EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004786 (Gene tree)
Gene ID: -
Gene Symbol: srl
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 4196 bases
Position: chrGL479298:728-4923
Accession: ZDB-GENE-061110-91
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005243	MMR_HSR1	PF01926.23	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005262	-	1314	-	ENSPMAP00000005243	437 (aa)	-	S4RJ61

Gene Model

Click here to download ENSPMAG00000004786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004786's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004786	srl	99	67.202	ENSG00000185739	SRL	97	67.431	Homo_sapiens
ENSPMAG00000004786	srl	99	65.207	ENSAPOG00000012432	SRL	93	65.207	Acanthochromis_polyacanthus
ENSPMAG00000004786	srl	99	68.349	ENSAPOG00000018093	srl	95	68.349	Acanthochromis_polyacanthus
ENSPMAG00000004786	srl	99	68.349	ENSACIG00000015799	srl	93	68.349	Amphilophus_citrinellus
ENSPMAG00000004786	srl	99	64.977	ENSACIG00000015419	SRL	93	64.977	Amphilophus_citrinellus
ENSPMAG00000004786	srl	99	68.578	ENSAOCG00000007574	srl	97	68.578	Amphiprion_ocellaris
ENSPMAG00000004786	srl	99	66.129	ENSAOCG00000017049	SRL	91	66.129	Amphiprion_ocellaris
ENSPMAG00000004786	srl	86	67.639	ENSAPEG00000006533	SRL	91	62.903	Amphiprion_percula
ENSPMAG00000004786	srl	99	69.108	ENSAPEG00000006911	srl	89	69.108	Amphiprion_percula
ENSPMAG00000004786	srl	99	64.786	ENSATEG00000009643	SRL	50	64.786	Anabas_testudineus
ENSPMAG00000004786	srl	99	68.879	ENSATEG00000024315	srl	89	68.879	Anabas_testudineus
ENSPMAG00000004786	srl	99	69.108	ENSACAG00000016380	SRL	79	69.108	Anolis_carolinensis
ENSPMAG00000004786	srl	99	63.657	ENSACLG00000024674	SRL	54	67.574	Astatotilapia_calliptera
ENSPMAG00000004786	srl	99	68.650	ENSACLG00000027685	srl	92	68.119	Astatotilapia_calliptera
ENSPMAG00000004786	srl	93	65.848	ENSAMXG00000038693	SRL	95	62.812	Astyanax_mexicanus
ENSPMAG00000004786	srl	99	68.276	ENSAMXG00000018789	srl	82	68.276	Astyanax_mexicanus
ENSPMAG00000004786	srl	100	67.506	ENSBTAG00000001078	SRL	53	68.421	Bos_taurus
ENSPMAG00000004786	srl	99	67.890	ENSCJAG00000019750	SRL	89	68.119	Callithrix_jacchus
ENSPMAG00000004786	srl	99	67.431	ENSCAFG00000019233	SRL	78	67.661	Canis_familiaris
ENSPMAG00000004786	srl	99	66.514	ENSCAFG00020025024	SRL	51	68.129	Canis_lupus_dingo
ENSPMAG00000004786	srl	100	67.506	ENSCHIG00000017927	SRL	53	68.421	Capra_hircus
ENSPMAG00000004786	srl	99	67.512	ENSTSYG00000007919	SRL	97	67.742	Carlito_syrichta
ENSPMAG00000004786	srl	99	67.661	ENSCPOG00000012643	SRL	89	67.890	Cavia_porcellus
ENSPMAG00000004786	srl	89	70.332	ENSCCAG00000032646	SRL	99	71.018	Cebus_capucinus
ENSPMAG00000004786	srl	99	67.202	ENSCATG00000032227	-	89	67.431	Cercocebus_atys
ENSPMAG00000004786	srl	99	67.890	ENSCLAG00000016242	SRL	89	68.119	Chinchilla_lanigera
ENSPMAG00000004786	srl	89	69.821	ENSCHOG00000001618	SRL	52	71.100	Choloepus_hoffmanni
ENSPMAG00000004786	srl	100	68.493	ENSCPBG00000026371	SRL	89	68.493	Chrysemys_picta_bellii
ENSPMAG00000004786	srl	94	57.039	ENSCING00000005231	-	89	57.039	Ciona_intestinalis
ENSPMAG00000004786	srl	99	67.202	ENSCANG00000035872	SRL	97	67.431	Colobus_angolensis_palliatus
ENSPMAG00000004786	srl	99	67.661	ENSCGRG00001016630	Srl	89	67.890	Cricetulus_griseus_chok1gshd
ENSPMAG00000004786	srl	99	67.661	ENSCGRG00000005458	Srl	89	67.890	Cricetulus_griseus_crigri
ENSPMAG00000004786	srl	99	68.879	ENSCSEG00000016151	srl	90	68.879	Cynoglossus_semilaevis
ENSPMAG00000004786	srl	99	62.844	ENSCSEG00000011866	SRL	85	62.844	Cynoglossus_semilaevis
ENSPMAG00000004786	srl	99	63.801	ENSCVAG00000022465	SRL	57	63.801	Cyprinodon_variegatus
ENSPMAG00000004786	srl	99	67.735	ENSCVAG00000003513	srl	91	67.202	Cyprinodon_variegatus
ENSPMAG00000004786	srl	87	66.230	ENSDARG00000112959	CABZ01072309.1	99	66.230	Danio_rerio
ENSPMAG00000004786	srl	99	68.276	ENSDARG00000104587	srl	89	68.276	Danio_rerio
ENSPMAG00000004786	srl	99	66.055	ENSDNOG00000011643	SRL	50	67.202	Dasypus_novemcinctus
ENSPMAG00000004786	srl	99	68.578	ENSDORG00000014807	Srl	89	68.578	Dipodomys_ordii
ENSPMAG00000004786	srl	85	68.351	ENSEBUG00000015937	srl	95	68.351	Eptatretus_burgeri
ENSPMAG00000004786	srl	99	67.512	ENSEASG00005000942	SRL	50	68.664	Equus_asinus_asinus
ENSPMAG00000004786	srl	99	68.433	ENSECAG00000024219	SRL	88	68.664	Equus_caballus
ENSPMAG00000004786	srl	99	67.963	ENSELUG00000015616	srl	89	67.963	Esox_lucius
ENSPMAG00000004786	srl	99	67.431	ENSFCAG00000022075	SRL	89	67.661	Felis_catus
ENSPMAG00000004786	srl	99	68.807	ENSFALG00000004328	SRL	60	68.807	Ficedula_albicollis
ENSPMAG00000004786	srl	99	67.661	ENSFDAG00000006199	SRL	89	67.890	Fukomys_damarensis
ENSPMAG00000004786	srl	99	67.735	ENSFHEG00000011239	srl	91	67.202	Fundulus_heteroclitus
ENSPMAG00000004786	srl	99	62.844	ENSFHEG00000011854	SRL	93	63.303	Fundulus_heteroclitus
ENSPMAG00000004786	srl	99	67.048	ENSGMOG00000014954	srl	95	67.048	Gadus_morhua
ENSPMAG00000004786	srl	100	69.635	ENSGALG00000038884	SRL	89	68.879	Gallus_gallus
ENSPMAG00000004786	srl	99	64.679	ENSGAFG00000016984	SRL	93	64.679	Gambusia_affinis
ENSPMAG00000004786	srl	99	68.421	ENSGAFG00000000010	srl	91	67.890	Gambusia_affinis
ENSPMAG00000004786	srl	99	67.735	ENSGACG00000011332	srl	95	67.735	Gasterosteus_aculeatus
ENSPMAG00000004786	srl	99	67.202	ENSGGOG00000011312	-	89	67.431	Gorilla_gorilla
ENSPMAG00000004786	srl	99	63.431	ENSHBUG00000015710	SRL	54	64.108	Haplochromis_burtoni
ENSPMAG00000004786	srl	99	68.650	ENSHBUG00000007581	srl	92	68.119	Haplochromis_burtoni
ENSPMAG00000004786	srl	99	67.661	ENSHGLG00000015271	SRL	89	67.890	Heterocephalus_glaber_female
ENSPMAG00000004786	srl	99	67.661	ENSHGLG00100019378	SRL	89	67.890	Heterocephalus_glaber_male
ENSPMAG00000004786	srl	99	68.192	ENSHCOG00000008687	srl	93	67.661	Hippocampus_comes
ENSPMAG00000004786	srl	99	68.046	ENSIPUG00000012513	srl	90	67.512	Ictalurus_punctatus
ENSPMAG00000004786	srl	93	62.899	ENSIPUG00000011609	SRL	86	62.899	Ictalurus_punctatus
ENSPMAG00000004786	srl	99	67.661	ENSSTOG00000021151	-	89	67.890	Ictidomys_tridecemlineatus
ENSPMAG00000004786	srl	99	67.661	ENSJJAG00000016400	Srl	89	67.890	Jaculus_jaculus
ENSPMAG00000004786	srl	99	67.890	ENSKMAG00000014115	srl	93	67.890	Kryptolebias_marmoratus
ENSPMAG00000004786	srl	99	65.207	ENSKMAG00000019537	SRL	95	65.207	Kryptolebias_marmoratus
ENSPMAG00000004786	srl	99	68.421	ENSLBEG00000026643	srl	89	68.421	Labrus_bergylta
ENSPMAG00000004786	srl	99	63.825	ENSLBEG00000013811	SRL	90	64.138	Labrus_bergylta
ENSPMAG00000004786	srl	99	67.963	ENSLACG00000002825	SRL	93	67.202	Latimeria_chalumnae
ENSPMAG00000004786	srl	99	68.519	ENSLOCG00000002644	srl	90	67.890	Lepisosteus_oculatus
ENSPMAG00000004786	srl	99	67.202	ENSMFAG00000037383	SRL	97	67.431	Macaca_fascicularis
ENSPMAG00000004786	srl	99	67.202	ENSMNEG00000019236	-	89	67.431	Macaca_nemestrina
ENSPMAG00000004786	srl	90	67.939	ENSMLEG00000032156	SRL	88	68.193	Mandrillus_leucophaeus
ENSPMAG00000004786	srl	99	63.431	ENSMAMG00000013756	SRL	50	64.108	Mastacembelus_armatus
ENSPMAG00000004786	srl	99	68.578	ENSMAMG00000023322	srl	89	68.578	Mastacembelus_armatus
ENSPMAG00000004786	srl	99	63.657	ENSMZEG00005004010	SRL	54	64.334	Maylandia_zebra
ENSPMAG00000004786	srl	99	68.650	ENSMZEG00005004548	srl	92	68.119	Maylandia_zebra
ENSPMAG00000004786	srl	100	68.879	ENSMGAG00000009342	SRL	87	73.389	Meleagris_gallopavo
ENSPMAG00000004786	srl	99	67.890	ENSMICG00000032307	SRL	89	68.119	Microcebus_murinus
ENSPMAG00000004786	srl	99	67.890	ENSMOCG00000008208	Srl	89	68.119	Microtus_ochrogaster
ENSPMAG00000004786	srl	99	64.840	ENSMMOG00000021572	SRL	94	64.840	Mola_mola
ENSPMAG00000004786	srl	99	67.890	ENSMMOG00000013970	srl	93	67.890	Mola_mola
ENSPMAG00000004786	srl	99	68.578	ENSMALG00000005039	srl	93	68.578	Monopterus_albus
ENSPMAG00000004786	srl	98	64.186	ENSMALG00000000670	SRL	97	64.186	Monopterus_albus
ENSPMAG00000004786	srl	99	68.119	MGP_CAROLIEiJ_G0020400	Srl	89	68.119	Mus_caroli
ENSPMAG00000004786	srl	99	68.119	ENSMUSG00000022519	Srl	89	68.119	Mus_musculus
ENSPMAG00000004786	srl	99	68.119	MGP_SPRETEiJ_G0021294	Srl	89	68.119	Mus_spretus
ENSPMAG00000004786	srl	99	66.975	ENSMPUG00000015025	SRL	51	68.129	Mustela_putorius_furo
ENSPMAG00000004786	srl	99	67.202	ENSMLUG00000030733	SRL	53	68.349	Myotis_lucifugus
ENSPMAG00000004786	srl	99	67.890	ENSNGAG00000019741	Srl	89	68.119	Nannospalax_galili
ENSPMAG00000004786	srl	99	68.349	ENSNBRG00000023775	srl	89	68.349	Neolamprologus_brichardi
ENSPMAG00000004786	srl	99	63.946	ENSNBRG00000002422	SRL	56	64.626	Neolamprologus_brichardi
ENSPMAG00000004786	srl	90	69.466	ENSNLEG00000029051	SRL	88	69.720	Nomascus_leucogenys
ENSPMAG00000004786	srl	99	68.119	ENSODEG00000013256	SRL	89	68.349	Octodon_degus
ENSPMAG00000004786	srl	99	68.650	ENSONIG00000005192	srl	90	68.650	Oreochromis_niloticus
ENSPMAG00000004786	srl	99	67.963	ENSORLG00000008291	srl	91	70.588	Oryzias_latipes
ENSPMAG00000004786	srl	99	63.741	ENSORLG00000015064	SRL	91	63.741	Oryzias_latipes
ENSPMAG00000004786	srl	99	63.972	ENSORLG00020018173	SRL	91	63.972	Oryzias_latipes_hni
ENSPMAG00000004786	srl	99	67.963	ENSORLG00020019784	srl	79	70.588	Oryzias_latipes_hni
ENSPMAG00000004786	srl	99	64.434	ENSORLG00015019063	SRL	91	64.434	Oryzias_latipes_hsok
ENSPMAG00000004786	srl	99	67.735	ENSORLG00015009342	srl	87	67.735	Oryzias_latipes_hsok
ENSPMAG00000004786	srl	99	64.027	ENSOMEG00000005682	SRL	50	64.480	Oryzias_melastigma
ENSPMAG00000004786	srl	99	68.421	ENSOMEG00000010006	srl	93	67.890	Oryzias_melastigma
ENSPMAG00000004786	srl	99	67.431	ENSOGAG00000029266	SRL	51	68.578	Otolemur_garnettii
ENSPMAG00000004786	srl	100	67.506	ENSOARG00000003074	SRL	53	68.421	Ovis_aries
ENSPMAG00000004786	srl	99	67.202	ENSPPAG00000024919	-	97	67.431	Pan_paniscus
ENSPMAG00000004786	srl	99	67.431	ENSPPRG00000010274	SRL	97	67.661	Panthera_pardus
ENSPMAG00000004786	srl	99	67.431	ENSPTIG00000015162	SRL	97	67.661	Panthera_tigris_altaica
ENSPMAG00000004786	srl	99	67.202	ENSPTRG00000007712	SRL	97	67.431	Pan_troglodytes
ENSPMAG00000004786	srl	99	67.202	ENSPANG00000013804	SRL	90	67.431	Papio_anubis
ENSPMAG00000004786	srl	99	64.747	ENSPKIG00000024974	SRL	82	65.349	Paramormyrops_kingsleyae
ENSPMAG00000004786	srl	99	68.276	ENSPKIG00000006405	srl	89	68.276	Paramormyrops_kingsleyae
ENSPMAG00000004786	srl	99	67.661	ENSPMGG00000021081	srl	91	67.661	Periophthalmus_magnuspinnatus
ENSPMAG00000004786	srl	99	63.364	ENSPMGG00000023505	-	94	63.364	Periophthalmus_magnuspinnatus
ENSPMAG00000004786	srl	99	68.349	ENSPEMG00000015842	Srl	89	68.578	Peromyscus_maniculatus_bairdii
ENSPMAG00000004786	srl	100	68.192	ENSPCIG00000012128	SRL	92	68.192	Phascolarctos_cinereus
ENSPMAG00000004786	srl	99	68.421	ENSPFOG00000011408	srl	89	68.421	Poecilia_formosa
ENSPMAG00000004786	srl	99	64.450	ENSPLAG00000002932	SRL	93	64.450	Poecilia_latipinna
ENSPMAG00000004786	srl	99	67.890	ENSPLAG00000008017	srl	91	67.890	Poecilia_latipinna
ENSPMAG00000004786	srl	99	63.146	ENSPMEG00000005890	SRL	57	63.820	Poecilia_mexicana
ENSPMAG00000004786	srl	99	67.890	ENSPMEG00000006745	srl	91	67.890	Poecilia_mexicana
ENSPMAG00000004786	srl	99	68.421	ENSPREG00000007751	srl	93	67.890	Poecilia_reticulata
ENSPMAG00000004786	srl	99	64.679	ENSPREG00000000315	SRL	93	64.679	Poecilia_reticulata
ENSPMAG00000004786	srl	99	67.512	ENSPPYG00000007053	SRL	97	67.742	Pongo_abelii
ENSPMAG00000004786	srl	99	67.890	ENSPCOG00000023135	SRL	97	68.119	Propithecus_coquereli
ENSPMAG00000004786	srl	99	66.975	ENSPVAG00000006586	SRL	51	68.129	Pteropus_vampyrus
ENSPMAG00000004786	srl	99	63.657	ENSPNYG00000003423	SRL	54	64.334	Pundamilia_nyererei
ENSPMAG00000004786	srl	99	68.650	ENSPNYG00000001200	srl	92	68.119	Pundamilia_nyererei
ENSPMAG00000004786	srl	99	63.134	ENSPNAG00000007361	-	86	63.134	Pygocentrus_nattereri
ENSPMAG00000004786	srl	99	67.356	ENSPNAG00000023106	srl	89	67.356	Pygocentrus_nattereri
ENSPMAG00000004786	srl	99	67.890	ENSSBOG00000029273	SRL	89	68.119	Saimiri_boliviensis_boliviensis
ENSPMAG00000004786	srl	99	68.276	ENSSFOG00015009773	srl	89	68.276	Scleropages_formosus
ENSPMAG00000004786	srl	99	68.650	ENSSMAG00000016274	srl	92	67.890	Scophthalmus_maximus
ENSPMAG00000004786	srl	99	62.358	ENSSDUG00000009161	SRL	93	62.358	Seriola_dumerili
ENSPMAG00000004786	srl	99	67.661	ENSSDUG00000010808	srl	93	67.661	Seriola_dumerili
ENSPMAG00000004786	srl	99	68.192	ENSSLDG00000022024	srl	91	67.661	Seriola_lalandi_dorsalis
ENSPMAG00000004786	srl	99	62.754	ENSSLDG00000014601	SRL	95	63.205	Seriola_lalandi_dorsalis
ENSPMAG00000004786	srl	99	68.129	ENSSPUG00000016859	SRL	92	68.129	Sphenodon_punctatus
ENSPMAG00000004786	srl	99	64.977	ENSSPAG00000014254	SRL	93	64.977	Stegastes_partitus
ENSPMAG00000004786	srl	99	68.879	ENSSPAG00000019105	srl	89	68.879	Stegastes_partitus
ENSPMAG00000004786	srl	100	67.277	ENSSSCG00000007949	SRL	94	67.506	Sus_scrofa
ENSPMAG00000004786	srl	99	68.578	ENSTGUG00000003951	-	92	68.578	Taeniopygia_guttata
ENSPMAG00000004786	srl	82	73.109	ENSTGUG00000016121	-	98	73.109	Taeniopygia_guttata
ENSPMAG00000004786	srl	98	63.023	ENSTRUG00000013310	SRL	54	63.341	Takifugu_rubripes
ENSPMAG00000004786	srl	99	68.879	ENSTRUG00000006005	srl	90	68.879	Takifugu_rubripes
ENSPMAG00000004786	srl	99	67.890	ENSTNIG00000009739	srl	89	67.890	Tetraodon_nigroviridis
ENSPMAG00000004786	srl	99	66.743	ENSUAMG00000005701	SRL	52	68.129	Ursus_americanus
ENSPMAG00000004786	srl	99	66.975	ENSUMAG00000002574	SRL	51	68.129	Ursus_maritimus
ENSPMAG00000004786	srl	99	66.743	ENSXETG00000017313	srl	93	66.743	Xenopus_tropicalis
ENSPMAG00000004786	srl	99	67.431	ENSXCOG00000010424	srl	96	67.431	Xiphophorus_couchianus
ENSPMAG00000004786	srl	99	64.450	ENSXCOG00000014584	SRL	93	64.450	Xiphophorus_couchianus
ENSPMAG00000004786	srl	99	63.371	ENSXMAG00000027598	SRL	59	63.596	Xiphophorus_maculatus
ENSPMAG00000004786	srl	99	67.963	ENSXMAG00000004625	srl	86	67.963	Xiphophorus_maculatus