EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000005064 (Gene tree)
Gene ID: -
Gene Symbol: ercc6l
Alias: -
Full Name: excision repair cross-complementation group 6-like
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 15769 bases
Position: chrGL476474:91271-107039
Accession: ZDB-GENE-060531-56
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005577	ResIII	PF04851.15	3.5e-10	1	1
ENSPMAP00000005569	ResIII	PF04851.15	4.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005590	-	2403	-	ENSPMAP00000005569	801 (aa)	-	S4RK36
ENSPMAT00000005598	-	2175	-	ENSPMAP00000005577	725 (aa)	-	S4RK44

Gene Model

Click here to download ENSPMAG00000005064's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005064's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000005064	ercc6l	76	33.275	ENSPMAG00000002916	rad54b	65	33.507
ENSPMAG00000005064	ercc6l	70	30.263	ENSPMAG00000007719	rad54l	64	30.377
ENSPMAG00000005064	ercc6l	59	39.884	ENSPMAG00000001636	rad54l2	66	39.884
ENSPMAG00000005064	ercc6l	67	32.207	ENSPMAG00000003871	-	80	33.002

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005064	ercc6l	98	58.881	ENSG00000186871	ERCC6L	63	55.680	Homo_sapiens
ENSPMAG00000005064	ercc6l	94	59.118	ENSAPOG00000011392	ercc6l	99	59.145	Acanthochromis_polyacanthus
ENSPMAG00000005064	ercc6l	99	58.345	ENSAMEG00000005804	ERCC6L	63	56.085	Ailuropoda_melanoleuca
ENSPMAG00000005064	ercc6l	100	58.333	ENSAOCG00000016285	-	68	56.499	Amphiprion_ocellaris
ENSPMAG00000005064	ercc6l	100	59.426	ENSAOCG00000016323	ercc6l	63	57.308	Amphiprion_ocellaris
ENSPMAG00000005064	ercc6l	100	59.699	ENSAPEG00000022533	ERCC6L	71	59.499	Amphiprion_percula
ENSPMAG00000005064	ercc6l	100	58.333	ENSAPEG00000022499	ercc6l	67	56.589	Amphiprion_percula
ENSPMAG00000005064	ercc6l	99	60.768	ENSATEG00000012969	ercc6l	69	59.737	Anabas_testudineus
ENSPMAG00000005064	ercc6l	92	61.458	ENSACAG00000028866	-	91	61.940	Anolis_carolinensis
ENSPMAG00000005064	ercc6l	92	61.401	ENSACAG00000029354	-	94	61.883	Anolis_carolinensis
ENSPMAG00000005064	ercc6l	99	58.815	ENSACAG00000001226	-	68	56.726	Anolis_carolinensis
ENSPMAG00000005064	ercc6l	98	58.799	ENSANAG00000022378	ERCC6L	61	56.688	Aotus_nancymaae
ENSPMAG00000005064	ercc6l	99	59.671	ENSACLG00000006555	ercc6l	58	59.115	Astatotilapia_calliptera
ENSPMAG00000005064	ercc6l	99	60.552	ENSAMXG00000004780	ercc6l	62	59.866	Astyanax_mexicanus
ENSPMAG00000005064	ercc6l	64	35.504	ENSAMXG00000035908	-	88	35.504	Astyanax_mexicanus
ENSPMAG00000005064	ercc6l	98	58.708	ENSBTAG00000005607	ERCC6L	63	55.864	Bos_taurus
ENSPMAG00000005064	ercc6l	99	59.135	ENSCJAG00000022332	ERCC6L	62	56.336	Callithrix_jacchus
ENSPMAG00000005064	ercc6l	99	57.438	ENSCAFG00000023690	ERCC6L	62	55.290	Canis_familiaris
ENSPMAG00000005064	ercc6l	85	59.903	ENSCAFG00020021313	ERCC6L	60	57.416	Canis_lupus_dingo
ENSPMAG00000005064	ercc6l	98	58.989	ENSCHIG00000009967	ERCC6L	63	55.919	Capra_hircus
ENSPMAG00000005064	ercc6l	98	59.187	ENSTSYG00000013701	ERCC6L	56	59.972	Carlito_syrichta
ENSPMAG00000005064	ercc6l	98	57.504	ENSCPOG00000011407	ERCC6L	62	54.826	Cavia_porcellus
ENSPMAG00000005064	ercc6l	98	58.856	ENSCCAG00000023790	ERCC6L	63	55.680	Cebus_capucinus
ENSPMAG00000005064	ercc6l	98	59.014	ENSCATG00000038031	ERCC6L	63	55.556	Cercocebus_atys
ENSPMAG00000005064	ercc6l	98	57.865	ENSCLAG00000015218	-	56	58.840	Chinchilla_lanigera
ENSPMAG00000005064	ercc6l	98	57.525	ENSCLAG00000017785	-	63	55.513	Chinchilla_lanigera
ENSPMAG00000005064	ercc6l	98	58.873	ENSCSAG00000011173	ERCC6L	62	55.752	Chlorocebus_sabaeus
ENSPMAG00000005064	ercc6l	99	59.388	ENSCPBG00000011965	ERCC6L	86	61.101	Chrysemys_picta_bellii
ENSPMAG00000005064	ercc6l	78	52.797	ENSCSAVG00000010291	-	98	52.797	Ciona_savignyi
ENSPMAG00000005064	ercc6l	98	58.592	ENSCANG00000016909	ERCC6L	63	55.181	Colobus_angolensis_palliatus
ENSPMAG00000005064	ercc6l	98	56.942	ENSCGRG00001016668	Ercc6l	62	55.146	Cricetulus_griseus_chok1gshd
ENSPMAG00000005064	ercc6l	98	56.942	ENSCGRG00000006223	Ercc6l	62	55.146	Cricetulus_griseus_crigri
ENSPMAG00000005064	ercc6l	99	59.034	ENSCSEG00000010268	ercc6l	60	58.243	Cynoglossus_semilaevis
ENSPMAG00000005064	ercc6l	95	58.466	ENSCVAG00000008090	ercc6l	96	58.551	Cyprinodon_variegatus
ENSPMAG00000005064	ercc6l	100	59.972	ENSDARG00000002479	ercc6l	53	57.935	Danio_rerio
ENSPMAG00000005064	ercc6l	99	57.182	ENSDNOG00000032356	ERCC6L	61	55.155	Dasypus_novemcinctus
ENSPMAG00000005064	ercc6l	97	57.627	ENSDORG00000007865	Ercc6l	62	54.340	Dipodomys_ordii
ENSPMAG00000005064	ercc6l	77	61.032	ENSETEG00000018007	ERCC6L	51	62.657	Echinops_telfairi
ENSPMAG00000005064	ercc6l	85	60.870	ENSEASG00005007025	ERCC6L	60	57.895	Equus_asinus_asinus
ENSPMAG00000005064	ercc6l	99	58.184	ENSECAG00000002513	ERCC6L	63	55.306	Equus_caballus
ENSPMAG00000005064	ercc6l	89	58.114	ENSEEUG00000015724	ERCC6L	52	58.589	Erinaceus_europaeus
ENSPMAG00000005064	ercc6l	99	61.696	ENSELUG00000007917	ercc6l	64	59.829	Esox_lucius
ENSPMAG00000005064	ercc6l	98	58.626	ENSFCAG00000012038	ERCC6L	63	54.919	Felis_catus
ENSPMAG00000005064	ercc6l	92	61.654	ENSFALG00000011797	ERCC6L	61	57.217	Ficedula_albicollis
ENSPMAG00000005064	ercc6l	100	57.613	ENSFDAG00000019713	ERCC6L	62	56.010	Fukomys_damarensis
ENSPMAG00000005064	ercc6l	99	57.772	ENSFHEG00000007205	ercc6l	60	58.011	Fundulus_heteroclitus
ENSPMAG00000005064	ercc6l	90	57.296	ENSFHEG00000007269	-	94	57.057	Fundulus_heteroclitus
ENSPMAG00000005064	ercc6l	98	59.805	ENSGALG00000003881	ERCC6L	61	56.433	Gallus_gallus
ENSPMAG00000005064	ercc6l	55	71.667	ENSGAFG00000020545	-	99	71.667	Gambusia_affinis
ENSPMAG00000005064	ercc6l	78	59.337	ENSGACG00000001096	ercc6l	97	59.337	Gasterosteus_aculeatus
ENSPMAG00000005064	ercc6l	85	61.514	ENSGAGG00000018784	ERCC6L	62	57.615	Gopherus_agassizii
ENSPMAG00000005064	ercc6l	98	58.873	ENSGGOG00000022367	ERCC6L	63	55.905	Gorilla_gorilla
ENSPMAG00000005064	ercc6l	99	59.889	ENSHBUG00000007810	ercc6l	64	56.375	Haplochromis_burtoni
ENSPMAG00000005064	ercc6l	98	58.403	ENSHGLG00000016594	ERCC6L	62	56.082	Heterocephalus_glaber_female
ENSPMAG00000005064	ercc6l	98	58.403	ENSHGLG00100003339	ERCC6L	62	56.082	Heterocephalus_glaber_male
ENSPMAG00000005064	ercc6l	99	59.673	ENSHCOG00000001051	ercc6l	58	61.080	Hippocampus_comes
ENSPMAG00000005064	ercc6l	100	56.474	ENSIPUG00000016117	ercc6l	56	57.043	Ictalurus_punctatus
ENSPMAG00000005064	ercc6l	98	58.146	ENSJJAG00000022875	Ercc6l	56	59.344	Jaculus_jaculus
ENSPMAG00000005064	ercc6l	99	59.452	ENSKMAG00000011587	ercc6l	60	59.073	Kryptolebias_marmoratus
ENSPMAG00000005064	ercc6l	99	60.111	ENSLBEG00000000091	ercc6l	73	58.520	Labrus_bergylta
ENSPMAG00000005064	ercc6l	99	60.905	ENSLACG00000002634	ERCC6L	58	61.838	Latimeria_chalumnae
ENSPMAG00000005064	ercc6l	99	59.946	ENSLOCG00000013925	ercc6l	63	57.484	Lepisosteus_oculatus
ENSPMAG00000005064	ercc6l	55	41.278	ENSLOCG00000017476	-	96	41.353	Lepisosteus_oculatus
ENSPMAG00000005064	ercc6l	98	59.046	ENSLAFG00000014985	ERCC6L	57	59.410	Loxodonta_africana
ENSPMAG00000005064	ercc6l	98	59.014	ENSMFAG00000045509	ERCC6L	63	55.556	Macaca_fascicularis
ENSPMAG00000005064	ercc6l	98	59.014	ENSMMUG00000012957	ERCC6L	63	55.556	Macaca_mulatta
ENSPMAG00000005064	ercc6l	98	59.014	ENSMNEG00000030867	ERCC6L	63	55.556	Macaca_nemestrina
ENSPMAG00000005064	ercc6l	98	59.014	ENSMLEG00000000190	ERCC6L	63	55.431	Mandrillus_leucophaeus
ENSPMAG00000005064	ercc6l	99	59.671	ENSMAMG00000018595	ercc6l	59	58.553	Mastacembelus_armatus
ENSPMAG00000005064	ercc6l	99	59.671	ENSMZEG00005001556	ercc6l	59	59.115	Maylandia_zebra
ENSPMAG00000005064	ercc6l	98	59.551	ENSMGAG00000002094	ERCC6L	64	56.036	Meleagris_gallopavo
ENSPMAG00000005064	ercc6l	97	57.670	ENSMAUG00000015560	Ercc6l	56	59.110	Mesocricetus_auratus
ENSPMAG00000005064	ercc6l	99	57.931	ENSMICG00000035415	ERCC6L	62	55.359	Microcebus_murinus
ENSPMAG00000005064	ercc6l	98	57.243	ENSMOCG00000021344	Ercc6l	62	54.892	Microtus_ochrogaster
ENSPMAG00000005064	ercc6l	99	61.357	ENSMMOG00000020762	ercc6l	95	76.596	Mola_mola
ENSPMAG00000005064	ercc6l	99	57.320	ENSMODG00000010916	ERCC6L	61	57.322	Monodelphis_domestica
ENSPMAG00000005064	ercc6l	99	59.671	ENSMALG00000003609	ercc6l	59	58.762	Monopterus_albus
ENSPMAG00000005064	ercc6l	99	59.589	ENSMALG00000003561	-	58	57.915	Monopterus_albus
ENSPMAG00000005064	ercc6l	98	57.525	MGP_CAROLIEiJ_G0033297	Ercc6l	62	55.019	Mus_caroli
ENSPMAG00000005064	ercc6l	98	57.525	ENSMUSG00000051220	Ercc6l	62	55.387	Mus_musculus
ENSPMAG00000005064	ercc6l	98	57.525	MGP_PahariEiJ_G0031835	Ercc6l	62	54.892	Mus_pahari
ENSPMAG00000005064	ercc6l	98	57.665	MGP_SPRETEiJ_G0034461	Ercc6l	62	55.626	Mus_spretus
ENSPMAG00000005064	ercc6l	99	58.953	ENSMPUG00000005291	ERCC6L	62	56.870	Mustela_putorius_furo
ENSPMAG00000005064	ercc6l	98	58.931	ENSMLUG00000011670	ERCC6L	62	56.371	Myotis_lucifugus
ENSPMAG00000005064	ercc6l	99	57.299	ENSNGAG00000021063	Ercc6l	62	55.796	Nannospalax_galili
ENSPMAG00000005064	ercc6l	98	58.732	ENSNLEG00000036284	ERCC6L	61	55.924	Nomascus_leucogenys
ENSPMAG00000005064	ercc6l	97	57.955	ENSODEG00000002328	ERCC6L	62	56.609	Octodon_degus
ENSPMAG00000005064	ercc6l	99	60.443	ENSONIG00000000589	ercc6l	65	57.614	Oreochromis_niloticus
ENSPMAG00000005064	ercc6l	99	58.783	ENSOANG00000014708	ERCC6L	58	59.497	Ornithorhynchus_anatinus
ENSPMAG00000005064	ercc6l	98	57.828	ENSOCUG00000008724	ERCC6L	62	54.867	Oryctolagus_cuniculus
ENSPMAG00000005064	ercc6l	84	63.393	ENSORLG00000024240	ercc6l	94	64.671	Oryzias_latipes
ENSPMAG00000005064	ercc6l	99	59.560	ENSORLG00020014999	ercc6l	64	60.749	Oryzias_latipes_hni
ENSPMAG00000005064	ercc6l	67	68.862	ENSORLG00015007108	ercc6l	86	68.862	Oryzias_latipes_hsok
ENSPMAG00000005064	ercc6l	100	60.385	ENSOMEG00000009481	ercc6l	56	60.749	Oryzias_melastigma
ENSPMAG00000005064	ercc6l	98	58.708	ENSOGAG00000031470	-	61	56.472	Otolemur_garnettii
ENSPMAG00000005064	ercc6l	98	59.238	ENSOGAG00000034301	-	62	57.069	Otolemur_garnettii
ENSPMAG00000005064	ercc6l	99	57.989	ENSOARG00000005908	ERCC6L	63	56.138	Ovis_aries
ENSPMAG00000005064	ercc6l	98	58.881	ENSPPAG00000031861	ERCC6L	63	55.680	Pan_paniscus
ENSPMAG00000005064	ercc6l	99	58.091	ENSPPRG00000012408	ERCC6L	64	55.867	Panthera_pardus
ENSPMAG00000005064	ercc6l	98	58.881	ENSPTRG00000022023	ERCC6L	63	55.680	Pan_troglodytes
ENSPMAG00000005064	ercc6l	98	59.014	ENSPANG00000011598	ERCC6L	63	55.556	Papio_anubis
ENSPMAG00000005064	ercc6l	99	59.511	ENSPKIG00000022325	ercc6l	59	57.487	Paramormyrops_kingsleyae
ENSPMAG00000005064	ercc6l	99	59.097	ENSPSIG00000004789	ERCC6L	65	56.801	Pelodiscus_sinensis
ENSPMAG00000005064	ercc6l	98	60.534	ENSPMGG00000023343	ercc6l	67	61.017	Periophthalmus_magnuspinnatus
ENSPMAG00000005064	ercc6l	98	57.283	ENSPEMG00000007920	Ercc6l	62	55.019	Peromyscus_maniculatus_bairdii
ENSPMAG00000005064	ercc6l	99	56.887	ENSPCIG00000026973	ERCC6L	58	57.241	Phascolarctos_cinereus
ENSPMAG00000005064	ercc6l	99	59.396	ENSPFOG00000010410	ercc6l	60	60.437	Poecilia_formosa
ENSPMAG00000005064	ercc6l	99	59.010	ENSPLAG00000005575	ercc6l	64	61.056	Poecilia_latipinna
ENSPMAG00000005064	ercc6l	99	59.534	ENSPMEG00000016911	ercc6l	60	60.573	Poecilia_mexicana
ENSPMAG00000005064	ercc6l	98	59.805	ENSPREG00000017617	ercc6l	68	58.831	Poecilia_reticulata
ENSPMAG00000005064	ercc6l	98	59.014	ENSPPYG00000020461	ERCC6L	63	55.680	Pongo_abelii
ENSPMAG00000005064	ercc6l	99	58.207	ENSPCOG00000024286	ERCC6L	61	56.242	Propithecus_coquereli
ENSPMAG00000005064	ercc6l	98	58.766	ENSPVAG00000013596	ERCC6L	57	59.410	Pteropus_vampyrus
ENSPMAG00000005064	ercc6l	99	60.194	ENSPNYG00000013185	ercc6l	68	59.595	Pundamilia_nyererei
ENSPMAG00000005064	ercc6l	100	59.644	ENSPNAG00000006556	ercc6l	66	58.722	Pygocentrus_nattereri
ENSPMAG00000005064	ercc6l	98	57.525	ENSRNOG00000003208	Ercc6l	62	54.650	Rattus_norvegicus
ENSPMAG00000005064	ercc6l	96	59.510	ENSRBIG00000036588	ERCC6L	63	56.072	Rhinopithecus_bieti
ENSPMAG00000005064	ercc6l	98	58.873	ENSRROG00000042561	ERCC6L	63	55.388	Rhinopithecus_roxellana
ENSPMAG00000005064	ercc6l	98	59.270	ENSSBOG00000029416	ERCC6L	63	55.890	Saimiri_boliviensis_boliviensis
ENSPMAG00000005064	ercc6l	98	57.762	ENSSHAG00000001331	-	64	58.357	Sarcophilus_harrisii
ENSPMAG00000005064	ercc6l	98	56.601	ENSSHAG00000012578	-	64	53.924	Sarcophilus_harrisii
ENSPMAG00000005064	ercc6l	86	42.903	ENSSFOG00015014557	-	52	41.892	Scleropages_formosus
ENSPMAG00000005064	ercc6l	100	60.326	ENSSFOG00015009709	ercc6l	51	61.210	Scleropages_formosus
ENSPMAG00000005064	ercc6l	99	59.097	ENSSDUG00000013307	ercc6l	62	58.696	Seriola_dumerili
ENSPMAG00000005064	ercc6l	99	58.266	ENSSLDG00000014910	ercc6l	66	58.639	Seriola_lalandi_dorsalis
ENSPMAG00000005064	ercc6l	99	60.055	ENSSPUG00000005866	ERCC6L	65	60.221	Sphenodon_punctatus
ENSPMAG00000005064	ercc6l	100	60.000	ENSSPAG00000018472	ercc6l	63	59.357	Stegastes_partitus
ENSPMAG00000005064	ercc6l	98	59.327	ENSSSCG00000021834	ERCC6L	62	56.417	Sus_scrofa
ENSPMAG00000005064	ercc6l	76	58.602	ENSTGUG00000004992	ERCC6L	100	57.793	Taeniopygia_guttata
ENSPMAG00000005064	ercc6l	100	58.560	ENSTRUG00000012053	ercc6l	59	60.709	Takifugu_rubripes
ENSPMAG00000005064	ercc6l	78	58.025	ENSTNIG00000001002	ercc6l	99	59.180	Tetraodon_nigroviridis
ENSPMAG00000005064	ercc6l	99	57.909	ENSTTRG00000010777	ERCC6L	63	55.890	Tursiops_truncatus
ENSPMAG00000005064	ercc6l	85	61.316	ENSUAMG00000015605	ERCC6L	60	58.626	Ursus_americanus
ENSPMAG00000005064	ercc6l	85	61.316	ENSUMAG00000004863	ERCC6L	60	58.626	Ursus_maritimus
ENSPMAG00000005064	ercc6l	99	57.576	ENSVPAG00000010950	ERCC6L	62	55.909	Vicugna_pacos
ENSPMAG00000005064	ercc6l	99	57.713	ENSVVUG00000025512	ERCC6L	61	55.882	Vulpes_vulpes
ENSPMAG00000005064	ercc6l	99	60.912	ENSXETG00000022574	ercc6l	63	59.044	Xenopus_tropicalis
ENSPMAG00000005064	ercc6l	94	57.434	ENSXCOG00000011494	ercc6l	95	58.529	Xiphophorus_couchianus
ENSPMAG00000005064	ercc6l	96	60.776	ENSXMAG00000000948	ercc6l	67	60.508	Xiphophorus_maculatus