EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004744 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162396 (1 of many)
Alias: -
Full Name: zgc:162396
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 8478 bases
Position: chrGL484596:3211-11688
Accession: ZDB-GENE-030131-1190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005210	Methyltransf_31	PF13847.6	5.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005229	-	969	-	ENSPMAP00000005210	231 (aa)	-	S4RJ28

Gene Model

Click here to download ENSPMAG00000004744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004744	zgc:162396	86	88.945	ENSPMAG00000006166	zgc:162396	100	88.945
ENSPMAG00000004744	zgc:162396	86	45.729	ENSPMAG00000003743	zgc:162396	82	45.729

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004744	zgc:162396	97	37.229	ENSAPOG00000015421	zgc:162396	83	37.229	Acanthochromis_polyacanthus
ENSPMAG00000004744	zgc:162396	97	36.087	ENSACIG00000015427	zgc:162396	83	36.087	Amphilophus_citrinellus
ENSPMAG00000004744	zgc:162396	97	36.000	ENSAOCG00000004131	zgc:162396	83	36.000	Amphiprion_ocellaris
ENSPMAG00000004744	zgc:162396	97	36.444	ENSAPEG00000008189	zgc:162396	83	36.444	Amphiprion_percula
ENSPMAG00000004744	zgc:162396	100	38.136	ENSATEG00000011813	zgc:162396	84	38.136	Anabas_testudineus
ENSPMAG00000004744	zgc:162396	97	42.857	ENSAPLG00000012593	-	83	42.857	Anas_platyrhynchos
ENSPMAG00000004744	zgc:162396	98	37.391	ENSACLG00000006906	zgc:162396	83	37.391	Astatotilapia_calliptera
ENSPMAG00000004744	zgc:162396	98	38.496	ENSAMXG00000030552	zgc:162396	83	38.496	Astyanax_mexicanus
ENSPMAG00000004744	zgc:162396	98	34.956	ENSAMXG00000037578	zgc:162396	90	34.956	Astyanax_mexicanus
ENSPMAG00000004744	zgc:162396	98	44.390	ENSCPBG00000002804	-	81	44.390	Chrysemys_picta_bellii
ENSPMAG00000004744	zgc:162396	77	33.333	ENSCING00000012960	-	66	33.333	Ciona_intestinalis
ENSPMAG00000004744	zgc:162396	85	32.000	ENSCING00000014393	-	86	32.000	Ciona_intestinalis
ENSPMAG00000004744	zgc:162396	97	37.991	ENSCVAG00000021429	zgc:162396	83	37.991	Cyprinodon_variegatus
ENSPMAG00000004744	zgc:162396	98	38.496	ENSDARG00000069549	zgc:162396	93	44.068	Danio_rerio
ENSPMAG00000004744	zgc:162396	97	36.161	ENSELUG00000005372	zgc:162396	83	36.161	Esox_lucius
ENSPMAG00000004744	zgc:162396	98	40.969	ENSFALG00000012826	-	84	40.969	Ficedula_albicollis
ENSPMAG00000004744	zgc:162396	97	38.428	ENSFHEG00000005224	-	88	39.269	Fundulus_heteroclitus
ENSPMAG00000004744	zgc:162396	97	44.643	ENSGALG00000047535	-	83	44.643	Gallus_gallus
ENSPMAG00000004744	zgc:162396	97	44.643	ENSGALG00000050548	-	83	44.643	Gallus_gallus
ENSPMAG00000004744	zgc:162396	97	44.643	ENSGALG00000042073	-	83	44.643	Gallus_gallus
ENSPMAG00000004744	zgc:162396	97	36.957	ENSGAFG00000018387	-	83	36.957	Gambusia_affinis
ENSPMAG00000004744	zgc:162396	100	36.596	ENSGACG00000002200	zgc:162396	82	36.596	Gasterosteus_aculeatus
ENSPMAG00000004744	zgc:162396	55	51.587	ENSGAGG00000004677	-	76	51.587	Gopherus_agassizii
ENSPMAG00000004744	zgc:162396	98	36.957	ENSHBUG00000017584	zgc:162396	83	36.957	Haplochromis_burtoni
ENSPMAG00000004744	zgc:162396	98	39.381	ENSIPUG00000001171	-	83	39.381	Ictalurus_punctatus
ENSPMAG00000004744	zgc:162396	98	39.823	ENSIPUG00000001213	-	83	39.823	Ictalurus_punctatus
ENSPMAG00000004744	zgc:162396	98	36.283	ENSIPUG00000001159	zgc:162396	83	36.283	Ictalurus_punctatus
ENSPMAG00000004744	zgc:162396	93	38.073	ENSKMAG00000018426	-	79	38.073	Kryptolebias_marmoratus
ENSPMAG00000004744	zgc:162396	97	38.158	ENSLBEG00000026502	zgc:162396	83	38.158	Labrus_bergylta
ENSPMAG00000004744	zgc:162396	98	39.381	ENSLACG00000009261	-	84	39.381	Latimeria_chalumnae
ENSPMAG00000004744	zgc:162396	92	37.327	ENSMAMG00000013213	zgc:162396	79	37.327	Mastacembelus_armatus
ENSPMAG00000004744	zgc:162396	98	37.391	ENSMZEG00005000798	zgc:162396	83	37.391	Maylandia_zebra
ENSPMAG00000004744	zgc:162396	97	42.105	ENSMGAG00000003269	-	83	42.105	Meleagris_gallopavo
ENSPMAG00000004744	zgc:162396	97	37.719	ENSMMOG00000005445	zgc:162396	83	37.719	Mola_mola
ENSPMAG00000004744	zgc:162396	98	36.957	ENSNBRG00000014954	zgc:162396	83	36.957	Neolamprologus_brichardi
ENSPMAG00000004744	zgc:162396	98	37.826	ENSONIG00000004463	zgc:162396	83	37.826	Oreochromis_niloticus
ENSPMAG00000004744	zgc:162396	98	41.850	ENSOANG00000021828	-	81	41.850	Ornithorhynchus_anatinus
ENSPMAG00000004744	zgc:162396	75	34.682	ENSOANG00000015675	-	98	34.682	Ornithorhynchus_anatinus
ENSPMAG00000004744	zgc:162396	92	40.367	ENSORLG00015008543	zgc:162396	79	40.367	Oryzias_latipes_hsok
ENSPMAG00000004744	zgc:162396	92	41.284	ENSOMEG00000010640	zgc:162396	81	41.667	Oryzias_melastigma
ENSPMAG00000004744	zgc:162396	98	37.281	ENSPKIG00000014798	zgc:162396	95	37.281	Paramormyrops_kingsleyae
ENSPMAG00000004744	zgc:162396	98	42.035	ENSPSIG00000016701	-	83	42.035	Pelodiscus_sinensis
ENSPMAG00000004744	zgc:162396	93	37.104	ENSPFOG00000002666	zgc:162396	79	37.104	Poecilia_formosa
ENSPMAG00000004744	zgc:162396	93	37.557	ENSPLAG00000010281	zgc:162396	79	37.557	Poecilia_latipinna
ENSPMAG00000004744	zgc:162396	93	38.009	ENSPMEG00000002349	zgc:162396	79	38.009	Poecilia_mexicana
ENSPMAG00000004744	zgc:162396	93	38.636	ENSPREG00000016491	zgc:162396	79	38.636	Poecilia_reticulata
ENSPMAG00000004744	zgc:162396	98	37.391	ENSPNYG00000009858	zgc:162396	83	37.391	Pundamilia_nyererei
ENSPMAG00000004744	zgc:162396	98	39.381	ENSPNAG00000026074	zgc:162396	83	39.381	Pygocentrus_nattereri
ENSPMAG00000004744	zgc:162396	98	38.053	ENSPNAG00000004920	zgc:162396	84	38.053	Pygocentrus_nattereri
ENSPMAG00000004744	zgc:162396	98	38.938	ENSSFOG00015023503	zgc:162396	83	38.938	Scleropages_formosus
ENSPMAG00000004744	zgc:162396	97	39.556	ENSSFOG00015023495	zgc:162396	83	39.556	Scleropages_formosus
ENSPMAG00000004744	zgc:162396	93	39.535	ENSSMAG00000004484	zgc:162396	79	39.535	Scophthalmus_maximus
ENSPMAG00000004744	zgc:162396	97	38.596	ENSSDUG00000010278	zgc:162396	83	38.596	Seriola_dumerili
ENSPMAG00000004744	zgc:162396	97	39.035	ENSSLDG00000021423	zgc:162396	83	39.035	Seriola_lalandi_dorsalis
ENSPMAG00000004744	zgc:162396	99	42.105	ENSSPUG00000015532	-	71	42.105	Sphenodon_punctatus
ENSPMAG00000004744	zgc:162396	92	39.352	ENSSPAG00000005505	zgc:162396	79	39.352	Stegastes_partitus
ENSPMAG00000004744	zgc:162396	79	38.251	ENSTGUG00000015044	-	98	38.251	Taeniopygia_guttata
ENSPMAG00000004744	zgc:162396	98	40.708	ENSTGUG00000003861	-	84	40.708	Taeniopygia_guttata
ENSPMAG00000004744	zgc:162396	92	36.449	ENSTRUG00000007506	zgc:162396	79	36.449	Takifugu_rubripes
ENSPMAG00000004744	zgc:162396	99	35.169	ENSTRUG00000010648	-	84	35.169	Takifugu_rubripes
ENSPMAG00000004744	zgc:162396	89	34.762	ENSTNIG00000001485	zgc:162396	76	34.762	Tetraodon_nigroviridis
ENSPMAG00000004744	zgc:162396	97	31.696	ENSXETG00000033236	-	78	31.696	Xenopus_tropicalis
ENSPMAG00000004744	zgc:162396	84	39.000	ENSXCOG00000014529	zgc:162396	72	39.000	Xiphophorus_couchianus
ENSPMAG00000004744	zgc:162396	93	37.273	ENSXMAG00000023129	zgc:162396	79	37.273	Xiphophorus_maculatus