EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 5067 bases
Position: chrGL476741:105636-110702
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005343	zf-C2H2	PF00096.26	1.5e-15	1	4
ENSPMAP00000005343	zf-C2H2	PF00096.26	1.5e-15	2	4
ENSPMAP00000005343	zf-C2H2	PF00096.26	1.5e-15	3	4
ENSPMAP00000005343	zf-C2H2	PF00096.26	1.5e-15	4	4
ENSPMAP00000005343	zf-met	PF12874.7	4.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005363	-	934	-	ENSPMAP00000005343	258 (aa)	-	S4RJG1

Gene Model

Click here to download ENSPMAG00000004866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004866	-	50	32.000	ENSPMAG00000004189	-	93	33.028
ENSPMAG00000004866	-	86	47.887	ENSPMAG00000007500	ZNF436	74	39.175
ENSPMAG00000004866	-	75	42.647	ENSPMAG00000001294	-	99	42.647
ENSPMAG00000004866	-	76	40.000	ENSPMAG00000000706	-	85	39.091
ENSPMAG00000004866	-	76	34.314	ENSPMAG00000006198	ZBTB47	70	33.333
ENSPMAG00000004866	-	75	32.990	ENSPMAG00000005248	prdm5	73	34.951
ENSPMAG00000004866	-	75	35.238	ENSPMAG00000000404	-	65	35.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004866	-	82	50.655	ENSG00000103495	MAZ	62	60.000	Homo_sapiens
ENSPMAG00000004866	-	82	50.655	ENSANAG00000036195	-	55	48.302	Aotus_nancymaae
ENSPMAG00000004866	-	84	50.000	ENSBTAG00000052323	MAZ	57	48.289	Bos_taurus
ENSPMAG00000004866	-	84	50.000	ENSCAFG00000016964	MAZ	61	48.289	Canis_familiaris
ENSPMAG00000004866	-	84	50.000	ENSCAFG00020017751	MAZ	57	48.289	Canis_lupus_dingo
ENSPMAG00000004866	-	84	50.000	ENSCHIG00000020711	MAZ	54	48.289	Capra_hircus
ENSPMAG00000004866	-	82	50.655	ENSCCAG00000037524	MAZ	57	48.289	Cebus_capucinus
ENSPMAG00000004866	-	82	50.655	ENSCATG00000033033	MAZ	54	48.289	Cercocebus_atys
ENSPMAG00000004866	-	82	49.782	ENSCGRG00001008879	Maz	57	47.909	Cricetulus_griseus_chok1gshd
ENSPMAG00000004866	-	99	39.867	ENSDARG00000063555	si:ch211-166g5.4	53	44.444	Danio_rerio
ENSPMAG00000004866	-	82	50.218	ENSEASG00005013172	MAZ	56	47.529	Equus_asinus_asinus
ENSPMAG00000004866	-	82	50.218	ENSECAG00000024341	MAZ	57	47.529	Equus_caballus
ENSPMAG00000004866	-	84	50.000	ENSFCAG00000014146	MAZ	55	48.289	Felis_catus
ENSPMAG00000004866	-	98	40.411	ENSGACG00000014840	maza	80	38.947	Gasterosteus_aculeatus
ENSPMAG00000004866	-	78	60.000	ENSJJAG00000020922	-	50	60.000	Jaculus_jaculus
ENSPMAG00000004866	-	84	43.825	ENSLACG00000010161	MAZ	59	43.515	Latimeria_chalumnae
ENSPMAG00000004866	-	82	50.655	ENSMMUG00000019826	MAZ	65	47.909	Macaca_mulatta
ENSPMAG00000004866	-	78	60.000	ENSMNEG00000037329	MAZ	61	48.289	Macaca_nemestrina
ENSPMAG00000004866	-	82	49.345	ENSMAUG00000011903	Maz	56	47.529	Mesocricetus_auratus
ENSPMAG00000004866	-	82	50.655	ENSMICG00000030392	MAZ	50	50.655	Microcebus_murinus
ENSPMAG00000004866	-	82	49.782	ENSMOCG00000003611	Maz	50	49.782	Microtus_ochrogaster
ENSPMAG00000004866	-	82	49.782	ENSMUSG00000030678	Maz	57	47.909	Mus_musculus
ENSPMAG00000004866	-	82	50.218	MGP_PahariEiJ_G0013693	Maz	58	48.289	Mus_pahari
ENSPMAG00000004866	-	85	46.414	ENSOARG00000005520	MAZ	68	47.598	Ovis_aries
ENSPMAG00000004866	-	84	50.000	ENSPPRG00000016750	-	57	48.289	Panthera_pardus
ENSPMAG00000004866	-	82	50.655	ENSPTRG00000007968	MAZ	59	47.761	Pan_troglodytes
ENSPMAG00000004866	-	82	51.092	ENSPCOG00000022370	MAZ	57	48.669	Propithecus_coquereli
ENSPMAG00000004866	-	79	49.774	ENSSPUG00000010618	MAZ	51	49.774	Sphenodon_punctatus
ENSPMAG00000004866	-	82	50.655	ENSSSCG00000025321	MAZ	55	48.289	Sus_scrofa
ENSPMAG00000004866	-	79	51.364	ENSTTRG00000005420	MAZ	55	51.835	Tursiops_truncatus