EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPMAG00000004841 (Gene tree)
Gene ID
-
Gene Symbol
cpsf3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Minus strand
Length
7381 bases
Position
chrGL477718:165293-172673
Accession
ZDB-GENE-030131-3275
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMAP00000005340CPSF73-100_CPF11718.84.9e-1611
ENSPMAP00000005340Beta-CaspPF10996.89e-3211
ENSPMAP00000005340Lactamase_BPF00753.271.1e-1911
ENSPMAP00000005340RMMBLPF07521.122.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMAT00000005360-1632-ENSPMAP00000005340544 (aa)-S4RJF8
Gene Model
Click here to download ENSPMAG00000004841's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004841's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMAG00000004841cpsf39990.317ENSG00000119203CPSF310094.853Homo_sapiens
ENSPMAG00000004841cpsf39789.205ENSAPOG00000012241CPSF39389.205Acanthochromis_polyacanthus
ENSPMAG00000004841cpsf39989.319ENSAPOG00000022087cpsf38287.190Acanthochromis_polyacanthus
ENSPMAG00000004841cpsf39990.317ENSAMEG00000008493CPSF37890.317Ailuropoda_melanoleuca
ENSPMAG00000004841cpsf38987.835ENSACIG00000023663CPSF37687.835Amphilophus_citrinellus
ENSPMAG00000004841cpsf38987.397ENSACIG00000009846cpsf37687.397Amphilophus_citrinellus
ENSPMAG00000004841cpsf310089.541ENSAOCG00000010077CPSF37989.541Amphiprion_ocellaris
ENSPMAG00000004841cpsf39989.134ENSAOCG00000022056cpsf38689.134Amphiprion_ocellaris
ENSPMAG00000004841cpsf39989.134ENSAPEG00000019526cpsf38189.134Amphiprion_percula
ENSPMAG00000004841cpsf310089.541ENSAPEG00000021167CPSF38089.541Amphiprion_percula
ENSPMAG00000004841cpsf39490.980ENSATEG00000014525CPSF37790.980Anabas_testudineus
ENSPMAG00000004841cpsf39988.950ENSATEG00000003959cpsf37988.950Anabas_testudineus
ENSPMAG00000004841cpsf39790.494ENSAPLG00000006941CPSF37790.494Anas_platyrhynchos
ENSPMAG00000004841cpsf39089.775ENSACAG00000001759CPSF37689.775Anolis_carolinensis
ENSPMAG00000004841cpsf39986.778ENSANAG00000031254CPSF37886.778Aotus_nancymaae
ENSPMAG00000004841cpsf39689.443ENSACLG00000014484cpsf37889.443Astatotilapia_calliptera
ENSPMAG00000004841cpsf38988.041ENSACLG00000018846CPSF37688.041Astatotilapia_calliptera
ENSPMAG00000004841cpsf310089.358ENSAMXG00000004786cpsf37891.068Astyanax_mexicanus
ENSPMAG00000004841cpsf39990.317ENSBTAG00000019735CPSF37890.317Bos_taurus
ENSPMAG00000004841cpsf39864.916WBGene00013460cpsf-37564.916Caenorhabditis_elegans
ENSPMAG00000004841cpsf39990.317ENSCJAG00000006276CPSF37890.317Callithrix_jacchus
ENSPMAG00000004841cpsf39990.317ENSCAFG00000003375CPSF37490.317Canis_familiaris
ENSPMAG00000004841cpsf39990.317ENSCAFG00020026799CPSF38690.317Canis_lupus_dingo
ENSPMAG00000004841cpsf39990.317ENSCHIG00000013973CPSF37890.317Capra_hircus
ENSPMAG00000004841cpsf39990.317ENSTSYG00000002967CPSF37890.317Carlito_syrichta
ENSPMAG00000004841cpsf39690.595ENSCAPG00000013851CPSF37890.595Cavia_aperea
ENSPMAG00000004841cpsf39990.317ENSCPOG00000011299CPSF37890.317Cavia_porcellus
ENSPMAG00000004841cpsf39990.317ENSCCAG00000036730CPSF37890.317Cebus_capucinus
ENSPMAG00000004841cpsf39990.317ENSCATG00000014770CPSF39590.103Cercocebus_atys
ENSPMAG00000004841cpsf39990.317ENSCLAG00000002727CPSF37890.317Chinchilla_lanigera
ENSPMAG00000004841cpsf39980.447ENSCSAG00000007125CPSF37680.447Chlorocebus_sabaeus
ENSPMAG00000004841cpsf382100.000ENSCHOG00000000180CPSF366100.000Choloepus_hoffmanni
ENSPMAG00000004841cpsf39990.055ENSCPBG00000014074CPSF37890.055Chrysemys_picta_bellii
ENSPMAG00000004841cpsf39876.030ENSCING00000007214-7676.030Ciona_intestinalis
ENSPMAG00000004841cpsf39982.309ENSCANG00000034435CPSF37982.309Colobus_angolensis_palliatus
ENSPMAG00000004841cpsf39989.944ENSCGRG00001013134Cpsf37889.944Cricetulus_griseus_chok1gshd
ENSPMAG00000004841cpsf39989.944ENSCGRG00000018319Cpsf37889.944Cricetulus_griseus_crigri
ENSPMAG00000004841cpsf310088.624ENSCSEG00000002021CPSF37988.624Cynoglossus_semilaevis
ENSPMAG00000004841cpsf310089.725ENSCVAG00000015067CPSF37989.725Cyprinodon_variegatus
ENSPMAG00000004841cpsf310089.541ENSDARG00000027649cpsf37989.541Danio_rerio
ENSPMAG00000004841cpsf39989.033ENSDNOG00000008940CPSF37589.033Dasypus_novemcinctus
ENSPMAG00000004841cpsf39990.317ENSDORG00000014263Cpsf38290.317Dipodomys_ordii
ENSPMAG00000004841cpsf39775.379FBgn0261065Cpsf737874.766Drosophila_melanogaster
ENSPMAG00000004841cpsf39975.605ENSETEG00000003893CPSF38275.605Echinops_telfairi
ENSPMAG00000004841cpsf310088.787ENSEBUG00000009018cpsf37688.787Eptatretus_burgeri
ENSPMAG00000004841cpsf39990.317ENSEASG00005003970CPSF37890.317Equus_asinus_asinus
ENSPMAG00000004841cpsf39990.317ENSECAG00000019911CPSF38790.317Equus_caballus
ENSPMAG00000004841cpsf39972.439ENSEEUG00000015422CPSF37872.439Erinaceus_europaeus
ENSPMAG00000004841cpsf39989.319ENSELUG00000013775cpsf37889.319Esox_lucius
ENSPMAG00000004841cpsf39990.317ENSFCAG00000007852CPSF37890.317Felis_catus
ENSPMAG00000004841cpsf39290.619ENSFALG00000006572CPSF37790.619Ficedula_albicollis
ENSPMAG00000004841cpsf39990.317ENSFDAG00000006317CPSF37890.317Fukomys_damarensis
ENSPMAG00000004841cpsf39988.766ENSFHEG00000014774cpsf38288.766Fundulus_heteroclitus
ENSPMAG00000004841cpsf39988.582ENSGMOG00000003157cpsf37888.582Gadus_morhua
ENSPMAG00000004841cpsf310090.257ENSGALG00000016424CPSF37890.257Gallus_gallus
ENSPMAG00000004841cpsf310089.908ENSGAFG00000008016CPSF37989.908Gambusia_affinis
ENSPMAG00000004841cpsf38986.570ENSGAFG00000019449cpsf37686.570Gambusia_affinis
ENSPMAG00000004841cpsf35987.926ENSGAGG00000025583CPSF36487.926Gopherus_agassizii
ENSPMAG00000004841cpsf39987.500ENSGGOG00000001757CPSF39192.979Gorilla_gorilla
ENSPMAG00000004841cpsf39989.319ENSHBUG00000001188cpsf37989.319Haplochromis_burtoni
ENSPMAG00000004841cpsf39990.503ENSHGLG00000000666CPSF37790.503Heterocephalus_glaber_female
ENSPMAG00000004841cpsf39990.503ENSHGLG00100007765CPSF37790.503Heterocephalus_glaber_male
ENSPMAG00000004841cpsf310087.706ENSHCOG00000007251cpsf37987.706Hippocampus_comes
ENSPMAG00000004841cpsf310088.807ENSHCOG00000015957CPSF37888.807Hippocampus_comes
ENSPMAG00000004841cpsf310088.440ENSIPUG00000023488cpsf37988.440Ictalurus_punctatus
ENSPMAG00000004841cpsf39990.317ENSSTOG00000004476CPSF37890.317Ictidomys_tridecemlineatus
ENSPMAG00000004841cpsf39990.317ENSJJAG00000023415Cpsf37890.317Jaculus_jaculus
ENSPMAG00000004841cpsf310089.725ENSKMAG00000007317CPSF37989.725Kryptolebias_marmoratus
ENSPMAG00000004841cpsf39988.398ENSKMAG00000002806cpsf37988.398Kryptolebias_marmoratus
ENSPMAG00000004841cpsf39989.134ENSLBEG00000013492CPSF38289.134Labrus_bergylta
ENSPMAG00000004841cpsf310084.771ENSLBEG00000020569cpsf37984.771Labrus_bergylta
ENSPMAG00000004841cpsf39983.919ENSLACG00000008308CPSF37883.919Latimeria_chalumnae
ENSPMAG00000004841cpsf39989.871ENSLOCG00000016823cpsf37889.871Lepisosteus_oculatus
ENSPMAG00000004841cpsf39889.326ENSLAFG00000009467CPSF37889.326Loxodonta_africana
ENSPMAG00000004841cpsf39990.317ENSMFAG00000001339CPSF39590.103Macaca_fascicularis
ENSPMAG00000004841cpsf39990.317ENSMMUG00000018038CPSF39290.103Macaca_mulatta
ENSPMAG00000004841cpsf38794.048ENSMNEG00000039447CPSF37694.048Macaca_nemestrina
ENSPMAG00000004841cpsf39990.317ENSMLEG00000026825CPSF39292.964Mandrillus_leucophaeus
ENSPMAG00000004841cpsf39988.950ENSMAMG00000003076cpsf38287.397Mastacembelus_armatus
ENSPMAG00000004841cpsf38987.423ENSMAMG00000008835CPSF37687.423Mastacembelus_armatus
ENSPMAG00000004841cpsf310089.541ENSMZEG00005006258CPSF37989.541Maylandia_zebra
ENSPMAG00000004841cpsf39989.319ENSMZEG00005014358cpsf37989.319Maylandia_zebra
ENSPMAG00000004841cpsf39690.787ENSMGAG00000013995CPSF37890.787Meleagris_gallopavo
ENSPMAG00000004841cpsf39987.523ENSMICG00000002363CPSF38087.523Microcebus_murinus
ENSPMAG00000004841cpsf39989.944ENSMOCG00000020067Cpsf38289.944Microtus_ochrogaster
ENSPMAG00000004841cpsf39288.024ENSMMOG00000018212CPSF37988.024Mola_mola
ENSPMAG00000004841cpsf310053.102ENSMMOG00000011923CPSF39043.750Mola_mola
ENSPMAG00000004841cpsf39990.317ENSMODG00000014703CPSF37790.317Monodelphis_domestica
ENSPMAG00000004841cpsf39087.045ENSMALG00000011474CPSF38087.045Monopterus_albus
ENSPMAG00000004841cpsf39989.687ENSMALG00000016416cpsf37989.687Monopterus_albus
ENSPMAG00000004841cpsf39989.944MGP_CAROLIEiJ_G0017640Cpsf37889.944Mus_caroli
ENSPMAG00000004841cpsf39989.944ENSMUSG00000054309Cpsf39694.915Mus_musculus
ENSPMAG00000004841cpsf39989.944MGP_PahariEiJ_G0029397Cpsf37889.944Mus_pahari
ENSPMAG00000004841cpsf39989.944MGP_SPRETEiJ_G0018481Cpsf37889.944Mus_spretus
ENSPMAG00000004841cpsf39990.317ENSMPUG00000013213CPSF37890.317Mustela_putorius_furo
ENSPMAG00000004841cpsf39990.317ENSMLUG00000010636CPSF37890.317Myotis_lucifugus
ENSPMAG00000004841cpsf39989.944ENSNGAG00000019836Cpsf37889.944Nannospalax_galili
ENSPMAG00000004841cpsf39989.503ENSNBRG00000004770cpsf37989.503Neolamprologus_brichardi
ENSPMAG00000004841cpsf38988.041ENSNBRG00000010525CPSF37688.041Neolamprologus_brichardi
ENSPMAG00000004841cpsf39990.317ENSNLEG00000013359CPSF39192.979Nomascus_leucogenys
ENSPMAG00000004841cpsf38767.265ENSMEUG00000013117-6967.265Notamacropus_eugenii
ENSPMAG00000004841cpsf38793.651ENSOPRG00000008902CPSF36993.651Ochotona_princeps
ENSPMAG00000004841cpsf39990.317ENSODEG00000003129CPSF37890.317Octodon_degus
ENSPMAG00000004841cpsf39989.134ENSONIG00000018812cpsf37989.134Oreochromis_niloticus
ENSPMAG00000004841cpsf37788.756ENSOANG00000008577CPSF37488.756Ornithorhynchus_anatinus
ENSPMAG00000004841cpsf39990.317ENSOCUG00000003728CPSF37890.317Oryctolagus_cuniculus
ENSPMAG00000004841cpsf310087.890ENSORLG00000018854cpsf37987.890Oryzias_latipes
ENSPMAG00000004841cpsf310087.890ENSORLG00020013331cpsf37987.890Oryzias_latipes_hni
ENSPMAG00000004841cpsf310087.890ENSORLG00015011017cpsf37987.890Oryzias_latipes_hsok
ENSPMAG00000004841cpsf310088.073ENSOMEG00000010647cpsf37688.073Oryzias_melastigma
ENSPMAG00000004841cpsf39978.399ENSOGAG00000001680CPSF37878.399Otolemur_garnettii
ENSPMAG00000004841cpsf39990.317ENSOARG00000015073CPSF37890.317Ovis_aries
ENSPMAG00000004841cpsf39990.317ENSPPAG00000042457CPSF39192.979Pan_paniscus
ENSPMAG00000004841cpsf39990.317ENSPPRG00000016790CPSF37890.317Panthera_pardus
ENSPMAG00000004841cpsf39890.824ENSPTIG00000003920CPSF37890.824Panthera_tigris_altaica
ENSPMAG00000004841cpsf39990.317ENSPTRG00000011638CPSF39192.979Pan_troglodytes
ENSPMAG00000004841cpsf39990.317ENSPANG00000016798CPSF39590.103Papio_anubis
ENSPMAG00000004841cpsf310090.459ENSPKIG00000023646cpsf37990.459Paramormyrops_kingsleyae
ENSPMAG00000004841cpsf39889.179ENSPSIG00000016144CPSF37889.179Pelodiscus_sinensis
ENSPMAG00000004841cpsf38987.190ENSPMGG00000006141-8387.190Periophthalmus_magnuspinnatus
ENSPMAG00000004841cpsf39990.130ENSPEMG00000017668Cpsf37890.130Peromyscus_maniculatus_bairdii
ENSPMAG00000004841cpsf39690.595ENSPCIG00000009823CPSF37890.595Phascolarctos_cinereus
ENSPMAG00000004841cpsf39988.950ENSPFOG00000015922cpsf37988.950Poecilia_formosa
ENSPMAG00000004841cpsf310089.541ENSPFOG00000010418-7989.541Poecilia_formosa
ENSPMAG00000004841cpsf39988.950ENSPLAG00000000882cpsf37988.950Poecilia_latipinna
ENSPMAG00000004841cpsf39988.950ENSPMEG00000018309cpsf37988.950Poecilia_mexicana
ENSPMAG00000004841cpsf38986.570ENSPREG00000014875cpsf37786.570Poecilia_reticulata
ENSPMAG00000004841cpsf310089.908ENSPREG00000004482CPSF38389.908Poecilia_reticulata
ENSPMAG00000004841cpsf39985.102ENSPPYG00000012666CPSF37785.102Pongo_abelii
ENSPMAG00000004841cpsf39962.313ENSPCAG00000015042CPSF38262.313Procavia_capensis
ENSPMAG00000004841cpsf39968.824ENSPCOG00000023016CPSF37768.824Propithecus_coquereli
ENSPMAG00000004841cpsf39990.317ENSPVAG00000005324CPSF37890.317Pteropus_vampyrus
ENSPMAG00000004841cpsf38988.041ENSPNYG00000021047CPSF38088.041Pundamilia_nyererei
ENSPMAG00000004841cpsf39989.319ENSPNYG00000004405cpsf37989.319Pundamilia_nyererei
ENSPMAG00000004841cpsf310089.908ENSPNAG00000023060cpsf37989.908Pygocentrus_nattereri
ENSPMAG00000004841cpsf39989.944ENSRNOG00000052418Cpsf37889.944Rattus_norvegicus
ENSPMAG00000004841cpsf39983.985ENSRBIG00000041615CPSF37685.629Rhinopithecus_bieti
ENSPMAG00000004841cpsf39990.317ENSRROG00000033792CPSF37890.317Rhinopithecus_roxellana
ENSPMAG00000004841cpsf38452.754YLR277CYSH16052.754Saccharomyces_cerevisiae
ENSPMAG00000004841cpsf39686.180ENSSBOG00000027263CPSF37586.180Saimiri_boliviensis_boliviensis
ENSPMAG00000004841cpsf39990.317ENSSHAG00000007024CPSF37890.317Sarcophilus_harrisii
ENSPMAG00000004841cpsf310089.908ENSSFOG00015002108cpsf37989.908Scleropages_formosus
ENSPMAG00000004841cpsf310089.174ENSSMAG00000020534CPSF38189.174Scophthalmus_maximus
ENSPMAG00000004841cpsf310089.358ENSSDUG00000018498CPSF37989.358Seriola_dumerili
ENSPMAG00000004841cpsf39988.398ENSSDUG00000002828cpsf37788.398Seriola_dumerili
ENSPMAG00000004841cpsf310089.358ENSSLDG00000005234CPSF37989.358Seriola_lalandi_dorsalis
ENSPMAG00000004841cpsf39988.214ENSSLDG00000008469cpsf38488.214Seriola_lalandi_dorsalis
ENSPMAG00000004841cpsf39979.851ENSSARG00000005186CPSF37879.851Sorex_araneus
ENSPMAG00000004841cpsf39689.272ENSSPUG00000015525CPSF37689.272Sphenodon_punctatus
ENSPMAG00000004841cpsf39988.582ENSSPAG00000018579cpsf37988.582Stegastes_partitus
ENSPMAG00000004841cpsf310089.541ENSSPAG00000002906CPSF37989.541Stegastes_partitus
ENSPMAG00000004841cpsf39990.317ENSSSCG00000020799CPSF37890.317Sus_scrofa
ENSPMAG00000004841cpsf39990.706ENSTGUG00000013016CPSF37890.706Taeniopygia_guttata
ENSPMAG00000004841cpsf39988.214ENSTRUG00000007030cpsf37888.214Takifugu_rubripes
ENSPMAG00000004841cpsf38088.556ENSTBEG00000002707CPSF36688.556Tupaia_belangeri
ENSPMAG00000004841cpsf37393.564ENSTTRG00000000861CPSF35893.564Tursiops_truncatus
ENSPMAG00000004841cpsf39990.317ENSUAMG00000007535CPSF37790.317Ursus_americanus
ENSPMAG00000004841cpsf39290.220ENSUMAG00000003676CPSF38490.220Ursus_maritimus
ENSPMAG00000004841cpsf39690.595ENSVPAG00000008041CPSF38290.595Vicugna_pacos
ENSPMAG00000004841cpsf39990.317ENSVVUG00000002194CPSF37890.317Vulpes_vulpes
ENSPMAG00000004841cpsf39990.203ENSXETG00000008263cpsf37890.203Xenopus_tropicalis
ENSPMAG00000004841cpsf39988.766ENSXCOG00000019695cpsf37988.766Xiphophorus_couchianus
ENSPMAG00000004841cpsf310089.908ENSXMAG00000027291CPSF37989.908Xiphophorus_maculatus
ENSPMAG00000004841cpsf39988.950ENSXMAG00000009784cpsf37988.950Xiphophorus_maculatus

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