pcbp3	77	73.203	Eptatretus_burgeri
ENSPMAG00000004637	-	100	81.726	ENSEBUG00000007485	-	82	81.726	Eptatretus_burgeri
ENSPMAG00000004637	-	97	90.374	ENSELUG00000003521	pcbp3	90	86.096	Esox_lucius
ENSPMAG00000004637	-	97	89.840	ENSELUG00000001560	-	69	89.840	Esox_lucius
ENSPMAG00000004637	-	100	89.119	ENSFALG00000003949	-	80	89.119	Ficedula_albicollis
ENSPMAG00000004637	-	99	91.146	ENSFALG00000004411	-	53	91.146	Ficedula_albicollis
ENSPMAG00000004637	-	97	85.106	ENSFHEG00000016615	pcbp3	74	85.106	Fundulus_heteroclitus
ENSPMAG00000004637	-	97	84.574	ENSFHEG00000006539	-	77	84.574	Fundulus_heteroclitus
ENSPMAG00000004637	-	85	90.244	ENSGMOG00000011992	pcbp3	68	90.244	Gadus_morhua
ENSPMAG00000004637	-	92	59.218	ENSGMOG00000008611	-	71	60.000	Gadus_morhua
ENSPMAG00000004637	-	100	89.032	ENSGALG00000004394	-	83	89.032	Gallus_gallus
ENSPMAG00000004637	-	99	91.146	ENSGALG00000013155	-	73	91.146	Gallus_gallus
ENSPMAG00000004637	-	97	81.915	ENSGAFG00000011430	pcbp3	70	81.915	Gambusia_affinis
ENSPMAG00000004637	-	97	88.830	ENSGAFG00000010274	-	76	88.830	Gambusia_affinis
ENSPMAG00000004637	-	97	88.298	ENSGACG00000002266	-	77	88.298	Gasterosteus_aculeatus
ENSPMAG00000004637	-	97	84.043	ENSGACG00000014955	-	67	84.043	Gasterosteus_aculeatus
ENSPMAG00000004637	-	93	92.258	ENSGAGG00000000271	-	81	92.258	Gopherus_agassizii
ENSPMAG00000004637	-	100	79.487	ENSGAGG00000006956	-	78	79.487	Gopherus_agassizii
ENSPMAG00000004637	-	97	88.298	ENSHBUG00000021782	-	78	88.298	Haplochromis_burtoni
ENSPMAG00000004637	-	97	88.830	ENSHBUG00000010697	pcbp3	77	84.574	Haplochromis_burtoni
ENSPMAG00000004637	-	97	89.362	ENSHCOG00000017868	pcbp3	76	89.362	Hippocampus_comes
ENSPMAG00000004637	-	97	88.830	ENSHCOG00000006067	-	91	88.830	Hippocampus_comes
ENSPMAG00000004637	-	97	88.298	ENSIPUG00000006238	pcbp3	77	84.043	Ictalurus_punctatus
ENSPMAG00000004637	-	97	89.362	ENSKMAG00000003046	pcbp3	69	89.362	Kryptolebias_marmoratus
ENSPMAG00000004637	-	96	89.189	ENSKMAG00000018530	-	76	89.189	Kryptolebias_marmoratus
ENSPMAG00000004637	-	97	85.106	ENSLBEG00000006201	pcbp3	75	85.106	Labrus_bergylta
ENSPMAG00000004637	-	97	71.277	ENSLBEG00000006542	-	74	71.277	Labrus_bergylta
ENSPMAG00000004637	-	99	90.625	ENSLACG00000010804	zgc:110045	53	90.625	Latimeria_chalumnae
ENSPMAG00000004637	-	100	89.119	ENSLACG00000010386	pcbp3	54	89.119	Latimeria_chalumnae
ENSPMAG00000004637	-	99	90.625	ENSLOCG00000005058	zgc:110045	62	90.625	Lepisosteus_oculatus
ENSPMAG00000004637	-	100	88.601	ENSLOCG00000009369	pcbp3	84	88.601	Lepisosteus_oculatus
ENSPMAG00000004637	-	97	85.106	ENSMAMG00000022336	pcbp3	73	85.106	Mastacembelus_armatus
ENSPMAG00000004637	-	97	85.106	ENSMAMG00000011620	-	77	85.106	Mastacembelus_armatus
ENSPMAG00000004637	-	97	85.027	ENSMZEG00005008993	pcbp3	92	84.574	Maylandia_zebra
ENSPMAG00000004637	-	97	84.043	ENSMZEG00005014882	-	73	84.043	Maylandia_zebra
ENSPMAG00000004637	-	87	89.286	ENSMGAG00000001883	-	67	89.286	Meleagris_gallopavo
ENSPMAG00000004637	-	99	91.146	ENSMGAG00000006794	-	53	91.146	Meleagris_gallopavo
ENSPMAG00000004637	-	97	83.684	ENSMMOG00000000730	pcbp3	69	83.684	Mola_mola
ENSPMAG00000004637	-	97	84.043	ENSMMOG00000005216	-	77	84.043	Mola_mola
ENSPMAG00000004637	-	68	87.719	ENSMODG00000027884	-	66	87.719	Monodelphis_domestica
ENSPMAG00000004637	-	98	85.714	ENSMALG00000000691	pcbp3	93	86.486	Monopterus_albus
ENSPMAG00000004637	-	100	78.756	ENSMPUG00000001779	-	77	78.756	Mustela_putorius_furo
ENSPMAG00000004637	-	97	84.043	ENSNBRG00000016714	-	80	84.043	Neolamprologus_brichardi
ENSPMAG00000004637	-	97	84.574	ENSNBRG00000016409	-	69	84.574	Neolamprologus_brichardi
ENSPMAG00000004637	-	100	85.492	ENSOPRG00000003431	-	82	85.492	Ochotona_princeps
ENSPMAG00000004637	-	97	88.298	ENSONIG00000004611	-	78	88.298	Oreochromis_niloticus
ENSPMAG00000004637	-	97	88.830	ENSONIG00000012122	-	68	88.830	Oreochromis_niloticus
ENSPMAG00000004637	-	100	89.119	ENSOCUG00000002696	-	73	89.119	Oryctolagus_cuniculus
ENSPMAG00000004637	-	97	89.362	ENSORLG00000000059	pcbp3	79	89.362	Oryzias_latipes
ENSPMAG00000004637	-	97	88.830	ENSORLG00000022739	-	91	88.830	Oryzias_latipes
ENSPMAG00000004637	-	97	89.362	ENSORLG00020012671	pcbp3	77	89.362	Oryzias_latipes_hni
ENSPMAG00000004637	-	97	88.830	ENSORLG00020006124	-	77	88.830	Oryzias_latipes_hni
ENSPMAG00000004637	-	97	88.830	ENSORLG00015008051	-	90	88.830	Oryzias_latipes_hsok
ENSPMAG00000004637	-	97	89.362	ENSORLG00015000429	pcbp3	77	89.362	Oryzias_latipes_hsok
ENSPMAG00000004637	-	97	88.830	ENSOMEG00000020162	-	91	88.830	Oryzias_melastigma
ENSPMAG00000004637	-	93	86.747	ENSOMEG00000020811	pcbp3	77	86.747	Oryzias_melastigma
ENSPMAG00000004637	-	100	87.310	ENSOGAG00000008044	-	71	87.310	Otolemur_garnettii
ENSPMAG00000004637	-	99	84.896	ENSPKIG00000020913	-	83	84.896	Paramormyrops_kingsleyae
ENSPMAG00000004637	-	97	88.830	ENSPKIG00000019329	pcbp3	76	88.830	Paramormyrops_kingsleyae
ENSPMAG00000004637	-	100	73.575	ENSPSIG00000014970	-	75	74.611	Pelodiscus_sinensis
ENSPMAG00000004637	-	97	89.362	ENSPMGG00000022383	pcbp3	70	89.362	Periophthalmus_magnuspinnatus
ENSPMAG00000004637	-	100	89.119	ENSPCIG00000028092	-	86	89.119	Phascolarctos_cinereus
ENSPMAG00000004637	-	97	84.574	ENSPLAG00000004074	-	71	84.574	Poecilia_latipinna
ENSPMAG00000004637	-	97	81.579	ENSPLAG00000011449	pcbp3	61	81.579	Poecilia_latipinna
ENSPMAG00000004637	-	97	87.958	ENSPMEG00000021239	pcbp3	76	87.958	Poecilia_mexicana
ENSPMAG00000004637	-	97	84.574	ENSPMEG00000006653	-	90	76.166	Poecilia_mexicana
ENSPMAG00000004637	-	97	88.830	ENSPREG00000020585	-	84	88.830	Poecilia_reticulata
ENSPMAG00000004637	-	97	81.579	ENSPREG00000015736	pcbp3	78	81.579	Poecilia_reticulata
ENSPMAG00000004637	-	97	84.043	ENSPNYG00000013205	-	77	84.043	Pundamilia_nyererei
ENSPMAG00000004637	-	97	84.574	ENSPNYG00000012326	pcbp3	75	84.574	Pundamilia_nyererei
ENSPMAG00000004637	-	97	88.830	ENSPNAG00000015104	pcbp3	78	88.830	Pygocentrus_nattereri
ENSPMAG00000004637	-	97	88.298	ENSPNAG00000008541	-	77	84.043	Pygocentrus_nattereri
ENSPMAG00000004637	-	100	89.119	ENSRNOG00000001245	Pcbp3	80	89.119	Rattus_norvegicus
ENSPMAG00000004637	-	100	74.146	ENSRBIG00000028177	-	85	71.823	Rhinopithecus_bieti
ENSPMAG00000004637	-	100	89.119	ENSSHAG00000007890	-	85	89.119	Sarcophilus_harrisii
ENSPMAG00000004637	-	97	89.362	ENSSFOG00015010205	pcbp3	76	89.362	Scleropages_formosus
ENSPMAG00000004637	-	97	88.298	ENSSFOG00015014706	pcbp3	70	88.298	Scleropages_formosus
ENSPMAG00000004637	-	99	85.417	ENSSFOG00015007118	-	75	85.417	Scleropages_formosus
ENSPMAG00000004637	-	97	88.830	ENSSMAG00000003135	-	78	88.830	Scophthalmus_maximus
ENSPMAG00000004637	-	97	85.106	ENSSMAG00000011929	pcbp3	76	85.106	Scophthalmus_maximus
ENSPMAG00000004637	-	97	85.106	ENSSDUG00000011608	pcbp3	72	85.106	Seriola_dumerili
ENSPMAG00000004637	-	99	85.340	ENSSDUG00000008502	-	91	85.638	Seriola_dumerili
ENSPMAG00000004637	-	97	88.830	ENSSLDG00000020161	-	76	88.830	Seriola_lalandi_dorsalis
ENSPMAG00000004637	-	97	85.106	ENSSLDG00000008518	pcbp3	72	85.106	Seriola_lalandi_dorsalis
ENSPMAG00000004637	-	99	87.500	ENSSPUG00000013214	-	86	87.368	Sphenodon_punctatus
ENSPMAG00000004637	-	97	66.489	ENSSPAG00000023341	-	85	65.957	Stegastes_partitus
ENSPMAG00000004637	-	93	87.742	ENSSPAG00000004190	-	82	87.742	Stegastes_partitus
ENSPMAG00000004637	-	99	91.146	ENSTGUG00000008158	-	80	91.146	Taeniopygia_guttata
ENSPMAG00000004637	-	100	83.420	ENSTGUG00000003316	-	84	83.420	Taeniopygia_guttata
ENSPMAG00000004637	-	93	88.272	ENSTRUG00000006280	-	85	88.272	Takifugu_rubripes
ENSPMAG00000004637	-	97	88.830	ENSTRUG00000013604	pcbp3	82	88.830	Takifugu_rubripes
ENSPMAG00000004637	-	100	88.601	ENSTTRG00000015075	-	79	88.601	Tursiops_truncatus
ENSPMAG00000004637	-	100	89.637	ENSXETG00000011483	pcbp1	84	89.637	Xenopus_tropicalis
ENSPMAG00000004637	-	93	92.529	ENSXETG00000010491	pcbp2	52	92.529	Xenopus_tropicalis
ENSPMAG00000004637	-	97	87.958	ENSXCOG00000020481	pcbp3	76	87.958	Xiphophorus_couchianus
ENSPMAG00000004637	-	97	88.830	ENSXMAG00000028711	-	76	88.830	Xiphophorus_maculatus
ENSPMAG00000004637	-	97	89.362	ENSXMAG00000008175	pcbp3	69	89.362	Xiphophorus_maculatus