EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000004930 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: -
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5302 bases
Position: chrGL477585:3472-8773
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005435	Nucleoplasmin	PF03066.15	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005455	-	926	-	ENSPMAP00000005435	274 (aa)	-	S4RJQ2

Gene Model

Click here to download ENSPMAG00000004930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000004930's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000004930	npm1b	99	37.801	ENSAPOG00000004268	npm1b	93	37.801	Acanthochromis_polyacanthus
ENSPMAG00000004930	npm1b	99	37.241	ENSAOCG00000012549	npm1b	93	37.241	Amphiprion_ocellaris
ENSPMAG00000004930	npm1b	99	36.934	ENSAPEG00000000868	npm1b	93	38.328	Amphiprion_percula
ENSPMAG00000004930	npm1b	99	36.749	ENSACAG00000015626	-	94	36.806	Anolis_carolinensis
ENSPMAG00000004930	npm1b	99	34.146	ENSAMXG00000042148	npm1b	89	33.818	Astyanax_mexicanus
ENSPMAG00000004930	npm1b	85	32.143	ENSCAFG00000023359	-	91	30.380	Canis_familiaris
ENSPMAG00000004930	npm1b	99	40.569	ENSCPBG00000021221	-	56	40.925	Chrysemys_picta_bellii
ENSPMAG00000004930	npm1b	99	34.021	ENSCSEG00000004530	npm1b	93	36.364	Cynoglossus_semilaevis
ENSPMAG00000004930	npm1b	99	34.386	ENSCVAG00000013016	npm1b	88	34.328	Cyprinodon_variegatus
ENSPMAG00000004930	npm1b	99	37.500	ENSDARG00000037675	npm1b	94	37.370	Danio_rerio
ENSPMAG00000004930	npm1b	99	34.694	ENSELUG00000022123	npm1b	88	35.018	Esox_lucius
ENSPMAG00000004930	npm1b	99	41.007	ENSFALG00000003320	-	93	40.714	Ficedula_albicollis
ENSPMAG00000004930	npm1b	99	34.615	ENSFHEG00000020794	npm1b	88	36.059	Fundulus_heteroclitus
ENSPMAG00000004930	npm1b	99	36.207	ENSGMOG00000002689	npm1b	89	35.165	Gadus_morhua
ENSPMAG00000004930	npm1b	99	40.647	ENSGALG00000002197	-	68	40.000	Gallus_gallus
ENSPMAG00000004930	npm1b	99	40.071	ENSGAGG00000020250	-	93	40.989	Gopherus_agassizii
ENSPMAG00000004930	npm1b	99	37.193	ENSHCOG00000003895	npm1b	93	37.193	Hippocampus_comes
ENSPMAG00000004930	npm1b	99	41.367	ENSMGAG00000001591	-	100	40.714	Meleagris_gallopavo
ENSPMAG00000004930	npm1b	99	34.643	ENSONIG00000001397	npm1b	92	35.842	Oreochromis_niloticus
ENSPMAG00000004930	npm1b	99	35.154	ENSOMEG00000003414	npm1b	93	35.789	Oryzias_melastigma
ENSPMAG00000004930	npm1b	100	36.149	ENSPKIG00000020050	npm1b	94	36.949	Paramormyrops_kingsleyae
ENSPMAG00000004930	npm1b	99	39.643	ENSPSIG00000011204	-	90	38.929	Pelodiscus_sinensis
ENSPMAG00000004930	npm1b	99	35.563	ENSPFOG00000018357	npm1b	88	35.821	Poecilia_formosa
ENSPMAG00000004930	npm1b	99	35.664	ENSPNAG00000005498	npm1b	88	37.175	Pygocentrus_nattereri
ENSPMAG00000004930	npm1b	99	37.324	ENSSFOG00015005064	npm1b	89	35.766	Scleropages_formosus
ENSPMAG00000004930	npm1b	99	36.332	ENSSDUG00000007726	npm1b	93	37.370	Seriola_dumerili
ENSPMAG00000004930	npm1b	99	36.332	ENSSLDG00000021396	npm1b	93	37.716	Seriola_lalandi_dorsalis
ENSPMAG00000004930	npm1b	99	34.643	ENSSPAG00000011152	npm1b	93	37.063	Stegastes_partitus
ENSPMAG00000004930	npm1b	99	40.925	ENSTGUG00000014970	-	100	39.929	Taeniopygia_guttata
ENSPMAG00000004930	npm1b	99	38.947	ENSTRUG00000008105	npm1b	83	38.433	Takifugu_rubripes
ENSPMAG00000004930	npm1b	99	37.324	ENSTNIG00000013057	npm1b	93	37.324	Tetraodon_nigroviridis
ENSPMAG00000004930	npm1b	99	36.364	ENSXETG00000008403	npm1	93	35.889	Xenopus_tropicalis
ENSPMAG00000004930	npm1b	99	35.154	ENSXMAG00000001986	npm1b	88	35.556	Xiphophorus_maculatus