EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000005161 (Gene tree)
Gene ID: -
Gene Symbol: CNOT3
Alias: -
Full Name: CCR4-NOT transcription complex subunit 3
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 12322 bases
Position: chrGL480690:3575-15896
Accession: 7879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005680	Not3	PF04065.15	1.1e-90	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005705	CNOT3-201	981	-	ENSPMAP00000005680	327 (aa)	-	S4RKE7

Gene Model

Click here to download ENSPMAG00000005161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005161's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000005161	CNOT3	70	62.931	ENSPMAG00000008665	-	100	62.931

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005161	CNOT3	95	72.204	ENSG00000088038	CNOT3	96	85.027	Homo_sapiens
ENSPMAG00000005161	CNOT3	72	83.898	ENSAPOG00000015499	CNOT3	59	66.061	Acanthochromis_polyacanthus
ENSPMAG00000005161	CNOT3	95	72.524	ENSMOCG00000013249	Cnot3	58	72.524	Microtus_ochrogaster
ENSPMAG00000005161	CNOT3	95	72.524	MGP_CAROLIEiJ_G0029095	Cnot3	92	91.398	Mus_caroli
ENSPMAG00000005161	CNOT3	95	72.524	ENSMUSG00000035632	Cnot3	92	91.398	Mus_musculus
ENSPMAG00000005161	CNOT3	95	72.524	MGP_PahariEiJ_G0020964	Cnot3	92	91.398	Mus_pahari
ENSPMAG00000005161	CNOT3	95	72.524	MGP_SPRETEiJ_G0030148	Cnot3	92	91.398	Mus_spretus
ENSPMAG00000005161	CNOT3	75	82.927	ENSPTIG00000008781	CNOT3	50	74.237	Panthera_tigris_altaica