EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000005322 (Gene tree)
Gene ID: -
Gene Symbol: rab18b
Alias: -
Full Name: RAB18B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 16839 bases
Position: chrGL479868:12906-29744
Accession: ZDB-GENE-040801-185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005880	MMR_HSR1	PF01926.23	6.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005907	-	982	-	ENSPMAP00000005880	208 (aa)	-	S4RKZ6

Gene Model

Click here to download ENSPMAG00000005322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000005322	rab18b	93	44.928	ENSPMAG00000006171	-	97	44.928
ENSPMAG00000005322	rab18b	95	37.879	ENSPMAG00000007867	rab5c	91	37.879
ENSPMAG00000005322	rab18b	79	47.879	ENSPMAG00000002006	-	76	47.879
ENSPMAG00000005322	rab18b	79	31.707	ENSPMAG00000004548	hrasb	85	31.707
ENSPMAG00000005322	rab18b	79	41.212	ENSPMAG00000001399	rab5c	78	41.212
ENSPMAG00000005322	rab18b	87	39.779	ENSPMAG00000000008	rab5c	80	39.779
ENSPMAG00000005322	rab18b	78	50.610	ENSPMAG00000008764	RAB2B	89	50.610
ENSPMAG00000005322	rab18b	78	47.853	ENSPMAG00000009335	-	78	47.853
ENSPMAG00000005322	rab18b	86	45.604	ENSPMAG00000006105	rab30	85	45.604
ENSPMAG00000005322	rab18b	78	32.738	ENSPMAG00000005573	dnajc27	60	32.738
ENSPMAG00000005322	rab18b	80	35.714	ENSPMAG00000000465	MRAS	80	35.714
ENSPMAG00000005322	rab18b	97	45.050	ENSPMAG00000001801	rab1ba	98	45.050
ENSPMAG00000005322	rab18b	78	39.429	ENSPMAG00000005537	rab27a	79	39.429
ENSPMAG00000005322	rab18b	95	40.196	ENSPMAG00000007247	rab33ba	83	40.196
ENSPMAG00000005322	rab18b	79	30.000	ENSPMAG00000000547	rheb	90	30.000
ENSPMAG00000005322	rab18b	73	34.641	ENSPMAG00000006835	-	71	34.911
ENSPMAG00000005322	rab18b	77	40.123	ENSPMAG00000001403	-	80	40.123
ENSPMAG00000005322	rab18b	74	42.308	ENSPMAG00000005938	-	92	42.308
ENSPMAG00000005322	rab18b	83	34.595	ENSPMAG00000004657	rab36	76	34.595
ENSPMAG00000005322	rab18b	56	39.316	ENSPMAG00000004439	rab20	52	39.316
ENSPMAG00000005322	rab18b	86	30.055	ENSPMAG00000006671	si:cabz01085950.1	89	30.055
ENSPMAG00000005322	rab18b	73	33.987	ENSPMAG00000005048	MRAS	81	35.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005322	rab18b	98	85.294	ENSG00000099246	RAB18	98	85.294	Homo_sapiens
ENSPMAG00000005322	rab18b	98	84.314	ENSAPOG00000019881	rab18b	98	84.314	Acanthochromis_polyacanthus
ENSPMAG00000005322	rab18b	98	73.932	ENSAMEG00000015990	RAB18	98	73.932	Ailuropoda_melanoleuca
ENSPMAG00000005322	rab18b	98	85.784	ENSACIG00000008102	rab18b	98	85.784	Amphilophus_citrinellus
ENSPMAG00000005322	rab18b	98	84.314	ENSAOCG00000013479	rab18b	98	84.314	Amphiprion_ocellaris
ENSPMAG00000005322	rab18b	98	84.314	ENSAPEG00000022923	rab18b	98	84.314	Amphiprion_percula
ENSPMAG00000005322	rab18b	99	82.927	ENSATEG00000002952	rab18b	98	82.927	Anabas_testudineus
ENSPMAG00000005322	rab18b	98	85.294	ENSANAG00000035856	RAB18	98	85.294	Aotus_nancymaae
ENSPMAG00000005322	rab18b	98	84.804	ENSACLG00000015289	rab18b	98	84.804	Astatotilapia_calliptera
ENSPMAG00000005322	rab18b	98	86.275	ENSAMXG00000042073	rab18b	98	86.275	Astyanax_mexicanus
ENSPMAG00000005322	rab18b	98	82.843	ENSBTAG00000050873	-	98	82.843	Bos_taurus
ENSPMAG00000005322	rab18b	98	85.294	ENSBTAG00000009871	RAB18	86	85.294	Bos_taurus
ENSPMAG00000005322	rab18b	98	85.294	ENSCJAG00000045749	RAB18	98	85.294	Callithrix_jacchus
ENSPMAG00000005322	rab18b	98	84.804	ENSCAFG00020003253	RAB18	98	84.804	Canis_lupus_dingo
ENSPMAG00000005322	rab18b	98	85.294	ENSCHIG00000008749	RAB18	98	85.294	Capra_hircus
ENSPMAG00000005322	rab18b	98	84.804	ENSTSYG00000013092	RAB18	98	84.804	Carlito_syrichta
ENSPMAG00000005322	rab18b	98	84.804	ENSCPOG00000032827	RAB18	98	84.804	Cavia_porcellus
ENSPMAG00000005322	rab18b	98	85.294	ENSCCAG00000006762	RAB18	98	85.294	Cebus_capucinus
ENSPMAG00000005322	rab18b	98	85.294	ENSCATG00000009672	RAB18	98	85.294	Cercocebus_atys
ENSPMAG00000005322	rab18b	98	85.294	ENSCSAG00000011749	RAB18	98	85.294	Chlorocebus_sabaeus
ENSPMAG00000005322	rab18b	98	85.294	ENSCANG00000035397	RAB18	98	85.294	Colobus_angolensis_palliatus
ENSPMAG00000005322	rab18b	98	84.804	ENSCGRG00001017519	Rab18	98	84.804	Cricetulus_griseus_chok1gshd
ENSPMAG00000005322	rab18b	98	84.804	ENSCGRG00000017201	Rab18	98	84.804	Cricetulus_griseus_crigri
ENSPMAG00000005322	rab18b	99	80.000	ENSCSEG00000016803	rab18b	91	89.385	Cynoglossus_semilaevis
ENSPMAG00000005322	rab18b	99	85.366	ENSDARG00000098344	rab18b	98	85.366	Danio_rerio
ENSPMAG00000005322	rab18b	52	90.826	ENSDNOG00000038845	-	72	90.826	Dasypus_novemcinctus
ENSPMAG00000005322	rab18b	98	85.294	ENSDNOG00000047713	RAB18	98	85.294	Dasypus_novemcinctus
ENSPMAG00000005322	rab18b	98	84.314	ENSDORG00000028596	-	98	84.314	Dipodomys_ordii
ENSPMAG00000005322	rab18b	82	83.529	ENSDORG00000029360	-	81	83.529	Dipodomys_ordii
ENSPMAG00000005322	rab18b	98	84.804	ENSEASG00005007164	RAB18	98	84.804	Equus_asinus_asinus
ENSPMAG00000005322	rab18b	98	84.804	ENSECAG00000017521	RAB18	86	84.804	Equus_caballus
ENSPMAG00000005322	rab18b	98	84.390	ENSELUG00000016450	rab18b	98	84.390	Esox_lucius
ENSPMAG00000005322	rab18b	98	84.804	ENSFCAG00000027161	RAB18	98	84.804	Felis_catus
ENSPMAG00000005322	rab18b	91	86.842	ENSFALG00000007160	RAB18	98	84.878	Ficedula_albicollis
ENSPMAG00000005322	rab18b	98	81.863	ENSFHEG00000020035	rab18b	98	81.863	Fundulus_heteroclitus
ENSPMAG00000005322	rab18b	99	79.512	ENSGMOG00000016608	rab18b	98	79.512	Gadus_morhua
ENSPMAG00000005322	rab18b	98	85.294	ENSGALG00000007435	RAB18	98	85.294	Gallus_gallus
ENSPMAG00000005322	rab18b	98	81.863	ENSGAFG00000008560	rab18b	98	81.863	Gambusia_affinis
ENSPMAG00000005322	rab18b	99	80.488	ENSGACG00000016395	rab18b	98	80.488	Gasterosteus_aculeatus
ENSPMAG00000005322	rab18b	98	85.294	ENSGGOG00000008086	RAB18	98	85.294	Gorilla_gorilla
ENSPMAG00000005322	rab18b	98	84.804	ENSHBUG00000003696	rab18b	98	84.804	Haplochromis_burtoni
ENSPMAG00000005322	rab18b	98	84.804	ENSHGLG00000004365	RAB18	98	84.804	Heterocephalus_glaber_female
ENSPMAG00000005322	rab18b	98	70.588	ENSHGLG00000007301	-	93	70.588	Heterocephalus_glaber_female
ENSPMAG00000005322	rab18b	98	84.804	ENSHGLG00100013089	-	98	84.804	Heterocephalus_glaber_male
ENSPMAG00000005322	rab18b	98	70.588	ENSHGLG00100009117	-	93	70.588	Heterocephalus_glaber_male
ENSPMAG00000005322	rab18b	98	82.927	ENSHCOG00000002217	rab18b	98	82.927	Hippocampus_comes
ENSPMAG00000005322	rab18b	98	84.314	ENSIPUG00000010859	rab18b	98	84.314	Ictalurus_punctatus
ENSPMAG00000005322	rab18b	98	84.804	ENSSTOG00000014560	-	98	84.804	Ictidomys_tridecemlineatus
ENSPMAG00000005322	rab18b	98	82.353	ENSKMAG00000007364	rab18b	98	82.353	Kryptolebias_marmoratus
ENSPMAG00000005322	rab18b	98	82.843	ENSLBEG00000019428	rab18b	98	82.843	Labrus_bergylta
ENSPMAG00000005322	rab18b	98	77.340	ENSLACG00000011256	rab18b	97	77.340	Latimeria_chalumnae
ENSPMAG00000005322	rab18b	91	87.368	ENSLAFG00000015582	RAB18	98	85.294	Loxodonta_africana
ENSPMAG00000005322	rab18b	98	85.294	ENSMFAG00000006430	RAB18	98	85.294	Macaca_fascicularis
ENSPMAG00000005322	rab18b	98	83.824	ENSMMUG00000046971	RAB18	73	83.824	Macaca_mulatta
ENSPMAG00000005322	rab18b	98	85.294	ENSMNEG00000038180	RAB18	98	85.294	Macaca_nemestrina
ENSPMAG00000005322	rab18b	98	85.294	ENSMLEG00000033595	RAB18	98	85.294	Mandrillus_leucophaeus
ENSPMAG00000005322	rab18b	98	81.951	ENSMAMG00000018445	rab18b	98	81.951	Mastacembelus_armatus
ENSPMAG00000005322	rab18b	98	84.804	ENSMZEG00005008244	rab18b	98	84.804	Maylandia_zebra
ENSPMAG00000005322	rab18b	98	74.510	ENSMAUG00000020698	-	97	74.510	Mesocricetus_auratus
ENSPMAG00000005322	rab18b	91	86.842	ENSMICG00000017280	RAB18	98	84.804	Microcebus_murinus
ENSPMAG00000005322	rab18b	98	84.804	ENSMOCG00000013044	Rab18	98	84.804	Microtus_ochrogaster
ENSPMAG00000005322	rab18b	98	70.233	ENSMMOG00000017849	rab18b	98	70.233	Mola_mola
ENSPMAG00000005322	rab18b	98	85.784	ENSMODG00000008253	RAB18	98	85.784	Monodelphis_domestica
ENSPMAG00000005322	rab18b	98	75.000	ENSMODG00000024936	-	98	75.000	Monodelphis_domestica
ENSPMAG00000005322	rab18b	99	82.039	ENSMALG00000005069	rab18b	98	82.039	Monopterus_albus
ENSPMAG00000005322	rab18b	98	84.804	MGP_CAROLIEiJ_G0021978	Rab18	98	84.804	Mus_caroli
ENSPMAG00000005322	rab18b	98	84.804	ENSMUSG00000073639	Rab18	98	84.804	Mus_musculus
ENSPMAG00000005322	rab18b	98	84.804	MGP_PahariEiJ_G0018716	Rab18	98	84.804	Mus_pahari
ENSPMAG00000005322	rab18b	98	84.804	MGP_SPRETEiJ_G0022894	Rab18	98	84.804	Mus_spretus
ENSPMAG00000005322	rab18b	98	84.804	ENSMPUG00000010592	RAB18	98	84.804	Mustela_putorius_furo
ENSPMAG00000005322	rab18b	98	73.932	ENSMLUG00000027295	RAB18	98	73.932	Myotis_lucifugus
ENSPMAG00000005322	rab18b	98	84.804	ENSNGAG00000001465	Rab18	98	84.804	Nannospalax_galili
ENSPMAG00000005322	rab18b	99	84.390	ENSNBRG00000008137	rab18b	98	84.390	Neolamprologus_brichardi
ENSPMAG00000005322	rab18b	98	85.294	ENSNLEG00000016970	RAB18	98	85.294	Nomascus_leucogenys
ENSPMAG00000005322	rab18b	98	84.804	ENSODEG00000004150	-	98	84.804	Octodon_degus
ENSPMAG00000005322	rab18b	99	84.390	ENSONIG00000018673	rab18b	98	84.390	Oreochromis_niloticus
ENSPMAG00000005322	rab18b	98	85.294	ENSOANG00000021391	RAB18	98	85.294	Ornithorhynchus_anatinus
ENSPMAG00000005322	rab18b	98	84.804	ENSOCUG00000022307	RAB18	98	84.804	Oryctolagus_cuniculus
ENSPMAG00000005322	rab18b	99	81.463	ENSORLG00000009609	rab18b	98	81.463	Oryzias_latipes
ENSPMAG00000005322	rab18b	99	81.463	ENSORLG00020011590	rab18b	98	81.463	Oryzias_latipes_hni
ENSPMAG00000005322	rab18b	99	81.463	ENSORLG00015007182	rab18b	98	81.463	Oryzias_latipes_hsok
ENSPMAG00000005322	rab18b	98	80.882	ENSOMEG00000007546	rab18b	98	80.882	Oryzias_melastigma
ENSPMAG00000005322	rab18b	91	86.842	ENSOGAG00000028015	RAB18	98	84.804	Otolemur_garnettii
ENSPMAG00000005322	rab18b	98	85.294	ENSOARG00000016208	RAB18	98	85.294	Ovis_aries
ENSPMAG00000005322	rab18b	98	85.294	ENSPPAG00000041625	RAB18	98	85.294	Pan_paniscus
ENSPMAG00000005322	rab18b	98	84.804	ENSPPRG00000010314	RAB18	98	84.804	Panthera_pardus
ENSPMAG00000005322	rab18b	98	84.804	ENSPTIG00000011667	RAB18	98	84.804	Panthera_tigris_altaica
ENSPMAG00000005322	rab18b	98	85.294	ENSPTRG00000002384	RAB18	98	85.294	Pan_troglodytes
ENSPMAG00000005322	rab18b	98	85.294	ENSPANG00000023005	RAB18	98	85.294	Papio_anubis
ENSPMAG00000005322	rab18b	98	85.294	ENSPCIG00000028705	-	86	85.294	Phascolarctos_cinereus
ENSPMAG00000005322	rab18b	98	81.863	ENSPFOG00000013491	rab18b	98	81.863	Poecilia_formosa
ENSPMAG00000005322	rab18b	98	81.863	ENSPLAG00000019136	rab18b	98	81.863	Poecilia_latipinna
ENSPMAG00000005322	rab18b	98	81.863	ENSPMEG00000008223	rab18b	98	81.863	Poecilia_mexicana
ENSPMAG00000005322	rab18b	98	85.294	ENSPPYG00000002172	RAB18	98	85.294	Pongo_abelii
ENSPMAG00000005322	rab18b	91	86.842	ENSPCOG00000018906	RAB18	98	84.804	Propithecus_coquereli
ENSPMAG00000005322	rab18b	98	84.804	ENSPNYG00000001751	rab18b	98	84.804	Pundamilia_nyererei
ENSPMAG00000005322	rab18b	98	85.294	ENSPNAG00000002404	rab18b	98	85.294	Pygocentrus_nattereri
ENSPMAG00000005322	rab18b	98	84.804	ENSRNOG00000018972	Rab18	98	84.804	Rattus_norvegicus
ENSPMAG00000005322	rab18b	98	84.804	ENSRBIG00000035948	RAB18	98	84.804	Rhinopithecus_bieti
ENSPMAG00000005322	rab18b	98	85.294	ENSRROG00000040563	RAB18	98	85.294	Rhinopithecus_roxellana
ENSPMAG00000005322	rab18b	98	85.294	ENSSHAG00000007613	RAB18	98	85.294	Sarcophilus_harrisii
ENSPMAG00000005322	rab18b	98	83.824	ENSSMAG00000011814	rab18b	98	83.824	Scophthalmus_maximus
ENSPMAG00000005322	rab18b	98	85.294	ENSSDUG00000005960	rab18b	98	85.294	Seriola_dumerili
ENSPMAG00000005322	rab18b	98	85.294	ENSSLDG00000006014	rab18b	98	85.294	Seriola_lalandi_dorsalis
ENSPMAG00000005322	rab18b	98	84.804	ENSSPAG00000020875	rab18b	98	84.804	Stegastes_partitus
ENSPMAG00000005322	rab18b	98	85.294	ENSSSCG00000028655	RAB18	98	85.294	Sus_scrofa
ENSPMAG00000005322	rab18b	91	76.037	ENSTGUG00000001105	-	98	75.000	Taeniopygia_guttata
ENSPMAG00000005322	rab18b	98	81.373	ENSTRUG00000004283	rab18b	98	82.927	Takifugu_rubripes
ENSPMAG00000005322	rab18b	98	81.373	ENSTNIG00000007882	rab18b	98	81.373	Tetraodon_nigroviridis
ENSPMAG00000005322	rab18b	98	84.804	ENSVVUG00000001705	RAB18	98	84.804	Vulpes_vulpes
ENSPMAG00000005322	rab18b	98	80.392	ENSXMAG00000006945	rab18b	98	82.439	Xiphophorus_maculatus