EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPMAG00000004916 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Minus strand
Length
43574 bases
Position
chrGL476576:12922-56495
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPMAP00000005403RRM_1PF00076.223.6e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPMAT00000005423-987-ENSPMAP00000005403328 (aa)-S4RJM0
Gene Model
Click here to download ENSPMAG00000004916's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004916's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPMAG00000004916-7576.707ENSPMAG00000007358-8063.235
ENSPMAG00000004916-10075.749ENSPMAG00000004019-8775.749
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPMAG00000004916-7571.595ENSG00000076067RBMS210055.949Homo_sapiens
ENSPMAG00000004916-10062.121ENSAPOG00000014215rbms2b6674.803Acanthochromis_polyacanthus
ENSPMAG00000004916-9967.683ENSAPOG00000023300rbms2a8567.683Acanthochromis_polyacanthus
ENSPMAG00000004916-7570.817ENSAMEG00000004054RBMS27758.407Ailuropoda_melanoleuca
ENSPMAG00000004916-10065.046ENSACIG00000021779rbms2a9962.416Amphilophus_citrinellus
ENSPMAG00000004916-10066.261ENSAOCG00000008301rbms2a7180.567Amphiprion_ocellaris
ENSPMAG00000004916-10062.727ENSAOCG00000024245rbms2b7362.727Amphiprion_ocellaris
ENSPMAG00000004916-10065.758ENSAPEG00000010379rbms2a7565.165Amphiprion_percula
ENSPMAG00000004916-10062.727ENSAPEG00000003556rbms2b7362.727Amphiprion_percula
ENSPMAG00000004916-10066.261ENSATEG00000024715rbms2a7566.261Anabas_testudineus
ENSPMAG00000004916-10062.727ENSATEG00000022569rbms2b6573.790Anabas_testudineus
ENSPMAG00000004916-10064.242ENSACAG00000016623RBMS27464.242Anolis_carolinensis
ENSPMAG00000004916-7556.420ENSANAG00000038292RBMS26256.420Aotus_nancymaae
ENSPMAG00000004916-10064.970ENSACLG00000002393rbms2a9961.258Astatotilapia_calliptera
ENSPMAG00000004916-10062.424ENSACLG00000006706rbms2b7462.424Astatotilapia_calliptera
ENSPMAG00000004916-10062.918ENSAMXG00000024719rbms2a7562.918Astyanax_mexicanus
ENSPMAG00000004916-10064.242ENSAMXG00000017399rbms2b7364.242Astyanax_mexicanus
ENSPMAG00000004916-7570.817ENSBTAG00000017830RBMS26370.817Bos_taurus
ENSPMAG00000004916-7069.456ENSCJAG00000038571-5269.456Callithrix_jacchus
ENSPMAG00000004916-7570.039ENSCJAG00000010803RBMS26174.641Callithrix_jacchus
ENSPMAG00000004916-10058.944ENSCAFG00000000134RBMS27658.997Canis_familiaris
ENSPMAG00000004916-10058.944ENSCAFG00020024460RBMS28258.997Canis_lupus_dingo
ENSPMAG00000004916-10057.817ENSCHIG00000020791RBMS27166.920Capra_hircus
ENSPMAG00000004916-7570.039ENSTSYG00000001167RBMS26569.298Carlito_syrichta
ENSPMAG00000004916-6838.697ENSCAPG00000007348-7838.153Cavia_aperea
ENSPMAG00000004916-7571.206ENSCPOG00000008256RBMS27658.407Cavia_porcellus
ENSPMAG00000004916-7571.875ENSCCAG00000030291RBMS28169.869Cebus_capucinus
ENSPMAG00000004916-7572.093ENSCATG00000003342RBMS26672.093Cercocebus_atys
ENSPMAG00000004916-7568.952ENSCLAG00000012661RBMS26168.952Chinchilla_lanigera
ENSPMAG00000004916-7571.984ENSCSAG00000005074RBMS27659.292Chlorocebus_sabaeus
ENSPMAG00000004916-6656.195ENSCHOG00000007372RBMS25656.195Choloepus_hoffmanni
ENSPMAG00000004916-10063.636ENSCPBG00000014176RBMS27563.636Chrysemys_picta_bellii
ENSPMAG00000004916-7551.394ENSCING00000006391-5851.394Ciona_intestinalis
ENSPMAG00000004916-7549.200ENSCSAVG00000004539-6072.152Ciona_savignyi
ENSPMAG00000004916-7572.093ENSCANG00000038904RBMS26672.093Colobus_angolensis_palliatus
ENSPMAG00000004916-10058.182ENSCGRG00001023923Rbms27558.182Cricetulus_griseus_chok1gshd
ENSPMAG00000004916-10058.182ENSCGRG00000017259Rbms27558.182Cricetulus_griseus_crigri
ENSPMAG00000004916-10061.818ENSCSEG00000008180rbms2b8159.091Cynoglossus_semilaevis
ENSPMAG00000004916-5982.902ENSCSEG00000003790rbms2a5782.902Cynoglossus_semilaevis
ENSPMAG00000004916-10058.788ENSCVAG00000013006rbms2b8058.788Cyprinodon_variegatus
ENSPMAG00000004916-10064.742ENSCVAG00000001635rbms2a6282.383Cyprinodon_variegatus
ENSPMAG00000004916-10063.855ENSDARG00000056150rbms2b7563.855Danio_rerio
ENSPMAG00000004916-10063.363ENSDARG00000044179rbms2a7663.363Danio_rerio
ENSPMAG00000004916-7557.692ENSDNOG00000011198RBMS27647.801Dasypus_novemcinctus
ENSPMAG00000004916-10048.673ENSDORG00000009231Rbms27648.968Dipodomys_ordii
ENSPMAG00000004916-10068.997ENSEBUG00000003216-7584.146Eptatretus_burgeri
ENSPMAG00000004916-10070.427ENSEBUG00000015959-7470.427Eptatretus_burgeri
ENSPMAG00000004916-10062.874ENSEBUG00000003357-7175.502Eptatretus_burgeri
ENSPMAG00000004916-10059.882ENSEASG00005005834RBMS26571.930Equus_asinus_asinus
ENSPMAG00000004916-10059.882ENSECAG00000013470RBMS27859.292Equus_caballus
ENSPMAG00000004916-7573.092ENSELUG00000007892rbms2b6573.092Esox_lucius
ENSPMAG00000004916-10079.902ENSELUG00000019834rbms2a6779.902Esox_lucius
ENSPMAG00000004916-10058.407ENSFCAG00000012028RBMS26570.742Felis_catus
ENSPMAG00000004916-10058.485ENSFDAG00000009949RBMS27558.485Fukomys_damarensis
ENSPMAG00000004916-10059.697ENSFHEG00000023377rbms2b6373.387Fundulus_heteroclitus
ENSPMAG00000004916-10063.855ENSFHEG00000022377rbms2a7564.134Fundulus_heteroclitus
ENSPMAG00000004916-10058.485ENSGMOG00000005250rbms2b9058.485Gadus_morhua
ENSPMAG00000004916-7571.084ENSGALG00000038757RBMS27558.485Gallus_gallus
ENSPMAG00000004916-10059.091ENSGAFG00000009648rbms2b7358.788Gambusia_affinis
ENSPMAG00000004916-10063.554ENSGAFG00000002548rbms2a8063.554Gambusia_affinis
ENSPMAG00000004916-10057.879ENSGACG00000009332rbms2b7257.879Gasterosteus_aculeatus
ENSPMAG00000004916-10065.957ENSGACG00000000617rbms2a7565.957Gasterosteus_aculeatus
ENSPMAG00000004916-10063.939ENSGAGG00000000381RBMS27563.939Gopherus_agassizii
ENSPMAG00000004916-7568.548ENSGGOG00000028247-7953.333Gorilla_gorilla
ENSPMAG00000004916-5983.420ENSHBUG00000023230rbms2a6283.420Haplochromis_burtoni
ENSPMAG00000004916-10050.000ENSHBUG00000005313rbms2b7850.000Haplochromis_burtoni
ENSPMAG00000004916-10059.882ENSHGLG00000018238RBMS27659.882Heterocephalus_glaber_female
ENSPMAG00000004916-10059.882ENSHGLG00100011594RBMS27659.882Heterocephalus_glaber_male
ENSPMAG00000004916-10061.212ENSHCOG00000019929rbms2b7461.212Hippocampus_comes
ENSPMAG00000004916-7580.162ENSHCOG00000020072rbms2a6480.162Hippocampus_comes
ENSPMAG00000004916-10064.134ENSIPUG00000001757rbms2a6281.865Ictalurus_punctatus
ENSPMAG00000004916-10062.727ENSIPUG00000021323RBMS28159.697Ictalurus_punctatus
ENSPMAG00000004916-10058.702ENSSTOG00000013442RBMS27658.702Ictidomys_tridecemlineatus
ENSPMAG00000004916-10057.692ENSJJAG00000015563-7657.692Jaculus_jaculus
ENSPMAG00000004916-10058.407ENSJJAG00000015940-7658.407Jaculus_jaculus
ENSPMAG00000004916-10059.697ENSKMAG00000021167rbms2b7559.697Kryptolebias_marmoratus
ENSPMAG00000004916-9960.486ENSLBEG00000010843rbms2b9953.481Labrus_bergylta
ENSPMAG00000004916-10064.157ENSLBEG00000017716rbms2a7960.790Labrus_bergylta
ENSPMAG00000004916-10054.412ENSLACG00000018651RBMS27654.412Latimeria_chalumnae
ENSPMAG00000004916-10065.455ENSLOCG00000006148rbms2a7566.061Lepisosteus_oculatus
ENSPMAG00000004916-7575.403ENSLAFG00000008251RBMS27562.121Loxodonta_africana
ENSPMAG00000004916-7572.093ENSMFAG00000002049RBMS26672.093Macaca_fascicularis
ENSPMAG00000004916-7571.984ENSMMUG00000019330RBMS26571.053Macaca_mulatta
ENSPMAG00000004916-7572.093ENSMNEG00000035121RBMS26672.093Macaca_nemestrina
ENSPMAG00000004916-7572.093ENSMLEG00000032780RBMS26672.093Mandrillus_leucophaeus
ENSPMAG00000004916-10058.529ENSMAMG00000007264rbms2b7758.284Mastacembelus_armatus
ENSPMAG00000004916-10065.350ENSMAMG00000003821rbms2a8161.094Mastacembelus_armatus
ENSPMAG00000004916-10064.438ENSMZEG00005006839rbms2a7564.438Maylandia_zebra
ENSPMAG00000004916-10062.424ENSMZEG00005027195rbms2b7462.424Maylandia_zebra
ENSPMAG00000004916-9049.660ENSMAUG00000016984Rbms210049.660Mesocricetus_auratus
ENSPMAG00000004916-10059.118ENSMICG00000001075RBMS26174.286Microcebus_murinus
ENSPMAG00000004916-10059.091ENSMOCG00000015140Rbms27559.091Microtus_ochrogaster
ENSPMAG00000004916-7569.444ENSMMOG00000021869rbms2a7169.444Mola_mola
ENSPMAG00000004916-10061.212ENSMMOG00000009177rbms2b8161.212Mola_mola
ENSPMAG00000004916-10062.424ENSMALG00000014520rbms2b7362.121Monopterus_albus
ENSPMAG00000004916-10066.261ENSMALG00000016900rbms2a7566.261Monopterus_albus
ENSPMAG00000004916-10056.970MGP_CAROLIEiJ_G0015921Rbms27456.970Mus_caroli
ENSPMAG00000004916-10056.970ENSMUSG00000040043Rbms28056.970Mus_musculus
ENSPMAG00000004916-10056.798MGP_PahariEiJ_G0031163Rbms27556.798Mus_pahari
ENSPMAG00000004916-10056.970MGP_SPRETEiJ_G0016746Rbms27456.970Mus_spretus
ENSPMAG00000004916-7570.428ENSMPUG00000001490-7658.407Mustela_putorius_furo
ENSPMAG00000004916-10058.112ENSMLUG00000000530RBMS27657.817Myotis_lucifugus
ENSPMAG00000004916-10058.824ENSNGAG00000001476Rbms27658.824Nannospalax_galili
ENSPMAG00000004916-10064.742ENSNBRG00000019651rbms2a7564.742Neolamprologus_brichardi
ENSPMAG00000004916-7572.581ENSNBRG00000017934rbms2b6672.581Neolamprologus_brichardi
ENSPMAG00000004916-7572.374ENSNLEG00000017466RBMS26571.491Nomascus_leucogenys
ENSPMAG00000004916-8483.019ENSMEUG00000015616RBMS26183.019Notamacropus_eugenii
ENSPMAG00000004916-7568.526ENSODEG00000006249RBMS26868.526Octodon_degus
ENSPMAG00000004916-10061.062ENSONIG00000012198rbms2b7461.062Oreochromis_niloticus
ENSPMAG00000004916-10064.371ENSONIG00000019162rbms2a6678.947Oreochromis_niloticus
ENSPMAG00000004916-7570.817ENSOCUG00000006073RBMS27658.702Oryctolagus_cuniculus
ENSPMAG00000004916-7574.194ENSORLG00000007807rbms2b6574.194Oryzias_latipes
ENSPMAG00000004916-10064.438ENSORLG00000015426rbms2a8264.438Oryzias_latipes
ENSPMAG00000004916-10060.000ENSORLG00020007010rbms2b7860.000Oryzias_latipes_hni
ENSPMAG00000004916-10064.134ENSORLG00020016803rbms2a7564.134Oryzias_latipes_hni
ENSPMAG00000004916-10060.303ENSORLG00015022556rbms2b7760.303Oryzias_latipes_hsok
ENSPMAG00000004916-10063.554ENSORLG00015012519rbms2a7563.554Oryzias_latipes_hsok
ENSPMAG00000004916-5358.382ENSOMEG00000014637-6458.382Oryzias_melastigma
ENSPMAG00000004916-10060.423ENSOMEG00000016468rbms2b8060.423Oryzias_melastigma
ENSPMAG00000004916-10064.134ENSOMEG00000021369rbms2a8264.134Oryzias_melastigma
ENSPMAG00000004916-10057.522ENSOGAG00000003534RBMS27657.522Otolemur_garnettii
ENSPMAG00000004916-10057.817ENSOARG00000008570RBMS27658.112Ovis_aries
ENSPMAG00000004916-7572.093ENSPPAG00000042975-6572.093Pan_paniscus
ENSPMAG00000004916-7570.039ENSPPAG00000033767-7857.817Pan_paniscus
ENSPMAG00000004916-10058.112ENSPPRG00000007678RBMS210055.305Panthera_pardus
ENSPMAG00000004916-10058.407ENSPTIG00000017925RBMS210055.627Panthera_tigris_altaica
ENSPMAG00000004916-7572.093ENSPTRG00000005104RBMS26572.093Pan_troglodytes
ENSPMAG00000004916-7572.093ENSPANG00000014113RBMS26672.093Papio_anubis
ENSPMAG00000004916-10064.438ENSPKIG00000006676rbms2a7564.438Paramormyrops_kingsleyae
ENSPMAG00000004916-9961.728ENSPMGG00000022594rbms2a7461.728Periophthalmus_magnuspinnatus
ENSPMAG00000004916-7372.177ENSPEMG00000012948Rbms27659.172Peromyscus_maniculatus_bairdii
ENSPMAG00000004916-10063.142ENSPCIG00000018048RBMS210057.778Phascolarctos_cinereus
ENSPMAG00000004916-10064.134ENSPFOG00000002734rbms2a7563.554Poecilia_formosa
ENSPMAG00000004916-10059.394ENSPFOG00000002923rbms2b8056.647Poecilia_formosa
ENSPMAG00000004916-10059.394ENSPLAG00000012535-7359.394Poecilia_latipinna
ENSPMAG00000004916-10064.438ENSPLAG00000001303rbms2a7863.855Poecilia_latipinna
ENSPMAG00000004916-10064.438ENSPMEG00000020550rbms2a7563.855Poecilia_mexicana
ENSPMAG00000004916-6374.879ENSPMEG00000015689rbms2b5974.879Poecilia_mexicana
ENSPMAG00000004916-9958.663ENSPREG00000020560rbms2b8157.567Poecilia_reticulata
ENSPMAG00000004916-6477.619ENSPREG00000015038rbms2a7071.795Poecilia_reticulata
ENSPMAG00000004916-7571.984ENSPPYG00000004665RBMS27658.997Pongo_abelii
ENSPMAG00000004916-7170.782ENSPCAG00000010311RBMS26070.782Procavia_capensis
ENSPMAG00000004916-7571.984ENSPCOG00000016699-6174.882Propithecus_coquereli
ENSPMAG00000004916-9050.654ENSPCOG00000014899-10050.654Propithecus_coquereli
ENSPMAG00000004916-7571.875ENSPVAG00000007616RBMS27658.876Pteropus_vampyrus
ENSPMAG00000004916-10062.424ENSPNYG00000017656rbms2b7462.424Pundamilia_nyererei
ENSPMAG00000004916-10064.742ENSPNYG00000020829rbms2a7564.742Pundamilia_nyererei
ENSPMAG00000004916-10063.939ENSPNAG00000019569rbms2b8160.606Pygocentrus_nattereri
ENSPMAG00000004916-10065.350ENSPNAG00000000408rbms2a7565.350Pygocentrus_nattereri
ENSPMAG00000004916-7570.930ENSRNOG00000003076Rbms27758.407Rattus_norvegicus
ENSPMAG00000004916-7572.093ENSRBIG00000036293RBMS26672.093Rhinopithecus_bieti
ENSPMAG00000004916-7572.093ENSRROG00000044831RBMS28258.702Rhinopithecus_roxellana
ENSPMAG00000004916-7564.634ENSSBOG00000028640RBMS27761.009Saimiri_boliviensis_boliviensis
ENSPMAG00000004916-10064.134ENSSFOG00015015788rbms2a8160.790Scleropages_formosus
ENSPMAG00000004916-10066.364ENSSFOG00015006642-6085.567Scleropages_formosus
ENSPMAG00000004916-10062.310ENSSMAG00000003683rbms2a8162.048Scophthalmus_maximus
ENSPMAG00000004916-10062.424ENSSMAG00000004221rbms2b6674.609Scophthalmus_maximus
ENSPMAG00000004916-10063.333ENSSDUG00000013574rbms2b6675.984Seriola_dumerili
ENSPMAG00000004916-10065.957ENSSDUG00000005666rbms2a7374.632Seriola_dumerili
ENSPMAG00000004916-10063.333ENSSLDG00000004447rbms2b6873.790Seriola_lalandi_dorsalis
ENSPMAG00000004916-10065.957ENSSLDG00000003394rbms2a7374.632Seriola_lalandi_dorsalis
ENSPMAG00000004916-10062.121ENSSPAG00000022418rbms2b7362.121Stegastes_partitus
ENSPMAG00000004916-10065.957ENSSPAG00000000639rbms2a8162.614Stegastes_partitus
ENSPMAG00000004916-10058.997ENSSSCG00000000402RBMS27658.997Sus_scrofa
ENSPMAG00000004916-10059.394ENSTRUG00000006839rbms2b7959.394Takifugu_rubripes
ENSPMAG00000004916-10063.830ENSTRUG00000008492rbms2a7563.830Takifugu_rubripes
ENSPMAG00000004916-10064.583ENSTNIG00000014563rbms2a7964.583Tetraodon_nigroviridis
ENSPMAG00000004916-10060.000ENSTNIG00000015056rbms2b7560.000Tetraodon_nigroviridis
ENSPMAG00000004916-5182.727ENSTBEG00000009515RBMS25285.577Tupaia_belangeri
ENSPMAG00000004916-7565.759ENSTTRG00000002117RBMS27653.687Tursiops_truncatus
ENSPMAG00000004916-10058.702ENSUAMG00000021435RBMS25880.412Ursus_americanus
ENSPMAG00000004916-7571.705ENSUMAG00000017426RBMS26871.705Ursus_maritimus
ENSPMAG00000004916-7373.016ENSVPAG00000004022RBMS26673.016Vicugna_pacos
ENSPMAG00000004916-10058.944ENSVVUG00000021554RBMS27658.140Vulpes_vulpes
ENSPMAG00000004916-9961.272ENSXETG00000021787rbms28761.272Xenopus_tropicalis
ENSPMAG00000004916-7572.581ENSXCOG00000006995rbms2b6872.581Xiphophorus_couchianus
ENSPMAG00000004916-9160.396ENSXCOG00000018635rbms2a9958.389Xiphophorus_couchianus
ENSPMAG00000004916-10063.830ENSXMAG00000002318rbms2a8263.253Xiphophorus_maculatus
ENSPMAG00000004916-10058.788ENSXMAG00000011428rbms2b8058.788Xiphophorus_maculatus

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