EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005337 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 41817 bases
Position: chrGL477234:1605-43421
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006008	ResIII	PF04851.15	1.1e-10	1	1
ENSPMAP00000006008	BRK	PF07533.16	4.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006036	-	4788	-	ENSPMAP00000006008	1596 (aa)	-	S4RLC2

Gene Model

Click here to download ENSPMAG00000005337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005337	-	94	72.548	ENSG00000080503	SMARCA2	99	100.000	Homo_sapiens
ENSPMAG00000005337	-	97	70.038	ENSAPOG00000002641	SMARCA2	99	68.151	Acanthochromis_polyacanthus
ENSPMAG00000005337	-	90	70.652	ENSAMEG00000012325	SMARCA2	93	78.583	Ailuropoda_melanoleuca
ENSPMAG00000005337	-	98	68.438	ENSACIG00000015607	SMARCA2	97	68.860	Amphilophus_citrinellus
ENSPMAG00000005337	-	97	69.557	ENSAOCG00000009647	-	95	70.618	Amphiprion_ocellaris
ENSPMAG00000005337	-	97	69.847	ENSAPEG00000007646	SMARCA2	99	69.085	Amphiprion_percula
ENSPMAG00000005337	-	97	70.191	ENSATEG00000006916	SMARCA2	94	70.450	Anabas_testudineus
ENSPMAG00000005337	-	89	71.053	ENSAPLG00000013873	SMARCA2	93	70.861	Anas_platyrhynchos
ENSPMAG00000005337	-	94	72.793	ENSACAG00000002423	SMARCA2	94	73.003	Anolis_carolinensis
ENSPMAG00000005337	-	94	72.087	ENSANAG00000026498	SMARCA2	98	71.779	Aotus_nancymaae
ENSPMAG00000005337	-	79	75.554	ENSACLG00000004248	SMARCA2	94	70.192	Astatotilapia_calliptera
ENSPMAG00000005337	-	97	70.540	ENSAMXG00000012404	smarca2	95	70.791	Astyanax_mexicanus
ENSPMAG00000005337	-	94	72.350	ENSBTAG00000007494	SMARCA2	94	72.617	Bos_taurus
ENSPMAG00000005337	-	94	72.805	ENSCJAG00000010710	SMARCA2	99	71.785	Callithrix_jacchus
ENSPMAG00000005337	-	94	72.614	ENSCAFG00000002013	SMARCA2	94	73.248	Canis_familiaris
ENSPMAG00000005337	-	76	78.061	ENSCAFG00020026802	SMARCA2	93	78.200	Canis_lupus_dingo
ENSPMAG00000005337	-	94	72.523	ENSCHIG00000025863	SMARCA2	94	72.721	Capra_hircus
ENSPMAG00000005337	-	94	69.454	ENSTSYG00000003858	SMARCA2	95	72.535	Carlito_syrichta
ENSPMAG00000005337	-	80	73.231	ENSCAPG00000002890	SMARCA2	95	71.125	Cavia_aperea
ENSPMAG00000005337	-	80	78.193	ENSCPOG00000005475	SMARCA2	94	73.389	Cavia_porcellus
ENSPMAG00000005337	-	94	72.475	ENSCCAG00000030636	SMARCA2	98	72.052	Cebus_capucinus
ENSPMAG00000005337	-	94	71.971	ENSCATG00000031470	SMARCA2	99	71.409	Cercocebus_atys
ENSPMAG00000005337	-	80	77.752	ENSCLAG00000014484	SMARCA2	94	73.325	Chinchilla_lanigera
ENSPMAG00000005337	-	93	72.770	ENSCSAG00000008650	SMARCA2	99	72.992	Chlorocebus_sabaeus
ENSPMAG00000005337	-	68	79.197	ENSCHOG00000004316	SMARCA2	85	73.432	Choloepus_hoffmanni
ENSPMAG00000005337	-	94	73.009	ENSCPBG00000025463	SMARCA2	94	73.389	Chrysemys_picta_bellii
ENSPMAG00000005337	-	94	72.548	ENSCANG00000039597	SMARCA2	98	72.548	Colobus_angolensis_palliatus
ENSPMAG00000005337	-	75	74.355	ENSCGRG00001002323	Smarca2	76	73.740	Cricetulus_griseus_chok1gshd
ENSPMAG00000005337	-	97	66.308	ENSCSEG00000019311	SMARCA2	94	67.562	Cynoglossus_semilaevis
ENSPMAG00000005337	-	67	76.026	ENSCVAG00000016571	SMARCA2	75	75.580	Cyprinodon_variegatus
ENSPMAG00000005337	-	96	70.463	ENSDARG00000008904	smarca2	94	70.218	Danio_rerio
ENSPMAG00000005337	-	94	72.567	ENSDNOG00000006402	SMARCA2	94	73.193	Dasypus_novemcinctus
ENSPMAG00000005337	-	80	76.744	ENSDORG00000014832	Smarca2	95	72.431	Dipodomys_ordii
ENSPMAG00000005337	-	80	58.846	FBgn0000212	brm	88	51.761	Drosophila_melanogaster
ENSPMAG00000005337	-	89	60.041	ENSEBUG00000002449	-	94	61.951	Eptatretus_burgeri
ENSPMAG00000005337	-	97	72.233	ENSEBUG00000011442	-	97	70.736	Eptatretus_burgeri
ENSPMAG00000005337	-	94	72.482	ENSEASG00005010312	SMARCA2	94	72.634	Equus_asinus_asinus
ENSPMAG00000005337	-	58	90.909	ENSEEUG00000015540	-	64	90.909	Erinaceus_europaeus
ENSPMAG00000005337	-	94	71.560	ENSELUG00000010318	smarca2	99	70.842	Esox_lucius
ENSPMAG00000005337	-	94	72.416	ENSFCAG00000001568	SMARCA2	94	73.183	Felis_catus
ENSPMAG00000005337	-	94	72.900	ENSFALG00000010416	SMARCA2	94	74.723	Ficedula_albicollis
ENSPMAG00000005337	-	90	76.630	ENSFDAG00000010502	SMARCA2	89	78.389	Fukomys_damarensis
ENSPMAG00000005337	-	97	70.248	ENSFHEG00000021250	SMARCA2	95	71.046	Fundulus_heteroclitus
ENSPMAG00000005337	-	97	68.344	ENSGMOG00000014229	SMARCA2	95	68.582	Gadus_morhua
ENSPMAG00000005337	-	94	73.105	ENSGALG00000010164	SMARCA2	94	73.454	Gallus_gallus
ENSPMAG00000005337	-	97	65.563	ENSGAFG00000001164	SMARCA2	95	66.070	Gambusia_affinis
ENSPMAG00000005337	-	97	69.105	ENSGACG00000014488	SMARCA2	96	69.501	Gasterosteus_aculeatus
ENSPMAG00000005337	-	94	72.626	ENSGAGG00000024412	SMARCA2	94	73.013	Gopherus_agassizii
ENSPMAG00000005337	-	86	79.114	ENSGGOG00000000513	SMARCA2	93	78.438	Gorilla_gorilla
ENSPMAG00000005337	-	97	69.873	ENSHBUG00000006691	SMARCA2	95	70.562	Haplochromis_burtoni
ENSPMAG00000005337	-	94	72.482	ENSHGLG00000005215	SMARCA2	94	72.645	Heterocephalus_glaber_female
ENSPMAG00000005337	-	94	72.314	ENSHGLG00100010496	SMARCA2	94	72.505	Heterocephalus_glaber_male
ENSPMAG00000005337	-	90	65.730	ENSHCOG00000015348	-	90	76.321	Hippocampus_comes
ENSPMAG00000005337	-	97	70.682	ENSIPUG00000011060	smarca2	95	70.754	Ictalurus_punctatus
ENSPMAG00000005337	-	94	72.307	ENSSTOG00000006812	SMARCA2	95	72.674	Ictidomys_tridecemlineatus
ENSPMAG00000005337	-	80	76.845	ENSJJAG00000010867	Smarca2	94	73.174	Jaculus_jaculus
ENSPMAG00000005337	-	97	69.148	ENSKMAG00000015844	-	95	70.417	Kryptolebias_marmoratus
ENSPMAG00000005337	-	94	71.875	ENSLOCG00000011499	smarca2	94	71.628	Lepisosteus_oculatus
ENSPMAG00000005337	-	94	71.456	ENSLAFG00000014061	SMARCA2	94	72.290	Loxodonta_africana
ENSPMAG00000005337	-	79	77.287	ENSMFAG00000003814	SMARCA2	98	71.847	Macaca_fascicularis
ENSPMAG00000005337	-	94	72.482	ENSMMUG00000015279	SMARCA2	94	73.183	Macaca_mulatta
ENSPMAG00000005337	-	78	78.268	ENSMNEG00000041069	SMARCA2	99	72.090	Macaca_nemestrina
ENSPMAG00000005337	-	87	79.214	ENSMLEG00000027418	SMARCA2	80	79.080	Mandrillus_leucophaeus
ENSPMAG00000005337	-	97	69.467	ENSMAMG00000003056	SMARCA2	99	69.069	Mastacembelus_armatus
ENSPMAG00000005337	-	97	70.006	ENSMZEG00005020709	SMARCA2	95	70.817	Maylandia_zebra
ENSPMAG00000005337	-	76	62.594	ENSMGAG00000005160	-	100	62.846	Meleagris_gallopavo
ENSPMAG00000005337	-	94	72.727	ENSMICG00000005162	SMARCA2	99	72.123	Microcebus_murinus
ENSPMAG00000005337	-	78	78.010	ENSMOCG00000001611	Smarca2	94	72.108	Microtus_ochrogaster
ENSPMAG00000005337	-	96	70.181	ENSMMOG00000014196	SMARCA2	96	69.716	Mola_mola
ENSPMAG00000005337	-	94	72.418	ENSMODG00000003578	SMARCA2	94	73.552	Monodelphis_domestica
ENSPMAG00000005337	-	78	74.021	ENSMALG00000009611	SMARCA2	94	69.236	Monopterus_albus
ENSPMAG00000005337	-	93	75.976	MGP_CAROLIEiJ_G0022841	Smarca2	94	72.564	Mus_caroli
ENSPMAG00000005337	-	80	76.726	ENSMUSG00000024921	Smarca2	99	100.000	Mus_musculus
ENSPMAG00000005337	-	78	78.348	MGP_PahariEiJ_G0014334	Smarca2	94	71.793	Mus_pahari
ENSPMAG00000005337	-	80	76.804	MGP_SPRETEiJ_G0023759	Smarca2	85	93.939	Mus_spretus
ENSPMAG00000005337	-	77	78.205	ENSMPUG00000005171	SMARCA2	88	78.761	Mustela_putorius_furo
ENSPMAG00000005337	-	94	68.738	ENSMLUG00000002342	SMARCA2	94	68.983	Myotis_lucifugus
ENSPMAG00000005337	-	94	70.893	ENSNGAG00000000108	Smarca2	94	71.401	Nannospalax_galili
ENSPMAG00000005337	-	82	68.829	ENSNBRG00000017998	SMARCA2	89	86.653	Neolamprologus_brichardi
ENSPMAG00000005337	-	77	77.913	ENSNLEG00000008575	SMARCA2	94	68.313	Nomascus_leucogenys
ENSPMAG00000005337	-	93	67.729	ENSMEUG00000009812	SMARCA2	93	68.085	Notamacropus_eugenii
ENSPMAG00000005337	-	77	73.625	ENSOPRG00000013474	SMARCA2	94	69.221	Ochotona_princeps
ENSPMAG00000005337	-	78	78.348	ENSODEG00000005452	SMARCA2	94	72.080	Octodon_degus
ENSPMAG00000005337	-	97	70.245	ENSONIG00000014163	SMARCA2	95	70.013	Oreochromis_niloticus
ENSPMAG00000005337	-	77	78.641	ENSOCUG00000006320	SMARCA2	94	71.827	Oryctolagus_cuniculus
ENSPMAG00000005337	-	97	69.682	ENSORLG00000020820	SMARCA2	99	66.644	Oryzias_latipes
ENSPMAG00000005337	-	97	69.853	ENSORLG00015006289	SMARCA2	97	78.729	Oryzias_latipes_hsok
ENSPMAG00000005337	-	97	70.127	ENSOMEG00000009736	-	97	69.117	Oryzias_melastigma
ENSPMAG00000005337	-	94	70.836	ENSOGAG00000017053	SMARCA2	94	71.891	Otolemur_garnettii
ENSPMAG00000005337	-	94	71.551	ENSOARG00000013265	SMARCA2	94	71.885	Ovis_aries
ENSPMAG00000005337	-	87	79.392	ENSPPAG00000038717	SMARCA2	94	68.211	Pan_paniscus
ENSPMAG00000005337	-	94	72.482	ENSPPRG00000001879	SMARCA2	94	73.248	Panthera_pardus
ENSPMAG00000005337	-	94	72.637	ENSPTRG00000051168	SMARCA2	98	72.101	Pan_troglodytes
ENSPMAG00000005337	-	79	73.639	ENSPANG00000025121	SMARCA2	94	69.691	Papio_anubis
ENSPMAG00000005337	-	97	70.823	ENSPKIG00000018469	-	94	70.423	Paramormyrops_kingsleyae
ENSPMAG00000005337	-	94	72.930	ENSPSIG00000006284	SMARCA2	94	73.312	Pelodiscus_sinensis
ENSPMAG00000005337	-	95	67.731	ENSPMGG00000013696	-	94	67.253	Periophthalmus_magnuspinnatus
ENSPMAG00000005337	-	78	77.706	ENSPEMG00000019821	Smarca2	94	71.997	Peromyscus_maniculatus_bairdii
ENSPMAG00000005337	-	94	72.353	ENSPCIG00000015658	SMARCA2	94	73.552	Phascolarctos_cinereus
ENSPMAG00000005337	-	97	70.057	ENSPFOG00000001856	SMARCA2	95	70.727	Poecilia_formosa
ENSPMAG00000005337	-	97	69.415	ENSPLAG00000017829	SMARCA2	92	70.310	Poecilia_latipinna
ENSPMAG00000005337	-	97	69.313	ENSPMEG00000001815	-	95	70.101	Poecilia_mexicana
ENSPMAG00000005337	-	97	69.289	ENSPREG00000013800	SMARCA2	95	70.183	Poecilia_reticulata
ENSPMAG00000005337	-	94	72.021	ENSPPYG00000019258	SMARCA2	94	72.733	Pongo_abelii
ENSPMAG00000005337	-	71	89.706	ENSPCAG00000016969	SMARCA2	71	89.706	Procavia_capensis
ENSPMAG00000005337	-	94	70.588	ENSPCOG00000025709	SMARCA2	99	70.342	Propithecus_coquereli
ENSPMAG00000005337	-	87	85.227	ENSPVAG00000000901	SMARCA2	88	87.805	Pteropus_vampyrus
ENSPMAG00000005337	-	97	68.133	ENSPNYG00000004533	SMARCA2	94	68.566	Pundamilia_nyererei
ENSPMAG00000005337	-	97	69.981	ENSPNAG00000014635	smarca2	94	71.365	Pygocentrus_nattereri
ENSPMAG00000005337	-	80	75.883	ENSRNOG00000011931	Smarca2	94	71.883	Rattus_norvegicus
ENSPMAG00000005337	-	94	68.861	ENSRBIG00000038618	SMARCA2	99	70.114	Rhinopithecus_bieti
ENSPMAG00000005337	-	94	72.189	ENSRROG00000019271	SMARCA2	99	71.748	Rhinopithecus_roxellana
ENSPMAG00000005337	-	89	78.268	ENSSBOG00000034827	SMARCA2	90	78.686	Saimiri_boliviensis_boliviensis
ENSPMAG00000005337	-	95	71.909	ENSSHAG00000007884	SMARCA2	98	71.570	Sarcophilus_harrisii
ENSPMAG00000005337	-	91	70.904	ENSSFOG00015014870	SMARCA2	97	71.126	Scleropages_formosus
ENSPMAG00000005337	-	97	69.710	ENSSMAG00000013707	SMARCA2	95	70.741	Scophthalmus_maximus
ENSPMAG00000005337	-	97	69.436	ENSSDUG00000008852	-	95	69.073	Seriola_dumerili
ENSPMAG00000005337	-	97	69.392	ENSSLDG00000025449	SMARCA2	94	69.172	Seriola_lalandi_dorsalis
ENSPMAG00000005337	-	84	86.154	ENSSARG00000007888	SMARCA2	88	87.805	Sorex_araneus
ENSPMAG00000005337	-	95	69.889	ENSSPUG00000001629	SMARCA2	92	71.419	Sphenodon_punctatus
ENSPMAG00000005337	-	97	69.987	ENSSPAG00000020091	-	95	70.794	Stegastes_partitus
ENSPMAG00000005337	-	94	72.087	ENSSSCG00000005232	SMARCA2	94	72.873	Sus_scrofa
ENSPMAG00000005337	-	94	72.900	ENSTGUG00000005460	SMARCA2	94	73.235	Taeniopygia_guttata
ENSPMAG00000005337	-	97	69.483	ENSTRUG00000015619	SMARCA2	95	70.611	Takifugu_rubripes
ENSPMAG00000005337	-	63	88.889	ENSTBEG00000008767	SMARCA2	69	88.889	Tupaia_belangeri
ENSPMAG00000005337	-	94	71.587	ENSTTRG00000002033	SMARCA2	94	71.949	Tursiops_truncatus
ENSPMAG00000005337	-	89	72.254	ENSUAMG00000024701	SMARCA2	99	72.454	Ursus_americanus
ENSPMAG00000005337	-	87	70.467	ENSVPAG00000001204	SMARCA2	94	71.383	Vicugna_pacos
ENSPMAG00000005337	-	76	77.934	ENSVVUG00000004598	SMARCA2	95	78.073	Vulpes_vulpes
ENSPMAG00000005337	-	95	69.845	ENSXETG00000015299	smarca2	94	69.672	Xenopus_tropicalis
ENSPMAG00000005337	-	91	65.629	ENSXCOG00000011073	SMARCA2	99	67.840	Xiphophorus_couchianus
ENSPMAG00000005337	-	97	68.434	ENSXMAG00000015611	SMARCA2	95	69.905	Xiphophorus_maculatus