EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005419 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 5905 bases
Position: chrGL482452:11889-17793
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000005965	RTC	PF01137.21	8.3e-08	1	1
ENSPMAP00000005965	RTC_insert	PF05189.13	7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000005993	-	567	-	ENSPMAP00000005965	188 (aa)	-	S4RL79

Gene Model

Click here to download ENSPMAG00000005419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005419's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005419	-	95	69.663	ENSG00000120158	RCL1	93	72.656	Homo_sapiens
ENSPMAG00000005419	-	95	67.416	ENSAPLG00000006031	RCL1	53	67.416	Anas_platyrhynchos
ENSPMAG00000005419	-	98	67.391	ENSTSYG00000009592	RCL1	98	67.391	Carlito_syrichta
ENSPMAG00000005419	-	95	70.225	ENSCCAG00000033505	RCL1	95	70.225	Cebus_capucinus
ENSPMAG00000005419	-	95	69.101	ENSCATG00000034721	RCL1	95	69.101	Cercocebus_atys
ENSPMAG00000005419	-	95	65.363	ENSCPBG00000025481	RCL1	51	65.363	Chrysemys_picta_bellii
ENSPMAG00000005419	-	95	68.715	ENSCGRG00000005843	Rcl1	54	68.715	Cricetulus_griseus_crigri
ENSPMAG00000005419	-	96	66.111	ENSCSEG00000000712	rcl1	51	66.111	Cynoglossus_semilaevis
ENSPMAG00000005419	-	95	70.391	ENSDNOG00000019911	RCL1	83	70.391	Dasypus_novemcinctus
ENSPMAG00000005419	-	95	55.000	ENSETEG00000014087	-	54	54.696	Echinops_telfairi
ENSPMAG00000005419	-	95	68.156	ENSFDAG00000004209	RCL1	54	68.156	Fukomys_damarensis
ENSPMAG00000005419	-	95	69.101	ENSGGOG00000015041	RCL1	95	69.101	Gorilla_gorilla
ENSPMAG00000005419	-	95	63.483	ENSHGLG00000005368	-	51	63.483	Heterocephalus_glaber_female
ENSPMAG00000005419	-	95	63.483	ENSHGLG00100018010	-	50	63.483	Heterocephalus_glaber_male
ENSPMAG00000005419	-	95	67.039	ENSHGLG00100008718	-	51	67.039	Heterocephalus_glaber_male
ENSPMAG00000005419	-	90	51.445	ENSJJAG00000000764	-	83	51.445	Jaculus_jaculus
ENSPMAG00000005419	-	95	66.480	ENSLBEG00000003957	rcl1	51	66.480	Labrus_bergylta
ENSPMAG00000005419	-	95	69.101	ENSMNEG00000012288	RCL1	95	69.101	Macaca_nemestrina
ENSPMAG00000005419	-	96	64.835	ENSMGAG00000002245	RCL1	83	64.835	Meleagris_gallopavo
ENSPMAG00000005419	-	95	68.715	ENSMAUG00000008922	Rcl1	83	68.715	Mesocricetus_auratus
ENSPMAG00000005419	-	95	68.715	MGP_PahariEiJ_G0014346	Rcl1	99	69.412	Mus_pahari
ENSPMAG00000005419	-	95	69.274	MGP_SPRETEiJ_G0023771	Rcl1	99	69.412	Mus_spretus
ENSPMAG00000005419	-	95	69.832	ENSNBRG00000019854	rcl1	50	69.444	Neolamprologus_brichardi
ENSPMAG00000005419	-	99	67.380	ENSODEG00000004151	RCL1	60	67.380	Octodon_degus
ENSPMAG00000005419	-	95	66.292	ENSOANG00000013193	-	70	66.292	Ornithorhynchus_anatinus
ENSPMAG00000005419	-	96	67.778	ENSORLG00015001122	rcl1	52	68.156	Oryzias_latipes_hsok
ENSPMAG00000005419	-	98	66.304	ENSPPRG00000022645	RCL1	98	66.304	Panthera_pardus
ENSPMAG00000005419	-	95	67.598	ENSPTIG00000019031	RCL1	83	67.598	Panthera_tigris_altaica
ENSPMAG00000005419	-	95	69.663	ENSPTRG00000020743	RCL1	95	69.663	Pan_troglodytes
ENSPMAG00000005419	-	95	67.598	ENSPSIG00000012302	RCL1	54	67.598	Pelodiscus_sinensis
ENSPMAG00000005419	-	95	67.039	ENSPCIG00000000188	RCL1	51	67.039	Phascolarctos_cinereus
ENSPMAG00000005419	-	95	69.663	ENSPCOG00000009611	RCL1	95	69.663	Propithecus_coquereli
ENSPMAG00000005419	-	95	69.101	ENSRROG00000029781	RCL1	95	69.101	Rhinopithecus_roxellana
ENSPMAG00000005419	-	95	69.101	ENSSBOG00000026369	RCL1	95	69.101	Saimiri_boliviensis_boliviensis
ENSPMAG00000005419	-	95	67.598	ENSSHAG00000014086	RCL1	54	67.598	Sarcophilus_harrisii
ENSPMAG00000005419	-	85	30.539	ENSSPUG00000016255	-	97	30.539	Sphenodon_punctatus
ENSPMAG00000005419	-	95	68.156	ENSUMAG00000017890	RCL1	53	68.156	Ursus_maritimus
ENSPMAG00000005419	-	95	68.715	ENSVPAG00000009188	RCL1	54	68.715	Vicugna_pacos
ENSPMAG00000005419	-	90	30.636	ENSXETG00000031661	RTCA	50	30.636	Xenopus_tropicalis