EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000004923 (Gene tree)
Gene ID: -
Gene Symbol: SNRPB
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5025 bases
Position: chrGL486055:344-5368
Accession: 11153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005388	LSM	PF01423.22	3.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005408	SNRPB-201	345	-	ENSPMAP00000005388	89 (aa)	-	S4RJK5

Gene Model

Click here to download ENSPMAG00000004923's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004923's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000004923	SNRPB	80	32.394	ENSPMAG00000006001	naa38	67	32.394

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004923	SNRPB	100	93.258	ENSG00000125835	SNRPB	74	94.231	Homo_sapiens
ENSPMAG00000004923	SNRPB	65	72.414	ENSAPEG00000008846	-	88	72.414	Amphiprion_percula
ENSPMAG00000004923	SNRPB	62	72.727	ENSBTAG00000024548	-	74	72.727	Bos_taurus
ENSPMAG00000004923	SNRPB	62	89.091	ENSCJAG00000041673	-	71	89.091	Callithrix_jacchus
ENSPMAG00000004923	SNRPB	53	91.489	ENSCAFG00020020370	-	63	91.489	Canis_lupus_dingo
ENSPMAG00000004923	SNRPB	82	86.301	ENSCAFG00020016234	-	72	86.301	Canis_lupus_dingo
ENSPMAG00000004923	SNRPB	63	78.571	ENSCAFG00020003638	-	73	78.571	Canis_lupus_dingo
ENSPMAG00000004923	SNRPB	55	91.837	ENSCAFG00020013247	-	58	91.837	Canis_lupus_dingo
ENSPMAG00000004923	SNRPB	62	72.727	ENSCHIG00000024610	-	76	74.510	Capra_hircus
ENSPMAG00000004923	SNRPB	99	84.091	ENSCCAG00000035140	-	89	80.392	Cebus_capucinus
ENSPMAG00000004923	SNRPB	100	93.258	ENSCANG00000019461	SNRPB	80	78.788	Colobus_angolensis_palliatus
ENSPMAG00000004923	SNRPB	60	67.925	ENSFCAG00000041049	-	65	67.925	Felis_catus
ENSPMAG00000004923	SNRPB	78	59.420	ENSFHEG00000006534	-	78	59.420	Fundulus_heteroclitus
ENSPMAG00000004923	SNRPB	58	94.231	ENSMAUG00000006516	-	80	94.231	Mesocricetus_auratus
ENSPMAG00000004923	SNRPB	66	79.688	ENSMAUG00000020656	-	82	79.688	Mesocricetus_auratus
ENSPMAG00000004923	SNRPB	100	93.258	MGP_CAROLIEiJ_G0024293	Snrpb	74	94.231	Mus_caroli
ENSPMAG00000004923	SNRPB	100	93.258	ENSMUSG00000027404	Snrpb	74	94.231	Mus_musculus
ENSPMAG00000004923	SNRPB	100	93.258	MGP_PahariEiJ_G0025738	Snrpb	74	94.231	Mus_pahari
ENSPMAG00000004923	SNRPB	100	93.258	MGP_SPRETEiJ_G0025213	Snrpb	82	85.246	Mus_spretus
ENSPMAG00000004923	SNRPB	66	67.797	ENSPPRG00000024804	-	79	69.091	Panthera_pardus
ENSPMAG00000004923	SNRPB	70	72.581	ENSPPRG00000018908	-	70	72.581	Panthera_pardus
ENSPMAG00000004923	SNRPB	100	93.258	ENSRNOG00000006961	Snrpb	73	94.231	Rattus_norvegicus
ENSPMAG00000004923	SNRPB	58	69.231	ENSUAMG00000016301	-	70	69.231	Ursus_americanus
ENSPMAG00000004923	SNRPB	58	69.231	ENSUMAG00000011571	-	63	69.231	Ursus_maritimus
ENSPMAG00000004923	SNRPB	63	85.714	ENSVVUG00000011423	-	73	85.714	Vulpes_vulpes
ENSPMAG00000004923	SNRPB	82	87.671	ENSXCOG00000017217	snrpb	86	87.671	Xiphophorus_couchianus