EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004905 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 7025 bases
Position: chrGL476588:421313-428337
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005405	Caprin-1_C	PF12287.8	2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005425	-	1032	-	ENSPMAP00000005405	344 (aa)	-	S4RJM2

Gene Model

Click here to download ENSPMAG00000004905's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004905's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004905	-	100	48.986	ENSG00000135387	CAPRIN1	62	54.701	Homo_sapiens
ENSPMAG00000004905	-	97	43.885	ENSG00000110888	CAPRIN2	100	48.235	Homo_sapiens
ENSPMAG00000004905	-	100	44.857	ENSAPOG00000010508	caprin1b	50	44.101	Acanthochromis_polyacanthus
ENSPMAG00000004905	-	100	45.690	ENSAPOG00000004726	caprin1a	54	44.380	Acanthochromis_polyacanthus
ENSPMAG00000004905	-	100	45.480	ENSACIG00000017913	caprin1b	50	45.272	Amphilophus_citrinellus
ENSPMAG00000004905	-	99	44.220	ENSACIG00000005383	caprin1a	53	41.972	Amphilophus_citrinellus
ENSPMAG00000004905	-	100	45.115	ENSAOCG00000003017	caprin1a	54	44.957	Amphiprion_ocellaris
ENSPMAG00000004905	-	100	43.407	ENSAOCG00000004574	caprin1b	51	45.455	Amphiprion_ocellaris
ENSPMAG00000004905	-	100	43.407	ENSAPEG00000001227	caprin1b	51	45.455	Amphiprion_percula
ENSPMAG00000004905	-	100	45.115	ENSAPEG00000008548	caprin1a	54	44.957	Amphiprion_percula
ENSPMAG00000004905	-	100	45.245	ENSATEG00000015675	caprin1b	50	45.402	Anabas_testudineus
ENSPMAG00000004905	-	100	45.690	ENSATEG00000007707	caprin1a	53	45.272	Anabas_testudineus
ENSPMAG00000004905	-	99	50.291	ENSAPLG00000006975	CAPRIN1	52	50.291	Anas_platyrhynchos
ENSPMAG00000004905	-	100	49.275	ENSANAG00000032811	-	51	48.538	Aotus_nancymaae
ENSPMAG00000004905	-	100	45.087	ENSACLG00000026749	caprin1a	53	44.193	Astatotilapia_calliptera
ENSPMAG00000004905	-	100	45.040	ENSACLG00000007463	caprin1b	51	45.308	Astatotilapia_calliptera
ENSPMAG00000004905	-	99	42.593	ENSAMXG00000006601	caprin1a	55	45.430	Astyanax_mexicanus
ENSPMAG00000004905	-	100	48.986	ENSCAFG00020004525	CAPRIN1	51	48.159	Canis_lupus_dingo
ENSPMAG00000004905	-	97	49.401	ENSTSYG00000033857	-	51	48.802	Carlito_syrichta
ENSPMAG00000004905	-	99	47.550	ENSCAPG00000000035	CAPRIN1	55	47.606	Cavia_aperea
ENSPMAG00000004905	-	100	49.275	ENSCCAG00000020172	-	51	48.538	Cebus_capucinus
ENSPMAG00000004905	-	100	44.699	ENSCCAG00000022482	-	50	44.571	Cebus_capucinus
ENSPMAG00000004905	-	100	48.986	ENSCSAG00000005378	CAPRIN1	53	49.008	Chlorocebus_sabaeus
ENSPMAG00000004905	-	100	48.986	ENSCANG00000032583	CAPRIN1	51	49.123	Colobus_angolensis_palliatus
ENSPMAG00000004905	-	100	49.855	ENSCGRG00000012551	Caprin1	50	49.008	Cricetulus_griseus_crigri
ENSPMAG00000004905	-	100	45.272	ENSCSEG00000001898	caprin1a	53	44.507	Cynoglossus_semilaevis
ENSPMAG00000004905	-	100	45.480	ENSCSEG00000013073	caprin1b	51	45.198	Cynoglossus_semilaevis
ENSPMAG00000004905	-	100	44.624	ENSCVAG00000021994	caprin1b	52	46.779	Cyprinodon_variegatus
ENSPMAG00000004905	-	100	43.182	ENSCVAG00000005129	caprin1a	54	42.265	Cyprinodon_variegatus
ENSPMAG00000004905	-	99	45.584	ENSDARG00000009346	caprin1a	52	44.828	Danio_rerio
ENSPMAG00000004905	-	97	49.102	ENSDNOG00000037711	-	51	48.246	Dasypus_novemcinctus
ENSPMAG00000004905	-	99	48.980	ENSETEG00000009308	CAPRIN1	52	49.003	Echinops_telfairi
ENSPMAG00000004905	-	100	46.237	ENSEBUG00000005422	CAPRIN1	52	45.699	Eptatretus_burgeri
ENSPMAG00000004905	-	100	47.536	ENSEASG00005020196	CAPRIN1	52	47.009	Equus_asinus_asinus
ENSPMAG00000004905	-	100	47.536	ENSECAG00000007147	CAPRIN1	52	47.009	Equus_caballus
ENSPMAG00000004905	-	99	49.419	ENSEEUG00000006638	CAPRIN1	52	46.927	Erinaceus_europaeus
ENSPMAG00000004905	-	100	45.609	ENSELUG00000009443	caprin1a	51	44.886	Esox_lucius
ENSPMAG00000004905	-	99	47.443	ENSELUG00000006003	caprin1b	50	46.307	Esox_lucius
ENSPMAG00000004905	-	97	48.802	ENSFCAG00000030411	CAPRIN1	51	47.953	Felis_catus
ENSPMAG00000004905	-	100	44.809	ENSFHEG00000009076	caprin1b	55	46.089	Fundulus_heteroclitus
ENSPMAG00000004905	-	100	45.115	ENSFHEG00000020227	caprin1a	53	43.678	Fundulus_heteroclitus
ENSPMAG00000004905	-	99	43.305	ENSGMOG00000008955	caprin1a	53	42.693	Gadus_morhua
ENSPMAG00000004905	-	100	45.634	ENSGMOG00000002853	caprin1b	50	44.068	Gadus_morhua
ENSPMAG00000004905	-	100	44.318	ENSGAFG00000013909	caprin1a	53	43.391	Gambusia_affinis
ENSPMAG00000004905	-	99	42.165	ENSGACG00000015620	caprin1a	52	39.835	Gasterosteus_aculeatus
ENSPMAG00000004905	-	100	40.390	ENSGACG00000009867	caprin1b	51	42.416	Gasterosteus_aculeatus
ENSPMAG00000004905	-	100	45.087	ENSHBUG00000013605	caprin1a	53	43.944	Haplochromis_burtoni
ENSPMAG00000004905	-	100	45.507	ENSHBUG00000003821	caprin1b	52	44.947	Haplochromis_burtoni
ENSPMAG00000004905	-	99	45.906	ENSHGLG00000016118	-	50	44.444	Heterocephalus_glaber_female
ENSPMAG00000004905	-	100	42.363	ENSHCOG00000008874	caprin1a	54	42.241	Hippocampus_comes
ENSPMAG00000004905	-	100	42.547	ENSHCOG00000016760	caprin1b	52	42.234	Hippocampus_comes
ENSPMAG00000004905	-	99	43.048	ENSIPUG00000004594	caprin1	52	43.968	Ictalurus_punctatus
ENSPMAG00000004905	-	100	45.098	ENSKMAG00000001524	caprin1b	55	45.198	Kryptolebias_marmoratus
ENSPMAG00000004905	-	100	43.020	ENSKMAG00000003580	caprin1a	54	41.274	Kryptolebias_marmoratus
ENSPMAG00000004905	-	100	44.044	ENSLBEG00000013179	caprin1b	54	44.199	Labrus_bergylta
ENSPMAG00000004905	-	100	45.977	ENSLBEG00000000710	caprin1a	53	44.413	Labrus_bergylta
ENSPMAG00000004905	-	100	48.986	ENSMFAG00000038273	CAPRIN1	51	49.123	Macaca_fascicularis
ENSPMAG00000004905	-	100	48.986	ENSMMUG00000021643	CAPRIN1	54	49.008	Macaca_mulatta
ENSPMAG00000004905	-	100	48.986	ENSMNEG00000030485	CAPRIN1	51	49.123	Macaca_nemestrina
ENSPMAG00000004905	-	100	48.986	ENSMLEG00000043851	CAPRIN1	51	49.123	Mandrillus_leucophaeus
ENSPMAG00000004905	-	100	43.804	ENSMAMG00000021922	caprin1a	53	41.341	Mastacembelus_armatus
ENSPMAG00000004905	-	88	53.476	ENSMAMG00000000304	caprin1b	53	41.425	Mastacembelus_armatus
ENSPMAG00000004905	-	100	45.040	ENSMZEG00005005204	caprin1b	51	45.308	Maylandia_zebra
ENSPMAG00000004905	-	100	45.087	ENSMZEG00005000729	caprin1a	53	44.193	Maylandia_zebra
ENSPMAG00000004905	-	100	47.025	ENSMGAG00000010122	CAPRIN1	53	47.025	Meleagris_gallopavo
ENSPMAG00000004905	-	100	48.406	ENSMICG00000003617	CAPRIN1	51	48.503	Microcebus_murinus
ENSPMAG00000004905	-	100	43.516	ENSMMOG00000017259	caprin1a	55	42.816	Mola_mola
ENSPMAG00000004905	-	100	44.540	ENSMMOG00000012262	caprin1b	52	44.034	Mola_mola
ENSPMAG00000004905	-	99	46.110	ENSMALG00000019178	caprin1a	50	44.729	Monopterus_albus
ENSPMAG00000004905	-	100	45.845	ENSMALG00000008939	caprin1b	51	44.986	Monopterus_albus
ENSPMAG00000004905	-	100	48.986	MGP_CAROLIEiJ_G0024019	Caprin1	84	45.690	Mus_caroli
ENSPMAG00000004905	-	100	48.986	ENSMUSG00000027184	Caprin1	83	45.690	Mus_musculus
ENSPMAG00000004905	-	100	48.986	MGP_PahariEiJ_G0025455	Caprin1	84	45.690	Mus_pahari
ENSPMAG00000004905	-	100	48.986	MGP_SPRETEiJ_G0024929	Caprin1	84	45.690	Mus_spretus
ENSPMAG00000004905	-	99	48.703	ENSMLUG00000016467	CAPRIN1	52	48.991	Myotis_lucifugus
ENSPMAG00000004905	-	100	45.087	ENSNBRG00000013368	caprin1a	53	45.087	Neolamprologus_brichardi
ENSPMAG00000004905	-	100	43.850	ENSNBRG00000002234	caprin1b	51	44.800	Neolamprologus_brichardi
ENSPMAG00000004905	-	100	48.986	ENSNLEG00000017913	CAPRIN1	51	49.123	Nomascus_leucogenys
ENSPMAG00000004905	-	100	45.376	ENSONIG00000006172	caprin1a	52	44.509	Oreochromis_niloticus
ENSPMAG00000004905	-	100	44.385	ENSONIG00000008449	caprin1b	51	46.389	Oreochromis_niloticus
ENSPMAG00000004905	-	100	43.391	ENSORLG00000006617	caprin1a	53	42.500	Oryzias_latipes
ENSPMAG00000004905	-	100	46.049	ENSORLG00000004783	caprin1b	54	46.537	Oryzias_latipes
ENSPMAG00000004905	-	100	46.537	ENSORLG00020012514	caprin1b	51	46.537	Oryzias_latipes_hni
ENSPMAG00000004905	-	100	43.429	ENSORLG00020012410	caprin1a	53	42.222	Oryzias_latipes_hni
ENSPMAG00000004905	-	100	46.467	ENSORLG00015005783	caprin1b	52	46.961	Oryzias_latipes_hsok
ENSPMAG00000004905	-	100	43.103	ENSORLG00015010780	caprin1a	53	42.222	Oryzias_latipes_hsok
ENSPMAG00000004905	-	100	45.330	ENSOMEG00000013708	caprin1b	52	46.133	Oryzias_melastigma
ENSPMAG00000004905	-	100	43.391	ENSOMEG00000020990	caprin1a	51	42.500	Oryzias_melastigma
ENSPMAG00000004905	-	97	48.204	ENSPPRG00000015436	CAPRIN1	51	48.246	Panthera_pardus
ENSPMAG00000004905	-	99	48.397	ENSPTIG00000009952	CAPRIN1	51	48.246	Panthera_tigris_altaica
ENSPMAG00000004905	-	100	48.986	ENSPTRG00000003493	CAPRIN1	51	49.123	Pan_troglodytes
ENSPMAG00000004905	-	99	47.262	ENSPKIG00000003997	CAPRIN1	50	46.087	Paramormyrops_kingsleyae
ENSPMAG00000004905	-	100	47.143	ENSPKIG00000015169	-	50	46.939	Paramormyrops_kingsleyae
ENSPMAG00000004905	-	98	43.953	ENSPMGG00000007228	caprin1b	52	44.248	Periophthalmus_magnuspinnatus
ENSPMAG00000004905	-	100	44.380	ENSPMGG00000004813	caprin1a	50	44.669	Periophthalmus_magnuspinnatus
ENSPMAG00000004905	-	100	43.266	ENSPFOG00000005152	caprin1a	50	41.783	Poecilia_formosa
ENSPMAG00000004905	-	100	46.499	ENSPFOG00000022517	caprin1b	51	47.191	Poecilia_formosa
ENSPMAG00000004905	-	100	44.318	ENSPLAG00000010511	caprin1a	53	43.466	Poecilia_latipinna
ENSPMAG00000004905	-	100	43.935	ENSPLAG00000014342	caprin1b	55	46.779	Poecilia_latipinna
ENSPMAG00000004905	-	100	46.779	ENSPMEG00000003153	caprin1b	55	47.324	Poecilia_mexicana
ENSPMAG00000004905	-	100	44.318	ENSPMEG00000015178	caprin1a	53	43.466	Poecilia_mexicana
ENSPMAG00000004905	-	100	42.980	ENSPREG00000022985	caprin1a	53	41.504	Poecilia_reticulata
ENSPMAG00000004905	-	100	47.354	ENSPREG00000016169	caprin1b	55	47.619	Poecilia_reticulata
ENSPMAG00000004905	-	99	46.939	ENSPCAG00000008020	CAPRIN1	52	46.064	Procavia_capensis
ENSPMAG00000004905	-	100	49.275	ENSPCOG00000021422	CAPRIN1	51	48.503	Propithecus_coquereli
ENSPMAG00000004905	-	100	44.800	ENSPNYG00000021933	caprin1b	51	45.067	Pundamilia_nyererei
ENSPMAG00000004905	-	99	44.101	ENSPNAG00000015410	caprin1a	51	45.225	Pygocentrus_nattereri
ENSPMAG00000004905	-	100	48.986	ENSRBIG00000028278	CAPRIN1	51	49.123	Rhinopithecus_bieti
ENSPMAG00000004905	-	100	46.974	ENSSFOG00015015517	CAPRIN1	50	45.376	Scleropages_formosus
ENSPMAG00000004905	-	100	46.439	ENSSFOG00015012323	CAPRIN1	51	45.251	Scleropages_formosus
ENSPMAG00000004905	-	54	52.941	ENSSMAG00000010570	caprin1b	52	42.895	Scophthalmus_maximus
ENSPMAG00000004905	-	100	42.368	ENSSDUG00000021916	caprin1b	56	42.667	Seriola_dumerili
ENSPMAG00000004905	-	100	44.092	ENSSDUG00000008887	caprin1a	53	44.092	Seriola_dumerili
ENSPMAG00000004905	-	100	42.781	ENSSLDG00000005156	caprin1b	54	42.513	Seriola_lalandi_dorsalis
ENSPMAG00000004905	-	100	43.391	ENSSLDG00000023896	caprin1a	54	43.678	Seriola_lalandi_dorsalis
ENSPMAG00000004905	-	99	49.271	ENSSARG00000013425	CAPRIN1	52	48.433	Sorex_araneus
ENSPMAG00000004905	-	100	47.989	ENSSPUG00000010728	CAPRIN1	50	48.986	Sphenodon_punctatus
ENSPMAG00000004905	-	90	52.910	ENSSPAG00000013990	caprin1b	53	41.361	Stegastes_partitus
ENSPMAG00000004905	-	100	45.402	ENSSPAG00000019093	caprin1a	54	43.642	Stegastes_partitus
ENSPMAG00000004905	-	100	46.218	ENSTRUG00000017061	caprin1b	51	44.886	Takifugu_rubripes
ENSPMAG00000004905	-	100	45.125	ENSTNIG00000016043	caprin1b	51	45.892	Tetraodon_nigroviridis
ENSPMAG00000004905	-	100	44.058	ENSTNIG00000009387	caprin1a	52	43.768	Tetraodon_nigroviridis
ENSPMAG00000004905	-	100	48.116	ENSTTRG00000007738	CAPRIN1	50	48.159	Tursiops_truncatus
ENSPMAG00000004905	-	99	49.271	ENSUMAG00000018261	CAPRIN1	53	48.433	Ursus_maritimus
ENSPMAG00000004905	-	100	48.986	ENSVVUG00000010396	CAPRIN1	52	48.433	Vulpes_vulpes
ENSPMAG00000004905	-	100	47.126	ENSXETG00000003985	caprin1	60	46.505	Xenopus_tropicalis
ENSPMAG00000004905	-	93	38.110	ENSXETG00000007516	caprin2	55	35.799	Xenopus_tropicalis
ENSPMAG00000004905	-	100	39.660	ENSXCOG00000011070	caprin1a	52	38.781	Xiphophorus_couchianus
ENSPMAG00000004905	-	100	43.266	ENSXMAG00000007148	caprin1a	53	42.061	Xiphophorus_maculatus
ENSPMAG00000004905	-	100	47.059	ENSXMAG00000007287	caprin1b	55	47.606	Xiphophorus_maculatus