EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005438 (Gene tree)
Gene ID: -
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 24607 bases
Position: chrGL501067:15322-39928
Accession: ZDB-GENE-030131-577
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006044	RRM_4	PF10598.9	4.3e-48	1	1
ENSPMAP00000006044	U5_2-snRNA_bdg	PF10597.9	3e-74	1	1
ENSPMAP00000006044	PRO8NT	PF08082.11	1.7e-65	1	1
ENSPMAP00000006044	U6-snRNA_bdg	PF10596.9	1.9e-90	1	1
ENSPMAP00000006044	PROCN	PF08083.11	1.6e-236	1	1
ENSPMAP00000006044	PRP8_domainIV	PF12134.8	2.8e-130	1	1
ENSPMAP00000006044	PROCT	PF08084.11	1.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006072	-	7062	-	ENSPMAP00000006044	2241 (aa)	-	S4RLF8

Gene Model

Click here to download ENSPMAG00000005438's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005438's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005438	prpf8	100	93.898	ENSG00000174231	PRPF8	96	93.853	Homo_sapiens
ENSPMAG00000005438	prpf8	100	93.987	ENSAPOG00000010079	prpf8	96	93.942	Acanthochromis_polyacanthus
ENSPMAG00000005438	prpf8	100	93.898	ENSAMEG00000007940	PRPF8	96	93.853	Ailuropoda_melanoleuca
ENSPMAG00000005438	prpf8	100	92.489	ENSACIG00000018280	prpf8	96	92.444	Amphilophus_citrinellus
ENSPMAG00000005438	prpf8	100	93.987	ENSAOCG00000010725	prpf8	96	93.942	Amphiprion_ocellaris
ENSPMAG00000005438	prpf8	100	93.987	ENSAPEG00000014397	prpf8	96	93.942	Amphiprion_percula
ENSPMAG00000005438	prpf8	100	93.318	ENSATEG00000010062	prpf8	96	93.274	Anabas_testudineus
ENSPMAG00000005438	prpf8	100	93.683	ENSAPLG00000010357	PRPF8	100	93.639	Anas_platyrhynchos
ENSPMAG00000005438	prpf8	82	92.063	ENSACAG00000014784	PRPF8	95	92.009	Anolis_carolinensis
ENSPMAG00000005438	prpf8	100	93.898	ENSANAG00000032629	PRPF8	96	93.853	Aotus_nancymaae
ENSPMAG00000005438	prpf8	100	93.898	ENSACLG00000020858	prpf8	97	93.853	Astatotilapia_calliptera
ENSPMAG00000005438	prpf8	100	93.808	ENSAMXG00000020291	prpf8	96	93.764	Astyanax_mexicanus
ENSPMAG00000005438	prpf8	100	93.898	ENSBTAG00000011488	PRPF8	96	93.853	Bos_taurus
ENSPMAG00000005438	prpf8	100	85.207	WBGene00004187	prp-8	97	85.156	Caenorhabditis_elegans
ENSPMAG00000005438	prpf8	100	93.898	ENSCJAG00000001911	PRPF8	96	93.853	Callithrix_jacchus
ENSPMAG00000005438	prpf8	100	93.898	ENSCAFG00000019221	PRPF8	96	93.853	Canis_familiaris
ENSPMAG00000005438	prpf8	99	93.887	ENSCAFG00020009943	PRPF8	100	93.842	Canis_lupus_dingo
ENSPMAG00000005438	prpf8	100	93.898	ENSCHIG00000017499	PRPF8	96	93.853	Capra_hircus
ENSPMAG00000005438	prpf8	100	93.898	ENSTSYG00000014120	PRPF8	96	93.853	Carlito_syrichta
ENSPMAG00000005438	prpf8	100	91.670	ENSCAPG00000009459	PRPF8	99	91.626	Cavia_aperea
ENSPMAG00000005438	prpf8	100	93.898	ENSCPOG00000010379	PRPF8	96	93.853	Cavia_porcellus
ENSPMAG00000005438	prpf8	100	93.898	ENSCCAG00000031983	-	96	93.853	Cebus_capucinus
ENSPMAG00000005438	prpf8	100	93.898	ENSCATG00000038595	PRPF8	96	93.853	Cercocebus_atys
ENSPMAG00000005438	prpf8	100	93.898	ENSCLAG00000004388	PRPF8	96	93.853	Chinchilla_lanigera
ENSPMAG00000005438	prpf8	100	93.898	ENSCSAG00000013929	PRPF8	96	93.853	Chlorocebus_sabaeus
ENSPMAG00000005438	prpf8	80	95.333	ENSCHOG00000008590	PRPF8	84	95.333	Choloepus_hoffmanni
ENSPMAG00000005438	prpf8	100	93.853	ENSCPBG00000020409	PRPF8	96	93.808	Chrysemys_picta_bellii
ENSPMAG00000005438	prpf8	100	90.939	ENSCSAVG00000007825	-	100	90.885	Ciona_savignyi
ENSPMAG00000005438	prpf8	100	93.898	ENSCANG00000043088	PRPF8	96	93.853	Colobus_angolensis_palliatus
ENSPMAG00000005438	prpf8	77	96.457	ENSCGRG00000005129	Prpf8	100	96.457	Cricetulus_griseus_crigri
ENSPMAG00000005438	prpf8	100	93.942	ENSCSEG00000007905	prpf8	96	93.898	Cynoglossus_semilaevis
ENSPMAG00000005438	prpf8	100	93.898	ENSDARG00000026180	prpf8	96	93.853	Danio_rerio
ENSPMAG00000005438	prpf8	93	94.188	ENSDNOG00000018471	PRPF8	95	94.140	Dasypus_novemcinctus
ENSPMAG00000005438	prpf8	82	91.964	ENSDORG00000006185	Prpf8	90	91.888	Dipodomys_ordii
ENSPMAG00000005438	prpf8	100	90.254	FBgn0033688	Prp8	94	90.209	Drosophila_melanogaster
ENSPMAG00000005438	prpf8	100	88.864	ENSETEG00000017592	PRPF8	96	88.820	Echinops_telfairi
ENSPMAG00000005438	prpf8	100	93.366	ENSEBUG00000006548	prpf8	96	93.366	Eptatretus_burgeri
ENSPMAG00000005438	prpf8	100	93.898	ENSEASG00005009514	PRPF8	96	94.087	Equus_asinus_asinus
ENSPMAG00000005438	prpf8	100	93.898	ENSECAG00000021318	PRPF8	99	93.853	Equus_caballus
ENSPMAG00000005438	prpf8	66	96.296	ENSEEUG00000012120	-	64	96.296	Erinaceus_europaeus
ENSPMAG00000005438	prpf8	98	92.620	ENSELUG00000007120	prpf8	95	92.574	Esox_lucius
ENSPMAG00000005438	prpf8	100	93.898	ENSFCAG00000006297	PRPF8	96	93.853	Felis_catus
ENSPMAG00000005438	prpf8	100	93.808	ENSFALG00000006628	PRPF8	96	93.764	Ficedula_albicollis
ENSPMAG00000005438	prpf8	100	93.898	ENSFDAG00000004711	PRPF8	96	93.853	Fukomys_damarensis
ENSPMAG00000005438	prpf8	100	93.719	ENSFHEG00000021084	prpf8	96	93.675	Fundulus_heteroclitus
ENSPMAG00000005438	prpf8	100	91.678	ENSGMOG00000002028	prpf8	96	91.634	Gadus_morhua
ENSPMAG00000005438	prpf8	100	93.808	ENSGALG00000002943	PRPF8	96	93.764	Gallus_gallus
ENSPMAG00000005438	prpf8	100	93.808	ENSGAFG00000010337	prpf8	96	93.764	Gambusia_affinis
ENSPMAG00000005438	prpf8	100	93.853	ENSGACG00000008504	prpf8	96	93.808	Gasterosteus_aculeatus
ENSPMAG00000005438	prpf8	100	93.853	ENSGAGG00000008350	PRPF8	96	93.808	Gopherus_agassizii
ENSPMAG00000005438	prpf8	100	93.898	ENSGGOG00000005516	PRPF8	96	93.853	Gorilla_gorilla
ENSPMAG00000005438	prpf8	100	93.942	ENSHBUG00000016192	prpf8	96	93.898	Haplochromis_burtoni
ENSPMAG00000005438	prpf8	100	93.898	ENSHGLG00000012029	PRPF8	96	93.853	Heterocephalus_glaber_female
ENSPMAG00000005438	prpf8	100	93.898	ENSHGLG00100016494	PRPF8	96	93.853	Heterocephalus_glaber_male
ENSPMAG00000005438	prpf8	100	93.853	ENSHCOG00000016414	prpf8	96	93.808	Hippocampus_comes
ENSPMAG00000005438	prpf8	100	93.675	ENSIPUG00000023230	prpf8	96	93.630	Ictalurus_punctatus
ENSPMAG00000005438	prpf8	100	93.898	ENSSTOG00000005128	PRPF8	96	93.853	Ictidomys_tridecemlineatus
ENSPMAG00000005438	prpf8	100	91.715	ENSJJAG00000021159	Prpf8	96	91.670	Jaculus_jaculus
ENSPMAG00000005438	prpf8	100	93.942	ENSKMAG00000016118	prpf8	96	93.898	Kryptolebias_marmoratus
ENSPMAG00000005438	prpf8	100	93.898	ENSLBEG00000026903	prpf8	96	93.853	Labrus_bergylta
ENSPMAG00000005438	prpf8	94	92.315	ENSLACG00000010479	PRPF8	99	94.203	Latimeria_chalumnae
ENSPMAG00000005438	prpf8	100	93.678	ENSLOCG00000005409	prpf8	96	93.767	Lepisosteus_oculatus
ENSPMAG00000005438	prpf8	100	93.898	ENSLAFG00000015445	PRPF8	96	93.853	Loxodonta_africana
ENSPMAG00000005438	prpf8	100	93.898	ENSMFAG00000039995	PRPF8	96	93.853	Macaca_fascicularis
ENSPMAG00000005438	prpf8	100	93.898	ENSMMUG00000004820	PRPF8	96	93.853	Macaca_mulatta
ENSPMAG00000005438	prpf8	100	93.898	ENSMNEG00000035713	PRPF8	96	93.853	Macaca_nemestrina
ENSPMAG00000005438	prpf8	100	93.898	ENSMLEG00000037937	PRPF8	96	93.853	Mandrillus_leucophaeus
ENSPMAG00000005438	prpf8	100	94.031	ENSMAMG00000008919	prpf8	96	93.987	Mastacembelus_armatus
ENSPMAG00000005438	prpf8	100	93.898	ENSMZEG00005015073	prpf8	96	93.853	Maylandia_zebra
ENSPMAG00000005438	prpf8	100	93.808	ENSMGAG00000004769	PRPF8	96	93.764	Meleagris_gallopavo
ENSPMAG00000005438	prpf8	100	93.898	ENSMICG00000010320	PRPF8	96	93.853	Microcebus_murinus
ENSPMAG00000005438	prpf8	100	93.898	ENSMOCG00000016838	Prpf8	96	93.853	Microtus_ochrogaster
ENSPMAG00000005438	prpf8	100	93.541	ENSMMOG00000011887	prpf8	96	93.497	Mola_mola
ENSPMAG00000005438	prpf8	100	93.808	ENSMODG00000010480	PRPF8	96	93.764	Monodelphis_domestica
ENSPMAG00000005438	prpf8	97	95.334	ENSMALG00000003558	prpf8	96	95.334	Monopterus_albus
ENSPMAG00000005438	prpf8	100	93.942	MGP_CAROLIEiJ_G0016740	Prpf8	96	93.898	Mus_caroli
ENSPMAG00000005438	prpf8	100	93.942	ENSMUSG00000020850	Prpf8	96	93.898	Mus_musculus
ENSPMAG00000005438	prpf8	100	93.987	MGP_PahariEiJ_G0017877	Prpf8	96	93.942	Mus_pahari
ENSPMAG00000005438	prpf8	100	93.942	MGP_SPRETEiJ_G0017583	Prpf8	96	93.898	Mus_spretus
ENSPMAG00000005438	prpf8	100	93.898	ENSMPUG00000013227	PRPF8	96	93.853	Mustela_putorius_furo
ENSPMAG00000005438	prpf8	100	93.861	ENSMLUG00000002666	PRPF8	96	93.817	Myotis_lucifugus
ENSPMAG00000005438	prpf8	100	92.116	ENSNGAG00000005305	Prpf8	96	92.071	Nannospalax_galili
ENSPMAG00000005438	prpf8	100	93.942	ENSNBRG00000013127	prpf8	96	93.898	Neolamprologus_brichardi
ENSPMAG00000005438	prpf8	100	88.463	ENSNLEG00000000897	PRPF8	95	88.330	Nomascus_leucogenys
ENSPMAG00000005438	prpf8	100	92.071	ENSMEUG00000015999	PRPF8	98	92.027	Notamacropus_eugenii
ENSPMAG00000005438	prpf8	100	93.630	ENSOPRG00000003102	PRPF8	96	93.586	Ochotona_princeps
ENSPMAG00000005438	prpf8	100	93.898	ENSODEG00000008468	PRPF8	96	93.853	Octodon_degus
ENSPMAG00000005438	prpf8	100	93.987	ENSONIG00000008153	prpf8	96	93.942	Oreochromis_niloticus
ENSPMAG00000005438	prpf8	85	96.449	ENSOANG00000004250	PRPF8	97	96.449	Ornithorhynchus_anatinus
ENSPMAG00000005438	prpf8	100	93.898	ENSOCUG00000000081	PRPF8	96	93.853	Oryctolagus_cuniculus
ENSPMAG00000005438	prpf8	100	93.764	ENSORLG00000008036	prpf8	96	93.678	Oryzias_latipes
ENSPMAG00000005438	prpf8	100	93.722	ENSORLG00020021070	prpf8	95	93.678	Oryzias_latipes_hni
ENSPMAG00000005438	prpf8	100	93.764	ENSORLG00015002340	prpf8	95	93.719	Oryzias_latipes_hsok
ENSPMAG00000005438	prpf8	100	91.659	ENSOMEG00000016866	prpf8	95	92.160	Oryzias_melastigma
ENSPMAG00000005438	prpf8	100	93.772	ENSOARG00000013312	PRPF8	96	93.728	Ovis_aries
ENSPMAG00000005438	prpf8	100	93.898	ENSPPAG00000042753	PRPF8	96	93.853	Pan_paniscus
ENSPMAG00000005438	prpf8	100	93.898	ENSPPRG00000008746	PRPF8	96	93.853	Panthera_pardus
ENSPMAG00000005438	prpf8	100	93.808	ENSPTIG00000019200	PRPF8	96	93.764	Panthera_tigris_altaica
ENSPMAG00000005438	prpf8	100	93.898	ENSPTRG00000039576	PRPF8	96	93.853	Pan_troglodytes
ENSPMAG00000005438	prpf8	100	93.898	ENSPANG00000024607	PRPF8	96	93.853	Papio_anubis
ENSPMAG00000005438	prpf8	100	93.764	ENSPKIG00000011201	prpf8	96	93.719	Paramormyrops_kingsleyae
ENSPMAG00000005438	prpf8	100	93.808	ENSPSIG00000013393	PRPF8	96	93.764	Pelodiscus_sinensis
ENSPMAG00000005438	prpf8	100	93.898	ENSPEMG00000021699	Prpf8	96	93.853	Peromyscus_maniculatus_bairdii
ENSPMAG00000005438	prpf8	100	93.808	ENSPCIG00000022603	PRPF8	100	93.753	Phascolarctos_cinereus
ENSPMAG00000005438	prpf8	100	93.808	ENSPFOG00000007005	prpf8	95	93.764	Poecilia_formosa
ENSPMAG00000005438	prpf8	100	92.383	ENSPLAG00000020777	prpf8	96	92.339	Poecilia_latipinna
ENSPMAG00000005438	prpf8	100	93.808	ENSPMEG00000004051	prpf8	95	93.764	Poecilia_mexicana
ENSPMAG00000005438	prpf8	100	93.853	ENSPREG00000021902	prpf8	96	93.808	Poecilia_reticulata
ENSPMAG00000005438	prpf8	100	93.898	ENSPPYG00000007777	PRPF8	96	93.853	Pongo_abelii
ENSPMAG00000005438	prpf8	90	93.317	ENSPCAG00000008938	PRPF8	86	93.317	Procavia_capensis
ENSPMAG00000005438	prpf8	100	93.898	ENSPCOG00000015182	PRPF8	96	93.853	Propithecus_coquereli
ENSPMAG00000005438	prpf8	92	95.949	ENSPVAG00000002134	PRPF8	88	95.949	Pteropus_vampyrus
ENSPMAG00000005438	prpf8	100	93.942	ENSPNYG00000016356	prpf8	96	93.898	Pundamilia_nyererei
ENSPMAG00000005438	prpf8	100	93.942	ENSPNAG00000009247	prpf8	96	93.898	Pygocentrus_nattereri
ENSPMAG00000005438	prpf8	100	93.942	ENSRNOG00000003495	Prpf8	96	93.898	Rattus_norvegicus
ENSPMAG00000005438	prpf8	100	93.898	ENSRBIG00000031219	PRPF8	100	93.440	Rhinopithecus_bieti
ENSPMAG00000005438	prpf8	100	93.898	ENSRROG00000038014	PRPF8	100	93.440	Rhinopithecus_roxellana
ENSPMAG00000005438	prpf8	100	61.460	YHR165C	PRP8	93	61.460	Saccharomyces_cerevisiae
ENSPMAG00000005438	prpf8	100	93.898	ENSSBOG00000029717	PRPF8	96	93.853	Saimiri_boliviensis_boliviensis
ENSPMAG00000005438	prpf8	100	93.764	ENSSHAG00000006167	PRPF8	96	93.719	Sarcophilus_harrisii
ENSPMAG00000005438	prpf8	100	93.808	ENSSFOG00015013905	prpf8	96	93.764	Scleropages_formosus
ENSPMAG00000005438	prpf8	100	93.719	ENSSMAG00000017736	prpf8	96	93.675	Scophthalmus_maximus
ENSPMAG00000005438	prpf8	100	93.987	ENSSDUG00000003029	prpf8	96	93.942	Seriola_dumerili
ENSPMAG00000005438	prpf8	71	96.245	ENSSLDG00000017096	prpf8	100	96.245	Seriola_lalandi_dorsalis
ENSPMAG00000005438	prpf8	87	91.794	ENSSARG00000002892	PRPF8	83	91.794	Sorex_araneus
ENSPMAG00000005438	prpf8	100	93.675	ENSSPUG00000007463	PRPF8	96	93.630	Sphenodon_punctatus
ENSPMAG00000005438	prpf8	100	93.363	ENSSPAG00000015639	prpf8	96	93.318	Stegastes_partitus
ENSPMAG00000005438	prpf8	100	93.898	ENSSSCG00000017817	PRPF8	96	93.853	Sus_scrofa
ENSPMAG00000005438	prpf8	100	93.808	ENSTGUG00000005648	-	96	93.764	Taeniopygia_guttata
ENSPMAG00000005438	prpf8	54	96.859	ENSTGUG00000015597	-	95	96.859	Taeniopygia_guttata
ENSPMAG00000005438	prpf8	100	93.898	ENSTRUG00000015906	prpf8	96	93.853	Takifugu_rubripes
ENSPMAG00000005438	prpf8	94	96.057	ENSTNIG00000003460	prpf8	95	96.057	Tetraodon_nigroviridis
ENSPMAG00000005438	prpf8	92	96.046	ENSTBEG00000006431	PRPF8	87	96.046	Tupaia_belangeri
ENSPMAG00000005438	prpf8	100	93.630	ENSTTRG00000006869	PRPF8	96	93.586	Tursiops_truncatus
ENSPMAG00000005438	prpf8	52	91.617	ENSUAMG00000015644	-	89	91.531	Ursus_americanus
ENSPMAG00000005438	prpf8	100	93.630	ENSUMAG00000009385	PRPF8	96	93.586	Ursus_maritimus
ENSPMAG00000005438	prpf8	70	98.621	ENSVPAG00000006063	-	67	98.621	Vicugna_pacos
ENSPMAG00000005438	prpf8	100	93.898	ENSVVUG00000021695	PRPF8	95	93.853	Vulpes_vulpes
ENSPMAG00000005438	prpf8	100	93.767	ENSXETG00000022259	prpf8	96	93.722	Xenopus_tropicalis
ENSPMAG00000005438	prpf8	100	93.853	ENSXCOG00000012775	prpf8	96	93.808	Xiphophorus_couchianus
ENSPMAG00000005438	prpf8	100	93.808	ENSXMAG00000008505	prpf8	96	93.764	Xiphophorus_maculatus