EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005530 (Gene tree)
Gene ID: -
Gene Symbol: polr3f
Alias: -
Full Name: polymerase (RNA) III (DNA directed) polypeptide F
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 11966 bases
Position: chrGL478038:2398-14363
Accession: ZDB-GENE-040426-972
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006115	RNA_pol_Rpc34	PF05158.12	1.1e-99	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006144	-	1042	-	ENSPMAP00000006115	314 (aa)	-	S4RLM9

Gene Model

Click here to download ENSPMAG00000005530's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005530's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005530	polr3f	100	80.063	ENSG00000132664	POLR3F	100	80.063	Homo_sapiens
ENSPMAG00000005530	polr3f	100	77.215	ENSAPOG00000008271	polr3f	100	77.215	Acanthochromis_polyacanthus
ENSPMAG00000005530	polr3f	100	80.063	ENSAMEG00000005222	POLR3F	100	80.063	Ailuropoda_melanoleuca
ENSPMAG00000005530	polr3f	100	72.930	ENSACIG00000006705	polr3f	100	72.930	Amphilophus_citrinellus
ENSPMAG00000005530	polr3f	100	77.215	ENSAOCG00000000687	polr3f	100	77.215	Amphiprion_ocellaris
ENSPMAG00000005530	polr3f	100	77.215	ENSAPEG00000015263	polr3f	100	77.215	Amphiprion_percula
ENSPMAG00000005530	polr3f	88	79.636	ENSATEG00000015539	polr3f	100	79.636	Anabas_testudineus
ENSPMAG00000005530	polr3f	88	82.909	ENSAPLG00000005533	POLR3F	100	82.909	Anas_platyrhynchos
ENSPMAG00000005530	polr3f	99	77.742	ENSACAG00000014293	POLR3F	100	77.742	Anolis_carolinensis
ENSPMAG00000005530	polr3f	100	80.380	ENSANAG00000026726	POLR3F	100	80.380	Aotus_nancymaae
ENSPMAG00000005530	polr3f	100	77.532	ENSACLG00000003615	polr3f	100	77.532	Astatotilapia_calliptera
ENSPMAG00000005530	polr3f	100	80.573	ENSAMXG00000036020	polr3f	100	80.573	Astyanax_mexicanus
ENSPMAG00000005530	polr3f	100	79.747	ENSBTAG00000008825	POLR3F	100	79.747	Bos_taurus
ENSPMAG00000005530	polr3f	98	34.951	WBGene00021112	W09C3.4	98	34.951	Caenorhabditis_elegans
ENSPMAG00000005530	polr3f	100	80.380	ENSCJAG00000005159	POLR3F	100	80.380	Callithrix_jacchus
ENSPMAG00000005530	polr3f	100	80.063	ENSCAFG00000005420	POLR3F	100	80.063	Canis_familiaris
ENSPMAG00000005530	polr3f	100	80.063	ENSCAFG00020027500	POLR3F	100	80.063	Canis_lupus_dingo
ENSPMAG00000005530	polr3f	100	79.747	ENSCHIG00000014743	POLR3F	100	79.747	Capra_hircus
ENSPMAG00000005530	polr3f	100	79.747	ENSTSYG00000004207	POLR3F	100	79.747	Carlito_syrichta
ENSPMAG00000005530	polr3f	94	45.763	ENSCAPG00000008423	POLR3F	100	45.763	Cavia_aperea
ENSPMAG00000005530	polr3f	100	80.380	ENSCPOG00000002400	POLR3F	100	80.380	Cavia_porcellus
ENSPMAG00000005530	polr3f	100	71.203	ENSCCAG00000021800	POLR3F	100	71.203	Cebus_capucinus
ENSPMAG00000005530	polr3f	100	79.747	ENSCATG00000019507	POLR3F	100	79.747	Cercocebus_atys
ENSPMAG00000005530	polr3f	100	79.747	ENSCLAG00000016296	POLR3F	100	79.747	Chinchilla_lanigera
ENSPMAG00000005530	polr3f	100	79.747	ENSCSAG00000011513	POLR3F	100	79.747	Chlorocebus_sabaeus
ENSPMAG00000005530	polr3f	73	81.119	ENSCHOG00000013268	POLR3F	73	81.119	Choloepus_hoffmanni
ENSPMAG00000005530	polr3f	88	81.818	ENSCPBG00000023473	POLR3F	100	81.818	Chrysemys_picta_bellii
ENSPMAG00000005530	polr3f	99	60.191	ENSCING00000001212	-	99	60.191	Ciona_intestinalis
ENSPMAG00000005530	polr3f	70	58.371	ENSCSAVG00000003340	-	96	62.722	Ciona_savignyi
ENSPMAG00000005530	polr3f	92	81.100	ENSCANG00000037390	POLR3F	100	81.100	Colobus_angolensis_palliatus
ENSPMAG00000005530	polr3f	100	79.747	ENSCGRG00001002032	Polr3f	100	79.747	Cricetulus_griseus_chok1gshd
ENSPMAG00000005530	polr3f	100	79.747	ENSCGRG00000010852	Polr3f	100	79.747	Cricetulus_griseus_crigri
ENSPMAG00000005530	polr3f	100	75.000	ENSCSEG00000001247	polr3f	100	75.000	Cynoglossus_semilaevis
ENSPMAG00000005530	polr3f	100	76.582	ENSCVAG00000007611	polr3f	100	76.582	Cyprinodon_variegatus
ENSPMAG00000005530	polr3f	100	80.255	ENSDARG00000012572	polr3f	100	80.255	Danio_rerio
ENSPMAG00000005530	polr3f	100	78.481	ENSDNOG00000010719	POLR3F	100	78.481	Dasypus_novemcinctus
ENSPMAG00000005530	polr3f	100	79.747	ENSDORG00000016352	Polr3f	100	79.747	Dipodomys_ordii
ENSPMAG00000005530	polr3f	96	49.502	FBgn0038951	CG5380	99	49.502	Drosophila_melanogaster
ENSPMAG00000005530	polr3f	89	49.281	ENSETEG00000015485	-	99	49.281	Echinops_telfairi
ENSPMAG00000005530	polr3f	100	78.662	ENSEBUG00000006783	polr3f	100	78.662	Eptatretus_burgeri
ENSPMAG00000005530	polr3f	100	80.063	ENSEASG00005002022	POLR3F	100	80.063	Equus_asinus_asinus
ENSPMAG00000005530	polr3f	100	80.063	ENSECAG00000009920	POLR3F	100	80.063	Equus_caballus
ENSPMAG00000005530	polr3f	80	64.758	ENSEEUG00000000184	POLR3F	80	64.758	Erinaceus_europaeus
ENSPMAG00000005530	polr3f	100	79.936	ENSELUG00000001558	polr3f	100	79.936	Esox_lucius
ENSPMAG00000005530	polr3f	100	80.063	ENSFCAG00000013828	POLR3F	100	80.063	Felis_catus
ENSPMAG00000005530	polr3f	88	82.182	ENSFALG00000007623	POLR3F	100	82.182	Ficedula_albicollis
ENSPMAG00000005530	polr3f	100	80.063	ENSFDAG00000002528	POLR3F	100	80.063	Fukomys_damarensis
ENSPMAG00000005530	polr3f	100	75.949	ENSFHEG00000006450	polr3f	100	75.949	Fundulus_heteroclitus
ENSPMAG00000005530	polr3f	100	82.484	ENSGALG00000008749	POLR3F	100	82.484	Gallus_gallus
ENSPMAG00000005530	polr3f	100	76.899	ENSGAFG00000003698	polr3f	100	76.899	Gambusia_affinis
ENSPMAG00000005530	polr3f	100	80.573	ENSGAGG00000006151	POLR3F	100	80.573	Gopherus_agassizii
ENSPMAG00000005530	polr3f	100	80.063	ENSGGOG00000011543	POLR3F	100	80.063	Gorilla_gorilla
ENSPMAG00000005530	polr3f	100	77.848	ENSHBUG00000013806	polr3f	100	77.848	Haplochromis_burtoni
ENSPMAG00000005530	polr3f	100	79.430	ENSHGLG00000011867	POLR3F	100	79.430	Heterocephalus_glaber_female
ENSPMAG00000005530	polr3f	100	79.430	ENSHGLG00100012577	POLR3F	100	79.430	Heterocephalus_glaber_male
ENSPMAG00000005530	polr3f	100	72.152	ENSHCOG00000011751	polr3f	100	72.152	Hippocampus_comes
ENSPMAG00000005530	polr3f	100	80.573	ENSIPUG00000013347	polr3f	100	80.573	Ictalurus_punctatus
ENSPMAG00000005530	polr3f	100	80.063	ENSSTOG00000013588	POLR3F	100	80.063	Ictidomys_tridecemlineatus
ENSPMAG00000005530	polr3f	100	79.747	ENSJJAG00000017513	Polr3f	100	79.747	Jaculus_jaculus
ENSPMAG00000005530	polr3f	88	74.909	ENSKMAG00000016495	polr3f	100	74.909	Kryptolebias_marmoratus
ENSPMAG00000005530	polr3f	74	81.034	ENSLBEG00000011998	polr3f	100	81.034	Labrus_bergylta
ENSPMAG00000005530	polr3f	100	82.484	ENSLACG00000009371	POLR3F	100	82.484	Latimeria_chalumnae
ENSPMAG00000005530	polr3f	100	81.529	ENSLOCG00000015701	polr3f	100	81.529	Lepisosteus_oculatus
ENSPMAG00000005530	polr3f	100	79.747	ENSLAFG00000004929	POLR3F	100	79.747	Loxodonta_africana
ENSPMAG00000005530	polr3f	100	79.747	ENSMFAG00000002227	POLR3F	100	79.747	Macaca_fascicularis
ENSPMAG00000005530	polr3f	88	81.818	ENSMMUG00000004143	POLR3F	100	81.818	Macaca_mulatta
ENSPMAG00000005530	polr3f	100	79.747	ENSMNEG00000033404	POLR3F	100	79.747	Macaca_nemestrina
ENSPMAG00000005530	polr3f	100	79.747	ENSMLEG00000021905	POLR3F	100	79.747	Mandrillus_leucophaeus
ENSPMAG00000005530	polr3f	100	77.215	ENSMAMG00000017975	polr3f	100	77.215	Mastacembelus_armatus
ENSPMAG00000005530	polr3f	100	77.215	ENSMZEG00005015134	polr3f	100	77.215	Maylandia_zebra
ENSPMAG00000005530	polr3f	100	81.847	ENSMGAG00000006691	POLR3F	100	81.847	Meleagris_gallopavo
ENSPMAG00000005530	polr3f	100	79.747	ENSMAUG00000020176	Polr3f	100	79.747	Mesocricetus_auratus
ENSPMAG00000005530	polr3f	100	80.063	ENSMICG00000044519	POLR3F	100	80.063	Microcebus_murinus
ENSPMAG00000005530	polr3f	100	79.747	ENSMOCG00000018352	Polr3f	100	79.747	Microtus_ochrogaster
ENSPMAG00000005530	polr3f	94	80.135	ENSMMOG00000018477	polr3f	100	80.135	Mola_mola
ENSPMAG00000005530	polr3f	100	79.114	ENSMODG00000005624	POLR3F	100	79.114	Monodelphis_domestica
ENSPMAG00000005530	polr3f	100	77.848	ENSMALG00000006685	polr3f	100	77.848	Monopterus_albus
ENSPMAG00000005530	polr3f	100	79.747	MGP_CAROLIEiJ_G0024385	Polr3f	100	79.747	Mus_caroli
ENSPMAG00000005530	polr3f	100	79.747	ENSMUSG00000027427	Polr3f	100	79.747	Mus_musculus
ENSPMAG00000005530	polr3f	100	79.747	MGP_PahariEiJ_G0025829	Polr3f	100	79.747	Mus_pahari
ENSPMAG00000005530	polr3f	100	79.747	MGP_SPRETEiJ_G0025304	Polr3f	100	79.747	Mus_spretus
ENSPMAG00000005530	polr3f	100	61.846	ENSMPUG00000001252	-	100	61.846	Mustela_putorius_furo
ENSPMAG00000005530	polr3f	100	80.063	ENSMLUG00000014844	POLR3F	100	80.063	Myotis_lucifugus
ENSPMAG00000005530	polr3f	100	79.430	ENSNGAG00000010898	Polr3f	100	79.430	Nannospalax_galili
ENSPMAG00000005530	polr3f	100	78.165	ENSNBRG00000020796	polr3f	100	78.165	Neolamprologus_brichardi
ENSPMAG00000005530	polr3f	100	80.063	ENSNLEG00000009778	POLR3F	100	80.063	Nomascus_leucogenys
ENSPMAG00000005530	polr3f	94	75.932	ENSMEUG00000010320	POLR3F	100	75.932	Notamacropus_eugenii
ENSPMAG00000005530	polr3f	100	79.430	ENSOPRG00000003385	POLR3F	100	79.430	Ochotona_princeps
ENSPMAG00000005530	polr3f	100	79.430	ENSODEG00000011521	POLR3F	100	79.430	Octodon_degus
ENSPMAG00000005530	polr3f	100	77.215	ENSONIG00000006858	polr3f	100	77.215	Oreochromis_niloticus
ENSPMAG00000005530	polr3f	100	79.747	ENSOANG00000001253	POLR3F	100	79.747	Ornithorhynchus_anatinus
ENSPMAG00000005530	polr3f	100	80.063	ENSOCUG00000015067	POLR3F	100	80.063	Oryctolagus_cuniculus
ENSPMAG00000005530	polr3f	100	76.582	ENSORLG00000022412	polr3f	100	76.582	Oryzias_latipes
ENSPMAG00000005530	polr3f	100	76.582	ENSORLG00020021944	polr3f	100	76.582	Oryzias_latipes_hni
ENSPMAG00000005530	polr3f	100	79.114	ENSOGAG00000002916	POLR3F	100	79.114	Otolemur_garnettii
ENSPMAG00000005530	polr3f	100	79.747	ENSOARG00000000315	-	100	79.747	Ovis_aries
ENSPMAG00000005530	polr3f	100	48.101	ENSOARG00000008647	-	100	48.101	Ovis_aries
ENSPMAG00000005530	polr3f	100	80.063	ENSPPAG00000036681	POLR3F	100	80.063	Pan_paniscus
ENSPMAG00000005530	polr3f	100	80.063	ENSPPRG00000024604	POLR3F	100	80.063	Panthera_pardus
ENSPMAG00000005530	polr3f	100	80.063	ENSPTIG00000020292	POLR3F	100	80.063	Panthera_tigris_altaica
ENSPMAG00000005530	polr3f	100	80.063	ENSPTRG00000013287	POLR3F	100	80.063	Pan_troglodytes
ENSPMAG00000005530	polr3f	100	79.747	ENSPANG00000025015	POLR3F	100	79.747	Papio_anubis
ENSPMAG00000005530	polr3f	100	80.892	ENSPKIG00000004427	polr3f	100	80.892	Paramormyrops_kingsleyae
ENSPMAG00000005530	polr3f	88	82.545	ENSPSIG00000016613	POLR3F	100	82.545	Pelodiscus_sinensis
ENSPMAG00000005530	polr3f	100	50.633	ENSPMGG00000018350	polr3f	100	51.582	Periophthalmus_magnuspinnatus
ENSPMAG00000005530	polr3f	100	79.747	ENSPEMG00000006966	Polr3f	100	79.747	Peromyscus_maniculatus_bairdii
ENSPMAG00000005530	polr3f	100	78.797	ENSPCIG00000000908	POLR3F	85	78.797	Phascolarctos_cinereus
ENSPMAG00000005530	polr3f	100	76.266	ENSPFOG00000018334	polr3f	100	76.266	Poecilia_formosa
ENSPMAG00000005530	polr3f	100	76.266	ENSPLAG00000021803	polr3f	100	76.266	Poecilia_latipinna
ENSPMAG00000005530	polr3f	100	76.266	ENSPMEG00000013150	polr3f	100	76.266	Poecilia_mexicana
ENSPMAG00000005530	polr3f	100	76.266	ENSPREG00000005278	polr3f	100	76.266	Poecilia_reticulata
ENSPMAG00000005530	polr3f	100	80.063	ENSPPYG00000010737	POLR3F	100	80.063	Pongo_abelii
ENSPMAG00000005530	polr3f	65	81.757	ENSPCAG00000004893	POLR3F	71	81.757	Procavia_capensis
ENSPMAG00000005530	polr3f	100	80.063	ENSPCOG00000004543	POLR3F	100	80.063	Propithecus_coquereli
ENSPMAG00000005530	polr3f	100	80.063	ENSPVAG00000000403	POLR3F	100	80.063	Pteropus_vampyrus
ENSPMAG00000005530	polr3f	100	77.848	ENSPNYG00000016276	polr3f	100	77.848	Pundamilia_nyererei
ENSPMAG00000005530	polr3f	100	81.847	ENSPNAG00000005164	polr3f	100	81.847	Pygocentrus_nattereri
ENSPMAG00000005530	polr3f	100	79.747	ENSRNOG00000007548	Polr3f	85	79.747	Rattus_norvegicus
ENSPMAG00000005530	polr3f	100	79.747	ENSRBIG00000021268	POLR3F	100	79.747	Rhinopithecus_bieti
ENSPMAG00000005530	polr3f	100	79.747	ENSRROG00000039911	POLR3F	100	79.747	Rhinopithecus_roxellana
ENSPMAG00000005530	polr3f	63	30.097	YNR003C	RPC34	64	30.097	Saccharomyces_cerevisiae
ENSPMAG00000005530	polr3f	100	80.380	ENSSBOG00000018207	POLR3F	100	80.380	Saimiri_boliviensis_boliviensis
ENSPMAG00000005530	polr3f	100	63.091	ENSSHAG00000018160	POLR3F	100	63.009	Sarcophilus_harrisii
ENSPMAG00000005530	polr3f	100	81.529	ENSSFOG00015022433	polr3f	100	81.529	Scleropages_formosus
ENSPMAG00000005530	polr3f	100	76.266	ENSSMAG00000021029	polr3f	100	76.266	Scophthalmus_maximus
ENSPMAG00000005530	polr3f	100	69.620	ENSSDUG00000022435	polr3f	100	69.620	Seriola_dumerili
ENSPMAG00000005530	polr3f	100	78.165	ENSSLDG00000012761	polr3f	100	78.165	Seriola_lalandi_dorsalis
ENSPMAG00000005530	polr3f	100	72.152	ENSSARG00000006039	POLR3F	100	72.152	Sorex_araneus
ENSPMAG00000005530	polr3f	100	80.255	ENSSPUG00000001873	POLR3F	100	80.255	Sphenodon_punctatus
ENSPMAG00000005530	polr3f	100	69.620	ENSSPAG00000002092	polr3f	100	69.620	Stegastes_partitus
ENSPMAG00000005530	polr3f	100	79.747	ENSSSCG00000007095	POLR3F	100	83.190	Sus_scrofa
ENSPMAG00000005530	polr3f	100	81.210	ENSTGUG00000005839	POLR3F	100	81.210	Taeniopygia_guttata
ENSPMAG00000005530	polr3f	100	76.582	ENSTRUG00000012101	polr3f	100	76.582	Takifugu_rubripes
ENSPMAG00000005530	polr3f	100	75.633	ENSTNIG00000006456	polr3f	100	75.633	Tetraodon_nigroviridis
ENSPMAG00000005530	polr3f	100	65.823	ENSTBEG00000007921	POLR3F	100	65.823	Tupaia_belangeri
ENSPMAG00000005530	polr3f	100	79.747	ENSTTRG00000002580	POLR3F	100	79.747	Tursiops_truncatus
ENSPMAG00000005530	polr3f	53	78.313	ENSUAMG00000024166	POLR3F	100	78.313	Ursus_americanus
ENSPMAG00000005530	polr3f	100	79.747	ENSUMAG00000024944	POLR3F	100	79.747	Ursus_maritimus
ENSPMAG00000005530	polr3f	100	80.063	ENSVPAG00000009063	POLR3F	100	80.063	Vicugna_pacos
ENSPMAG00000005530	polr3f	100	80.063	ENSVVUG00000012925	POLR3F	100	80.063	Vulpes_vulpes
ENSPMAG00000005530	polr3f	100	78.981	ENSXETG00000024898	polr3f	100	78.981	Xenopus_tropicalis
ENSPMAG00000005530	polr3f	88	78.909	ENSXCOG00000010301	polr3f	100	78.909	Xiphophorus_couchianus
ENSPMAG00000005530	polr3f	100	76.582	ENSXMAG00000004604	polr3f	100	76.582	Xiphophorus_maculatus