EuRBPDB

Description
Ensembl ID
ENSPMAG00000005461 (Gene tree)
Gene ID
-
Gene Symbol
lsm12a
Alias
-
Full Name
LSM12 homolog a
Gene Type
protein_coding
Species
Petromyzon_marinus
Status
putative
Strand
Minus strand
Length
10065 bases
Position
chrGL483614:48-10112
Accession
ZDB-GENE-040516-12
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSPMAP00000006020ADPF09793.93.2e-2411
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSPMAT00000006048-522-ENSPMAP00000006020174 (aa)-S4RLD4
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSPMAG00000005461lsm12a9966.279ENSG00000161654LSM128866.279Homo_sapiens
ENSPMAG00000005461lsm12a9968.571ENSAPOG00000007907lsm12b8968.571Acanthochromis_polyacanthus
ENSPMAG00000005461lsm12a9964.571ENSAMEG00000018321LSM128864.571Ailuropoda_melanoleuca
ENSPMAG00000005461lsm12a9968.571ENSACIG00000008538lsm12b8968.571Amphilophus_citrinellus
ENSPMAG00000005461lsm12a9968.000ENSAOCG00000021847lsm12b7868.000Amphiprion_ocellaris
ENSPMAG00000005461lsm12a9968.000ENSAPEG00000002252lsm12b8968.000Amphiprion_percula
ENSPMAG00000005461lsm12a9966.286ENSATEG00000005705lsm12b8966.286Anabas_testudineus
ENSPMAG00000005461lsm12a9965.896ENSACAG00000004618LSM128965.896Anolis_carolinensis
ENSPMAG00000005461lsm12a9966.279ENSANAG00000029011LSM128866.279Aotus_nancymaae
ENSPMAG00000005461lsm12a9968.571ENSACLG00000026332lsm12b8968.571Astatotilapia_calliptera
ENSPMAG00000005461lsm12a9964.000ENSAMXG00000036117lsm12a8164.000Astyanax_mexicanus
ENSPMAG00000005461lsm12a9968.000ENSAMXG00000032952lsm12b8968.000Astyanax_mexicanus
ENSPMAG00000005461lsm12a9966.279ENSBTAG00000016252LSM128866.279Bos_taurus
ENSPMAG00000005461lsm12a9966.279ENSCJAG00000048480LSM128866.279Callithrix_jacchus
ENSPMAG00000005461lsm12a9966.279ENSCAFG00000014379LSM128166.279Canis_familiaris
ENSPMAG00000005461lsm12a9966.279ENSCAFG00020012173LSM128866.279Canis_lupus_dingo
ENSPMAG00000005461lsm12a9966.279ENSCHIG00000018175LSM128866.279Capra_hircus
ENSPMAG00000005461lsm12a9966.279ENSTSYG00000036361LSM128866.279Carlito_syrichta
ENSPMAG00000005461lsm12a8162.411ENSCAPG00000009647LSM127762.411Cavia_aperea
ENSPMAG00000005461lsm12a9965.116ENSCPOG00000012860LSM128865.116Cavia_porcellus
ENSPMAG00000005461lsm12a9966.279ENSCCAG00000032905LSM128866.279Cebus_capucinus
ENSPMAG00000005461lsm12a9966.279ENSCATG00000030577-8866.279Cercocebus_atys
ENSPMAG00000005461lsm12a9965.698ENSCLAG00000015759LSM128865.698Chinchilla_lanigera
ENSPMAG00000005461lsm12a9966.279ENSCSAG00000003486LSM128866.279Chlorocebus_sabaeus
ENSPMAG00000005461lsm12a5170.455ENSCHOG00000001198LSM128170.455Choloepus_hoffmanni
ENSPMAG00000005461lsm12a9966.474ENSCPBG00000027105LSM128966.474Chrysemys_picta_bellii
ENSPMAG00000005461lsm12a9966.279ENSCANG00000043328LSM128866.279Colobus_angolensis_palliatus
ENSPMAG00000005461lsm12a9966.279ENSCGRG00001002094Lsm128866.279Cricetulus_griseus_chok1gshd
ENSPMAG00000005461lsm12a8859.477ENSCGRG00000004316Lsm128659.477Cricetulus_griseus_crigri
ENSPMAG00000005461lsm12a9966.857ENSCSEG00000008434lsm12b8966.857Cynoglossus_semilaevis
ENSPMAG00000005461lsm12a9968.000ENSCVAG00000008755lsm12b8968.000Cyprinodon_variegatus
ENSPMAG00000005461lsm12a9968.571ENSDARG00000109510lsm12b8968.571Danio_rerio
ENSPMAG00000005461lsm12a9968.571ENSDARG00000028848lsm12a8968.571Danio_rerio
ENSPMAG00000005461lsm12a9966.279ENSDNOG00000002418LSM128066.279Dasypus_novemcinctus
ENSPMAG00000005461lsm12a9966.279ENSDORG00000016381Lsm128866.279Dipodomys_ordii
ENSPMAG00000005461lsm12a9435.714FBgn0030364Lsm127936.047Drosophila_melanogaster
ENSPMAG00000005461lsm12a8334.194FBgn0036057CG141648334.194Drosophila_melanogaster
ENSPMAG00000005461lsm12a9966.860ENSETEG00000008374LSM128866.860Echinops_telfairi
ENSPMAG00000005461lsm12a8760.526ENSETEG00000011012-8760.526Echinops_telfairi
ENSPMAG00000005461lsm12a9572.121ENSEBUG00000016299lsm12a9272.121Eptatretus_burgeri
ENSPMAG00000005461lsm12a9966.279ENSEASG00005010155LSM128866.279Equus_asinus_asinus
ENSPMAG00000005461lsm12a9966.279ENSECAG00000009071LSM128866.279Equus_caballus
ENSPMAG00000005461lsm12a7665.909ENSEEUG00000002419-8665.909Erinaceus_europaeus
ENSPMAG00000005461lsm12a9967.429ENSELUG00000000256-8967.429Esox_lucius
ENSPMAG00000005461lsm12a9966.857ENSELUG00000015538lsm12b8963.429Esox_lucius
ENSPMAG00000005461lsm12a9966.279ENSFCAG00000037021LSM128866.279Felis_catus
ENSPMAG00000005461lsm12a7364.567ENSFDAG00000008954LSM127464.567Fukomys_damarensis
ENSPMAG00000005461lsm12a9966.857ENSFHEG00000019913lsm12b8966.857Fundulus_heteroclitus
ENSPMAG00000005461lsm12a7967.153ENSGMOG00000015449lsm12b8767.153Gadus_morhua
ENSPMAG00000005461lsm12a7665.152ENSGALG00000039803LSM128665.152Gallus_gallus
ENSPMAG00000005461lsm12a9967.429ENSGAFG00000011829lsm12b8967.429Gambusia_affinis
ENSPMAG00000005461lsm12a7968.613ENSGACG00000003428lsm12b8768.613Gasterosteus_aculeatus
ENSPMAG00000005461lsm12a9966.474ENSGAGG00000021965LSM128966.474Gopherus_agassizii
ENSPMAG00000005461lsm12a9966.279ENSGGOG00000010589-8866.279Gorilla_gorilla
ENSPMAG00000005461lsm12a9568.263ENSHBUG00000007667lsm12b7468.263Haplochromis_burtoni
ENSPMAG00000005461lsm12a9966.279ENSHGLG00000011411LSM128866.279Heterocephalus_glaber_female
ENSPMAG00000005461lsm12a7665.414ENSHGLG00100000241LSM127165.414Heterocephalus_glaber_male
ENSPMAG00000005461lsm12a9968.000ENSHCOG00000002094lsm12b8968.000Hippocampus_comes
ENSPMAG00000005461lsm12a9965.143ENSIPUG00000014800lsm128965.143Ictalurus_punctatus
ENSPMAG00000005461lsm12a10065.341ENSIPUG00000008936lsm12a9065.341Ictalurus_punctatus
ENSPMAG00000005461lsm12a9966.279ENSSTOG00000007403LSM128866.279Ictidomys_tridecemlineatus
ENSPMAG00000005461lsm12a9760.355ENSJJAG00000011793-8960.355Jaculus_jaculus
ENSPMAG00000005461lsm12a9966.279ENSJJAG00000004364-8866.279Jaculus_jaculus
ENSPMAG00000005461lsm12a9054.088ENSJJAG00000014652-9554.088Jaculus_jaculus
ENSPMAG00000005461lsm12a9567.066ENSKMAG00000007704lsm12b5667.066Kryptolebias_marmoratus
ENSPMAG00000005461lsm12a9968.000ENSLBEG00000027999lsm12b8968.000Labrus_bergylta
ENSPMAG00000005461lsm12a9968.786ENSLACG00000015981LSM128968.786Latimeria_chalumnae
ENSPMAG00000005461lsm12a9968.571ENSLOCG00000013079lsm12b8968.571Lepisosteus_oculatus
ENSPMAG00000005461lsm12a9966.279ENSLAFG00000005202LSM128866.279Loxodonta_africana
ENSPMAG00000005461lsm12a9966.279ENSMFAG00000031376LSM128866.279Macaca_fascicularis
ENSPMAG00000005461lsm12a9966.279ENSMMUG00000006804LSM128866.279Macaca_mulatta
ENSPMAG00000005461lsm12a9966.279ENSMNEG00000030594-8866.279Macaca_nemestrina
ENSPMAG00000005461lsm12a9966.279ENSMLEG00000039934LSM128866.279Mandrillus_leucophaeus
ENSPMAG00000005461lsm12a9968.000ENSMAMG00000004279lsm12b8968.000Mastacembelus_armatus
ENSPMAG00000005461lsm12a9968.571ENSMZEG00005005754lsm12b8968.571Maylandia_zebra
ENSPMAG00000005461lsm12a9966.279ENSMICG00000037219LSM128866.279Microcebus_murinus
ENSPMAG00000005461lsm12a9966.279ENSMOCG00000019878-8866.279Microtus_ochrogaster
ENSPMAG00000005461lsm12a9955.814ENSMOCG00000017015-7555.814Microtus_ochrogaster
ENSPMAG00000005461lsm12a9967.429ENSMMOG00000020848lsm12b8967.429Mola_mola
ENSPMAG00000005461lsm12a9867.836ENSMALG00000007578lsm12b8767.836Monopterus_albus
ENSPMAG00000005461lsm12a9966.279MGP_CAROLIEiJ_G0017241Lsm128866.279Mus_caroli
ENSPMAG00000005461lsm12a9966.279ENSMUSG00000020922Lsm128866.279Mus_musculus
ENSPMAG00000005461lsm12a9960.317MGP_PahariEiJ_G0018371Lsm128960.317Mus_pahari
ENSPMAG00000005461lsm12a9965.698MGP_SPRETEiJ_G0018084Lsm128865.698Mus_spretus
ENSPMAG00000005461lsm12a9966.860ENSMLUG00000006391LSM128866.860Myotis_lucifugus
ENSPMAG00000005461lsm12a9966.279ENSNGAG00000001870Lsm128866.279Nannospalax_galili
ENSPMAG00000005461lsm12a9350.888ENSNGAG00000015429-8850.888Nannospalax_galili
ENSPMAG00000005461lsm12a9968.571ENSNBRG00000006266lsm12b8968.571Neolamprologus_brichardi
ENSPMAG00000005461lsm12a9966.279ENSNLEG00000005580-8866.279Nomascus_leucogenys
ENSPMAG00000005461lsm12a9465.031ENSMEUG00000007501-9965.031Notamacropus_eugenii
ENSPMAG00000005461lsm12a9966.279ENSOPRG00000008552LSM128866.279Ochotona_princeps
ENSPMAG00000005461lsm12a9966.667ENSODEG00000017998-8966.667Octodon_degus
ENSPMAG00000005461lsm12a9960.345ENSODEG00000007886-6660.345Octodon_degus
ENSPMAG00000005461lsm12a9968.571ENSONIG00000007933lsm12b8968.571Oreochromis_niloticus
ENSPMAG00000005461lsm12a9964.571ENSOCUG00000008566-8864.571Oryctolagus_cuniculus
ENSPMAG00000005461lsm12a9964.368ENSOCUG00000027889-9064.368Oryctolagus_cuniculus
ENSPMAG00000005461lsm12a9963.218ENSOCUG00000021254-9063.218Oryctolagus_cuniculus
ENSPMAG00000005461lsm12a9962.644ENSOCUG00000024823-9062.644Oryctolagus_cuniculus
ENSPMAG00000005461lsm12a9967.429ENSORLG00000011310lsm12b8967.429Oryzias_latipes
ENSPMAG00000005461lsm12a9967.429ENSORLG00020002060lsm12b8267.429Oryzias_latipes_hni
ENSPMAG00000005461lsm12a9967.429ENSORLG00015001647lsm12b8267.429Oryzias_latipes_hsok
ENSPMAG00000005461lsm12a9967.429ENSOMEG00000006184lsm12b8267.429Oryzias_melastigma
ENSPMAG00000005461lsm12a9966.279ENSOGAG00000010489LSM128866.279Otolemur_garnettii
ENSPMAG00000005461lsm12a9963.483ENSOARG00000006589LSM128963.483Ovis_aries
ENSPMAG00000005461lsm12a9958.140ENSPPAG00000034974-8858.140Pan_paniscus
ENSPMAG00000005461lsm12a9966.279ENSPPRG00000023420LSM128866.279Panthera_pardus
ENSPMAG00000005461lsm12a7665.909ENSPTIG00000012704-7165.909Panthera_tigris_altaica
ENSPMAG00000005461lsm12a5169.663ENSPTIG00000014850-6569.663Panthera_tigris_altaica
ENSPMAG00000005461lsm12a9966.279ENSPTRG00000009261LSM128866.279Pan_troglodytes
ENSPMAG00000005461lsm12a9966.279ENSPANG00000021315-8866.279Papio_anubis
ENSPMAG00000005461lsm12a9867.251ENSPKIG00000017932-8767.251Paramormyrops_kingsleyae
ENSPMAG00000005461lsm12a9968.000ENSPKIG00000021058lsm12b9167.470Paramormyrops_kingsleyae
ENSPMAG00000005461lsm12a9967.429ENSPMGG00000021344lsm12b8967.429Periophthalmus_magnuspinnatus
ENSPMAG00000005461lsm12a9966.279ENSPEMG00000012199Lsm128866.279Peromyscus_maniculatus_bairdii
ENSPMAG00000005461lsm12a9965.698ENSPCIG00000020244LSM128865.698Phascolarctos_cinereus
ENSPMAG00000005461lsm12a9968.000ENSPFOG00000015930lsm12b8968.000Poecilia_formosa
ENSPMAG00000005461lsm12a9968.000ENSPLAG00000021089lsm12b8968.000Poecilia_latipinna
ENSPMAG00000005461lsm12a9968.000ENSPMEG00000012961lsm12b8968.000Poecilia_mexicana
ENSPMAG00000005461lsm12a8667.333ENSPREG00000010236lsm12b8367.333Poecilia_reticulata
ENSPMAG00000005461lsm12a9966.279ENSPPYG00000008344LSM128866.279Pongo_abelii
ENSPMAG00000005461lsm12a9165.409ENSPCAG00000008790LSM1210065.409Procavia_capensis
ENSPMAG00000005461lsm12a9966.279ENSPCOG00000027951LSM128866.279Propithecus_coquereli
ENSPMAG00000005461lsm12a9965.698ENSPVAG00000013706LSM128865.698Pteropus_vampyrus
ENSPMAG00000005461lsm12a9968.571ENSPNYG00000003386lsm12b8968.571Pundamilia_nyererei
ENSPMAG00000005461lsm12a9963.429ENSPNAG00000018435lsm12a8963.429Pygocentrus_nattereri
ENSPMAG00000005461lsm12a9966.857ENSPNAG00000004186lsm12b8966.857Pygocentrus_nattereri
ENSPMAG00000005461lsm12a9966.279ENSRNOG00000020894Lsm128866.279Rattus_norvegicus
ENSPMAG00000005461lsm12a9966.279ENSRBIG00000027910LSM128866.279Rhinopithecus_bieti
ENSPMAG00000005461lsm12a9966.279ENSRROG00000045530-9665.663Rhinopithecus_roxellana
ENSPMAG00000005461lsm12a9966.279ENSSBOG00000025310LSM128866.279Saimiri_boliviensis_boliviensis
ENSPMAG00000005461lsm12a7964.234ENSSHAG00000014914LSM128764.234Sarcophilus_harrisii
ENSPMAG00000005461lsm12a9966.286ENSSFOG00015009612lsm128966.286Scleropages_formosus
ENSPMAG00000005461lsm12a9966.286ENSSFOG00015020392lsm12a8966.286Scleropages_formosus
ENSPMAG00000005461lsm12a9967.429ENSSMAG00000008089lsm12b8967.429Scophthalmus_maximus
ENSPMAG00000005461lsm12a9968.000ENSSDUG00000012711lsm12b8968.000Seriola_dumerili
ENSPMAG00000005461lsm12a9968.000ENSSLDG00000007404lsm12b8968.000Seriola_lalandi_dorsalis
ENSPMAG00000005461lsm12a7665.909ENSSARG00000005537LSM128665.909Sorex_araneus
ENSPMAG00000005461lsm12a9966.474ENSSPUG00000011984LSM128966.474Sphenodon_punctatus
ENSPMAG00000005461lsm12a9968.000ENSSPAG00000017058lsm12b8968.000Stegastes_partitus
ENSPMAG00000005461lsm12a9966.279ENSSSCG00000032394LSM128866.279Sus_scrofa
ENSPMAG00000005461lsm12a9968.000ENSTRUG00000007121lsm12b8968.000Takifugu_rubripes
ENSPMAG00000005461lsm12a9967.429ENSTNIG00000014436lsm12b8967.429Tetraodon_nigroviridis
ENSPMAG00000005461lsm12a9966.279ENSTBEG00000012523-8866.279Tupaia_belangeri
ENSPMAG00000005461lsm12a9964.535ENSTBEG00000012392-8864.535Tupaia_belangeri
ENSPMAG00000005461lsm12a9966.279ENSTTRG00000010433LSM128866.279Tursiops_truncatus
ENSPMAG00000005461lsm12a9966.279ENSUAMG00000006313LSM128866.279Ursus_americanus
ENSPMAG00000005461lsm12a7963.504ENSUMAG00000012987LSM127863.504Ursus_maritimus
ENSPMAG00000005461lsm12a9961.628ENSVPAG00000011145LSM128861.628Vicugna_pacos
ENSPMAG00000005461lsm12a9966.279ENSVVUG00000017581LSM128866.279Vulpes_vulpes
ENSPMAG00000005461lsm12a8050.704ENSXETG00000003371lsm126650.704Xenopus_tropicalis
ENSPMAG00000005461lsm12a9967.429ENSXCOG00000003994lsm12b8967.429Xiphophorus_couchianus
ENSPMAG00000005461lsm12a9967.429ENSXMAG00000020950lsm12b8967.429Xiphophorus_maculatus