EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005446 (Gene tree)
Gene ID: -
Gene Symbol: rsl1d1
Alias: -
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 9257 bases
Position: chrGL480809:11894-21150
Accession: ZDB-GENE-130603-67
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006003	Ribosomal_L1	PF00687.21	5.4e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006031	-	1475	-	ENSPMAP00000006003	445 (aa)	-	S4RLB7

Gene Model

Click here to download ENSPMAG00000005446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005446	rsl1d1	87	38.213	ENSG00000171490	RSL1D1	100	58.163	Homo_sapiens
ENSPMAG00000005446	rsl1d1	91	37.650	ENSANAG00000034590	-	81	37.379	Aotus_nancymaae
ENSPMAG00000005446	rsl1d1	60	42.238	ENSACLG00000017535	rsl1d1	58	49.282	Astatotilapia_calliptera
ENSPMAG00000005446	rsl1d1	60	43.060	ENSAMXG00000008624	rsl1d1	60	46.429	Astyanax_mexicanus
ENSPMAG00000005446	rsl1d1	87	36.496	ENSCCAG00000031641	-	80	34.550	Cebus_capucinus
ENSPMAG00000005446	rsl1d1	51	32.456	ENSCSAVG00000011797	-	56	32.984	Ciona_savignyi
ENSPMAG00000005446	rsl1d1	53	48.085	ENSCSEG00000019693	rsl1d1	56	50.000	Cynoglossus_semilaevis
ENSPMAG00000005446	rsl1d1	53	47.863	ENSCVAG00000000672	rsl1d1	59	49.761	Cyprinodon_variegatus
ENSPMAG00000005446	rsl1d1	98	36.009	ENSDNOG00000040779	-	76	35.484	Dasypus_novemcinctus
ENSPMAG00000005446	rsl1d1	99	36.819	ENSDNOG00000004601	-	75	36.175	Dasypus_novemcinctus
ENSPMAG00000005446	rsl1d1	85	40.099	ENSEASG00005011499	RSL1D1	75	41.310	Equus_asinus_asinus
ENSPMAG00000005446	rsl1d1	84	41.562	ENSECAG00000025036	RSL1D1	75	41.814	Equus_caballus
ENSPMAG00000005446	rsl1d1	67	41.722	ENSELUG00000019243	rsl1d1	71	46.479	Esox_lucius
ENSPMAG00000005446	rsl1d1	60	43.657	ENSFHEG00000017235	rsl1d1	58	49.761	Fundulus_heteroclitus
ENSPMAG00000005446	rsl1d1	57	44.882	ENSGMOG00000013048	rsl1d1	73	47.847	Gadus_morhua
ENSPMAG00000005446	rsl1d1	67	40.000	ENSGAFG00000020794	rsl1d1	56	48.113	Gambusia_affinis
ENSPMAG00000005446	rsl1d1	53	44.726	ENSGACG00000004483	rsl1d1	62	46.512	Gasterosteus_aculeatus
ENSPMAG00000005446	rsl1d1	60	43.956	ENSHBUG00000001551	rsl1d1	58	49.761	Haplochromis_burtoni
ENSPMAG00000005446	rsl1d1	66	40.881	ENSIPUG00000001677	rsl1d1	55	48.325	Ictalurus_punctatus
ENSPMAG00000005446	rsl1d1	60	45.353	ENSLOCG00000007416	rsl1d1	51	48.598	Lepisosteus_oculatus
ENSPMAG00000005446	rsl1d1	55	44.490	ENSMZEG00005007150	rsl1d1	72	42.803	Maylandia_zebra
ENSPMAG00000005446	rsl1d1	53	45.299	ENSONIG00000019757	rsl1d1	59	48.325	Oreochromis_niloticus
ENSPMAG00000005446	rsl1d1	60	42.910	ENSORLG00000002877	rsl1d1	60	46.890	Oryzias_latipes
ENSPMAG00000005446	rsl1d1	60	43.123	ENSORLG00020006636	rsl1d1	60	46.411	Oryzias_latipes_hni
ENSPMAG00000005446	rsl1d1	60	43.123	ENSORLG00015005427	rsl1d1	60	46.411	Oryzias_latipes_hsok
ENSPMAG00000005446	rsl1d1	87	38.213	ENSPPAG00000039716	RSL1D1	86	36.383	Pan_paniscus
ENSPMAG00000005446	rsl1d1	87	37.965	ENSPTRG00000007777	RSL1D1	86	36.166	Pan_troglodytes
ENSPMAG00000005446	rsl1d1	65	36.859	ENSPKIG00000022687	rsl1d1	56	43.062	Paramormyrops_kingsleyae
ENSPMAG00000005446	rsl1d1	60	43.321	ENSPMGG00000022261	rsl1d1	72	48.325	Periophthalmus_magnuspinnatus
ENSPMAG00000005446	rsl1d1	54	46.473	ENSPFOG00000005017	rsl1d1	59	49.065	Poecilia_formosa
ENSPMAG00000005446	rsl1d1	60	44.043	ENSPLAG00000000482	rsl1d1	52	49.528	Poecilia_latipinna
ENSPMAG00000005446	rsl1d1	55	46.122	ENSPNYG00000002850	rsl1d1	57	49.761	Pundamilia_nyererei
ENSPMAG00000005446	rsl1d1	56	45.783	ENSSFOG00015011354	rsl1d1	60	48.804	Scleropages_formosus
ENSPMAG00000005446	rsl1d1	52	46.753	ENSSMAG00000007957	rsl1d1	60	47.847	Scophthalmus_maximus