EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005372 (Gene tree)
Gene ID: -
Gene Symbol: shq1
Alias: -
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 10632 bases
Position: chrGL476493:412068-422699
Accession: ZDB-GENE-070112-1412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005928	SHQ1	PF04925.15	6e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005956	-	1503	-	ENSPMAP00000005928	441 (aa)	-	S4RL42

Gene Model

Click here to download ENSPMAG00000005372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005372's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005372	shq1	99	55.310	ENSG00000144736	SHQ1	100	76.000	Homo_sapiens
ENSPMAG00000005372	shq1	98	57.534	ENSAPOG00000000397	shq1	70	56.621	Acanthochromis_polyacanthus
ENSPMAG00000005372	shq1	98	56.659	ENSAMEG00000015140	SHQ1	76	56.885	Ailuropoda_melanoleuca
ENSPMAG00000005372	shq1	99	56.009	ENSACIG00000021249	shq1	72	56.689	Amphilophus_citrinellus
ENSPMAG00000005372	shq1	98	57.306	ENSAOCG00000023311	shq1	70	56.393	Amphiprion_ocellaris
ENSPMAG00000005372	shq1	98	57.534	ENSAPEG00000021686	shq1	70	56.621	Amphiprion_percula
ENSPMAG00000005372	shq1	98	58.486	ENSATEG00000008475	shq1	71	57.798	Anabas_testudineus
ENSPMAG00000005372	shq1	98	53.725	ENSAPLG00000013926	SHQ1	86	54.260	Anas_platyrhynchos
ENSPMAG00000005372	shq1	96	55.116	ENSACAG00000014809	SHQ1	64	55.530	Anolis_carolinensis
ENSPMAG00000005372	shq1	99	41.230	ENSANAG00000030500	-	74	41.230	Aotus_nancymaae
ENSPMAG00000005372	shq1	99	55.531	ENSANAG00000029241	SHQ1	76	54.204	Aotus_nancymaae
ENSPMAG00000005372	shq1	99	57.370	ENSACLG00000023077	shq1	73	54.894	Astatotilapia_calliptera
ENSPMAG00000005372	shq1	97	54.273	ENSAMXG00000043822	shq1	74	55.378	Astyanax_mexicanus
ENSPMAG00000005372	shq1	100	56.388	ENSBTAG00000005436	SHQ1	77	56.167	Bos_taurus
ENSPMAG00000005372	shq1	95	31.034	WBGene00021655	Y48A5A.1	95	31.050	Caenorhabditis_elegans
ENSPMAG00000005372	shq1	99	54.867	ENSCJAG00000015131	SHQ1	76	53.540	Callithrix_jacchus
ENSPMAG00000005372	shq1	89	59.102	ENSCAFG00000006434	SHQ1	76	56.823	Canis_familiaris
ENSPMAG00000005372	shq1	89	59.102	ENSCAFG00020016743	SHQ1	76	56.823	Canis_lupus_dingo
ENSPMAG00000005372	shq1	100	56.703	ENSCHIG00000012271	SHQ1	69	56.484	Capra_hircus
ENSPMAG00000005372	shq1	99	53.348	ENSTSYG00000014439	SHQ1	76	53.571	Carlito_syrichta
ENSPMAG00000005372	shq1	88	47.970	ENSCAPG00000009343	SHQ1	64	56.627	Cavia_aperea
ENSPMAG00000005372	shq1	99	55.111	ENSCPOG00000011443	SHQ1	75	54.688	Cavia_porcellus
ENSPMAG00000005372	shq1	99	47.098	ENSCCAG00000027080	SHQ1	68	77.083	Cebus_capucinus
ENSPMAG00000005372	shq1	99	43.409	ENSCCAG00000036087	-	74	41.892	Cebus_capucinus
ENSPMAG00000005372	shq1	99	55.507	ENSCATG00000041238	SHQ1	76	53.744	Cercocebus_atys
ENSPMAG00000005372	shq1	99	55.234	ENSCLAG00000004206	SHQ1	76	55.011	Chinchilla_lanigera
ENSPMAG00000005372	shq1	79	51.233	ENSCSAG00000011514	SHQ1	72	49.041	Chlorocebus_sabaeus
ENSPMAG00000005372	shq1	65	71.667	ENSCHOG00000003273	-	84	71.667	Choloepus_hoffmanni
ENSPMAG00000005372	shq1	99	54.626	ENSCPBG00000006441	SHQ1	72	55.286	Chrysemys_picta_bellii
ENSPMAG00000005372	shq1	96	39.202	ENSCING00000008013	-	93	38.235	Ciona_intestinalis
ENSPMAG00000005372	shq1	93	39.709	ENSCSAVG00000002332	-	98	38.991	Ciona_savignyi
ENSPMAG00000005372	shq1	99	55.778	ENSCANG00000039295	SHQ1	77	55.111	Colobus_angolensis_palliatus
ENSPMAG00000005372	shq1	99	56.376	ENSCGRG00001012583	Shq1	78	56.152	Cricetulus_griseus_chok1gshd
ENSPMAG00000005372	shq1	99	56.376	ENSCGRG00000009849	Shq1	78	56.152	Cricetulus_griseus_crigri
ENSPMAG00000005372	shq1	94	59.145	ENSCSEG00000007829	shq1	69	57.931	Cynoglossus_semilaevis
ENSPMAG00000005372	shq1	98	56.916	ENSCVAG00000020049	shq1	74	56.463	Cyprinodon_variegatus
ENSPMAG00000005372	shq1	98	55.936	ENSDARG00000058522	shq1	73	55.708	Danio_rerio
ENSPMAG00000005372	shq1	99	56.984	ENSDNOG00000033937	SHQ1	76	56.541	Dasypus_novemcinctus
ENSPMAG00000005372	shq1	99	51.454	ENSETEG00000005766	SHQ1	77	51.454	Echinops_telfairi
ENSPMAG00000005372	shq1	80	49.582	ENSEBUG00000005445	shq1	77	48.864	Eptatretus_burgeri
ENSPMAG00000005372	shq1	99	55.432	ENSEASG00005002237	SHQ1	76	55.654	Equus_asinus_asinus
ENSPMAG00000005372	shq1	99	55.654	ENSECAG00000015673	SHQ1	75	55.876	Equus_caballus
ENSPMAG00000005372	shq1	99	55.211	ENSEEUG00000010568	SHQ1	76	54.989	Erinaceus_europaeus
ENSPMAG00000005372	shq1	93	57.895	ENSELUG00000003476	shq1	81	56.122	Esox_lucius
ENSPMAG00000005372	shq1	99	56.823	ENSFCAG00000012781	SHQ1	77	56.600	Felis_catus
ENSPMAG00000005372	shq1	94	55.634	ENSFALG00000013428	SHQ1	72	54.688	Ficedula_albicollis
ENSPMAG00000005372	shq1	99	55.432	ENSFDAG00000005595	SHQ1	68	54.989	Fukomys_damarensis
ENSPMAG00000005372	shq1	94	59.712	ENSFHEG00000017552	shq1	73	57.991	Fundulus_heteroclitus
ENSPMAG00000005372	shq1	89	60.152	ENSGMOG00000007350	shq1	99	60.152	Gadus_morhua
ENSPMAG00000005372	shq1	99	54.889	ENSGALG00000007798	SHQ1	72	55.381	Gallus_gallus
ENSPMAG00000005372	shq1	89	60.152	ENSGACG00000011797	shq1	99	59.391	Gasterosteus_aculeatus
ENSPMAG00000005372	shq1	99	55.088	ENSGGOG00000034818	SHQ1	76	53.319	Gorilla_gorilla
ENSPMAG00000005372	shq1	99	58.050	ENSHBUG00000010857	shq1	72	58.503	Haplochromis_burtoni
ENSPMAG00000005372	shq1	99	54.545	ENSHGLG00000003637	SHQ1	68	54.102	Heterocephalus_glaber_female
ENSPMAG00000005372	shq1	99	54.545	ENSHGLG00100011957	SHQ1	69	54.102	Heterocephalus_glaber_male
ENSPMAG00000005372	shq1	100	54.464	ENSHCOG00000010799	shq1	75	53.659	Hippocampus_comes
ENSPMAG00000005372	shq1	98	57.534	ENSIPUG00000001247	shq1	74	57.306	Ictalurus_punctatus
ENSPMAG00000005372	shq1	99	57.080	ENSSTOG00000010043	SHQ1	80	56.416	Ictidomys_tridecemlineatus
ENSPMAG00000005372	shq1	98	56.854	ENSJJAG00000017611	Shq1	77	56.854	Jaculus_jaculus
ENSPMAG00000005372	shq1	94	59.091	ENSKMAG00000004457	shq1	73	56.881	Kryptolebias_marmoratus
ENSPMAG00000005372	shq1	98	59.729	ENSLACG00000014243	SHQ1	65	59.729	Latimeria_chalumnae
ENSPMAG00000005372	shq1	93	58.275	ENSLOCG00000009970	shq1	76	56.222	Lepisosteus_oculatus
ENSPMAG00000005372	shq1	93	41.205	ENSMFAG00000037396	-	74	39.408	Macaca_fascicularis
ENSPMAG00000005372	shq1	99	55.727	ENSMFAG00000039148	SHQ1	76	53.965	Macaca_fascicularis
ENSPMAG00000005372	shq1	88	52.709	ENSMMUG00000009571	SHQ1	71	50.739	Macaca_mulatta
ENSPMAG00000005372	shq1	99	41.043	ENSMMUG00000021761	-	74	39.408	Macaca_mulatta
ENSPMAG00000005372	shq1	99	55.727	ENSMNEG00000032667	SHQ1	76	53.965	Macaca_nemestrina
ENSPMAG00000005372	shq1	99	55.947	ENSMLEG00000038493	SHQ1	76	54.185	Mandrillus_leucophaeus
ENSPMAG00000005372	shq1	94	58.993	ENSMAMG00000023432	shq1	68	57.047	Mastacembelus_armatus
ENSPMAG00000005372	shq1	99	57.370	ENSMZEG00005008649	shq1	72	58.503	Maylandia_zebra
ENSPMAG00000005372	shq1	99	54.545	ENSMGAG00000009640	SHQ1	73	53.571	Meleagris_gallopavo
ENSPMAG00000005372	shq1	99	56.376	ENSMAUG00000022030	Shq1	78	56.152	Mesocricetus_auratus
ENSPMAG00000005372	shq1	99	55.752	ENSMICG00000009224	SHQ1	75	55.088	Microcebus_murinus
ENSPMAG00000005372	shq1	99	56.152	ENSMOCG00000017836	Shq1	78	55.928	Microtus_ochrogaster
ENSPMAG00000005372	shq1	94	55.609	ENSMMOG00000010569	shq1	73	55.708	Mola_mola
ENSPMAG00000005372	shq1	98	53.778	ENSMODG00000003926	SHQ1	78	52.679	Monodelphis_domestica
ENSPMAG00000005372	shq1	93	59.759	ENSMALG00000008870	shq1	73	58.277	Monopterus_albus
ENSPMAG00000005372	shq1	98	57.014	MGP_CAROLIEiJ_G0028689	Shq1	76	56.787	Mus_caroli
ENSPMAG00000005372	shq1	98	56.787	ENSMUSG00000035378	Shq1	76	56.561	Mus_musculus
ENSPMAG00000005372	shq1	99	56.823	MGP_PahariEiJ_G0022440	Shq1	77	56.600	Mus_pahari
ENSPMAG00000005372	shq1	98	56.787	MGP_SPRETEiJ_G0029717	Shq1	76	56.561	Mus_spretus
ENSPMAG00000005372	shq1	99	56.376	ENSMPUG00000017006	SHQ1	75	56.376	Mustela_putorius_furo
ENSPMAG00000005372	shq1	89	52.868	ENSMLUG00000013539	SHQ1	75	53.598	Myotis_lucifugus
ENSPMAG00000005372	shq1	99	52.620	ENSNGAG00000023317	Shq1	77	52.262	Nannospalax_galili
ENSPMAG00000005372	shq1	79	54.261	ENSNBRG00000024004	shq1	67	54.830	Neolamprologus_brichardi
ENSPMAG00000005372	shq1	99	55.973	ENSNLEG00000002731	SHQ1	76	54.425	Nomascus_leucogenys
ENSPMAG00000005372	shq1	85	56.075	ENSMEUG00000009350	-	71	56.075	Notamacropus_eugenii
ENSPMAG00000005372	shq1	60	66.102	ENSOPRG00000013963	-	74	66.102	Ochotona_princeps
ENSPMAG00000005372	shq1	99	56.071	ENSODEG00000009192	SHQ1	80	55.850	Octodon_degus
ENSPMAG00000005372	shq1	99	58.050	ENSONIG00000020264	shq1	72	58.503	Oreochromis_niloticus
ENSPMAG00000005372	shq1	99	56.098	ENSOCUG00000016695	SHQ1	75	56.541	Oryctolagus_cuniculus
ENSPMAG00000005372	shq1	94	57.933	ENSORLG00000023538	shq1	79	56.009	Oryzias_latipes
ENSPMAG00000005372	shq1	94	59.375	ENSORLG00020003697	shq1	78	56.689	Oryzias_latipes_hni
ENSPMAG00000005372	shq1	94	59.615	ENSORLG00015021040	shq1	79	56.982	Oryzias_latipes_hsok
ENSPMAG00000005372	shq1	94	58.273	ENSOMEG00000001225	shq1	77	57.339	Oryzias_melastigma
ENSPMAG00000005372	shq1	99	54.945	ENSOGAG00000003898	SHQ1	77	54.505	Otolemur_garnettii
ENSPMAG00000005372	shq1	100	55.022	ENSOARG00000009547	SHQ1	77	55.870	Ovis_aries
ENSPMAG00000005372	shq1	93	40.909	ENSPPAG00000043263	-	74	39.278	Pan_paniscus
ENSPMAG00000005372	shq1	99	55.531	ENSPPAG00000027714	SHQ1	76	53.761	Pan_paniscus
ENSPMAG00000005372	shq1	99	56.823	ENSPPRG00000004769	SHQ1	76	56.600	Panthera_pardus
ENSPMAG00000005372	shq1	99	54.525	ENSPTIG00000011478	SHQ1	76	54.299	Panthera_tigris_altaica
ENSPMAG00000005372	shq1	99	55.531	ENSPTRG00000015106	SHQ1	76	53.761	Pan_troglodytes
ENSPMAG00000005372	shq1	93	40.909	ENSPTRG00000048303	-	74	39.052	Pan_troglodytes
ENSPMAG00000005372	shq1	99	54.185	ENSPANG00000002881	SHQ1	76	54.626	Papio_anubis
ENSPMAG00000005372	shq1	96	60.280	ENSPKIG00000021517	shq1	74	58.933	Paramormyrops_kingsleyae
ENSPMAG00000005372	shq1	98	55.079	ENSPSIG00000005536	SHQ1	71	56.208	Pelodiscus_sinensis
ENSPMAG00000005372	shq1	99	53.864	ENSPMGG00000008838	shq1	73	54.091	Periophthalmus_magnuspinnatus
ENSPMAG00000005372	shq1	89	59.102	ENSPEMG00000000251	Shq1	77	56.600	Peromyscus_maniculatus_bairdii
ENSPMAG00000005372	shq1	94	58.413	ENSPFOG00000003118	shq1	81	56.659	Poecilia_formosa
ENSPMAG00000005372	shq1	73	54.434	ENSPMEG00000011076	shq1	77	52.235	Poecilia_mexicana
ENSPMAG00000005372	shq1	83	55.405	ENSPREG00000000591	shq1	75	54.156	Poecilia_reticulata
ENSPMAG00000005372	shq1	99	55.531	ENSPPYG00000013717	SHQ1	76	53.982	Pongo_abelii
ENSPMAG00000005372	shq1	99	57.718	ENSPCAG00000009035	SHQ1	77	57.271	Procavia_capensis
ENSPMAG00000005372	shq1	99	56.195	ENSPCOG00000008415	SHQ1	76	55.973	Propithecus_coquereli
ENSPMAG00000005372	shq1	99	54.279	ENSPVAG00000017392	SHQ1	76	56.376	Pteropus_vampyrus
ENSPMAG00000005372	shq1	99	57.658	ENSPNYG00000003878	shq1	72	58.108	Pundamilia_nyererei
ENSPMAG00000005372	shq1	95	59.811	ENSPNAG00000026840	shq1	71	58.676	Pygocentrus_nattereri
ENSPMAG00000005372	shq1	99	56.757	ENSRNOG00000005433	Shq1	72	56.532	Rattus_norvegicus
ENSPMAG00000005372	shq1	99	54.036	ENSRBIG00000026280	SHQ1	76	53.363	Rhinopithecus_bieti
ENSPMAG00000005372	shq1	99	55.947	ENSRROG00000034126	SHQ1	77	54.185	Rhinopithecus_roxellana
ENSPMAG00000005372	shq1	99	48.678	ENSSBOG00000021038	SHQ1	74	47.797	Saimiri_boliviensis_boliviensis
ENSPMAG00000005372	shq1	98	55.405	ENSSHAG00000015077	SHQ1	77	54.955	Sarcophilus_harrisii
ENSPMAG00000005372	shq1	98	58.124	ENSSFOG00015016241	shq1	78	58.124	Scleropages_formosus
ENSPMAG00000005372	shq1	98	56.881	ENSSMAG00000016151	shq1	71	56.236	Scophthalmus_maximus
ENSPMAG00000005372	shq1	94	59.712	ENSSDUG00000011986	shq1	70	59.404	Seriola_dumerili
ENSPMAG00000005372	shq1	94	59.233	ENSSLDG00000013908	shq1	70	57.798	Seriola_lalandi_dorsalis
ENSPMAG00000005372	shq1	77	58.382	ENSSARG00000007119	SHQ1	60	58.092	Sorex_araneus
ENSPMAG00000005372	shq1	78	52.841	ENSSPUG00000011526	-	65	53.521	Sphenodon_punctatus
ENSPMAG00000005372	shq1	99	57.080	ENSSSCG00000011518	SHQ1	76	56.858	Sus_scrofa
ENSPMAG00000005372	shq1	94	56.028	ENSTGUG00000009933	SHQ1	77	54.831	Taeniopygia_guttata
ENSPMAG00000005372	shq1	93	54.458	ENSTRUG00000009446	shq1	74	53.061	Takifugu_rubripes
ENSPMAG00000005372	shq1	93	56.595	ENSTNIG00000007354	shq1	94	55.530	Tetraodon_nigroviridis
ENSPMAG00000005372	shq1	72	80.851	ENSTBEG00000011295	SHQ1	56	80.851	Tupaia_belangeri
ENSPMAG00000005372	shq1	99	56.763	ENSTTRG00000005320	SHQ1	76	56.541	Tursiops_truncatus
ENSPMAG00000005372	shq1	99	56.916	ENSUMAG00000024031	SHQ1	74	57.437	Ursus_maritimus
ENSPMAG00000005372	shq1	58	53.933	ENSVPAG00000004880	SHQ1	74	45.813	Vicugna_pacos
ENSPMAG00000005372	shq1	89	59.102	ENSVVUG00000013906	SHQ1	76	56.823	Vulpes_vulpes
ENSPMAG00000005372	shq1	98	55.405	ENSXETG00000032215	shq1	71	54.955	Xenopus_tropicalis