EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005533 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 38541 bases
Position: chrGL480276:11135-49675
Accession: 7658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006129	MIF4G_like	PF09088.11	2.9e-31	1	1
ENSPMAP00000006129	MIF4G_like_2	PF09090.11	1.7e-60	1	1
ENSPMAP00000006129	MIF4G	PF02854.19	2.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006158	NCBP1-201	2586	-	ENSPMAP00000006129	793 (aa)	-	S4RLP3

Gene Model

Click here to download ENSPMAG00000005533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005533	NCBP1	100	67.746	ENSG00000136937	NCBP1	100	67.746	Homo_sapiens
ENSPMAG00000005533	NCBP1	99	68.914	ENSAPOG00000008002	NCBP1	99	68.914	Acanthochromis_polyacanthus
ENSPMAG00000005533	NCBP1	100	67.621	ENSAMEG00000004763	NCBP1	100	67.621	Ailuropoda_melanoleuca
ENSPMAG00000005533	NCBP1	99	68.625	ENSACIG00000000274	NCBP1	99	68.625	Amphilophus_citrinellus
ENSPMAG00000005533	NCBP1	99	68.914	ENSAOCG00000021148	NCBP1	99	68.914	Amphiprion_ocellaris
ENSPMAG00000005533	NCBP1	99	68.914	ENSAPEG00000001701	NCBP1	99	68.914	Amphiprion_percula
ENSPMAG00000005533	NCBP1	99	69.039	ENSATEG00000006929	NCBP1	99	69.039	Anabas_testudineus
ENSPMAG00000005533	NCBP1	95	66.536	ENSAPLG00000016318	NCBP1	100	66.797	Anas_platyrhynchos
ENSPMAG00000005533	NCBP1	100	66.012	ENSACAG00000004409	NCBP1	87	66.667	Anolis_carolinensis
ENSPMAG00000005533	NCBP1	100	66.127	ENSANAG00000025744	NCBP1	99	66.940	Aotus_nancymaae
ENSPMAG00000005533	NCBP1	99	68.625	ENSACLG00000014812	NCBP1	99	68.625	Astatotilapia_calliptera
ENSPMAG00000005533	NCBP1	99	68.244	ENSAMXG00000016364	NCBP1	99	68.493	Astyanax_mexicanus
ENSPMAG00000005533	NCBP1	100	67.746	ENSBTAG00000009732	NCBP1	99	78.078	Bos_taurus
ENSPMAG00000005533	NCBP1	99	33.701	WBGene00018156	ncbp-1	99	33.701	Caenorhabditis_elegans
ENSPMAG00000005533	NCBP1	100	67.746	ENSCJAG00000010840	NCBP1	100	76.905	Callithrix_jacchus
ENSPMAG00000005533	NCBP1	100	67.746	ENSCAFG00000002445	NCBP1	100	67.746	Canis_familiaris
ENSPMAG00000005533	NCBP1	98	68.193	ENSCAFG00020017997	NCBP1	96	78.607	Canis_lupus_dingo
ENSPMAG00000005533	NCBP1	100	67.621	ENSCHIG00000020139	NCBP1	100	67.621	Capra_hircus
ENSPMAG00000005533	NCBP1	51	78.607	ENSTSYG00000011914	NCBP1	98	80.063	Carlito_syrichta
ENSPMAG00000005533	NCBP1	81	58.282	ENSCAPG00000014252	NCBP1	90	58.282	Cavia_aperea
ENSPMAG00000005533	NCBP1	95	67.670	ENSCPOG00000012573	NCBP1	99	67.670	Cavia_porcellus
ENSPMAG00000005533	NCBP1	100	67.746	ENSCCAG00000032297	NCBP1	100	67.746	Cebus_capucinus
ENSPMAG00000005533	NCBP1	100	67.746	ENSCATG00000010052	NCBP1	100	67.746	Cercocebus_atys
ENSPMAG00000005533	NCBP1	100	67.746	ENSCLAG00000014339	NCBP1	100	67.746	Chinchilla_lanigera
ENSPMAG00000005533	NCBP1	100	67.746	ENSCSAG00000010929	NCBP1	100	67.746	Chlorocebus_sabaeus
ENSPMAG00000005533	NCBP1	76	80.000	ENSCHOG00000010332	NCBP1	78	74.790	Choloepus_hoffmanni
ENSPMAG00000005533	NCBP1	100	67.459	ENSCPBG00000024344	NCBP1	92	80.435	Chrysemys_picta_bellii
ENSPMAG00000005533	NCBP1	99	50.620	ENSCING00000008990	-	98	51.072	Ciona_intestinalis
ENSPMAG00000005533	NCBP1	99	49.312	ENSCSAVG00000005300	-	99	54.639	Ciona_savignyi
ENSPMAG00000005533	NCBP1	100	67.746	ENSCANG00000036913	NCBP1	100	67.746	Colobus_angolensis_palliatus
ENSPMAG00000005533	NCBP1	100	67.669	ENSCGRG00001015771	Ncbp1	100	67.669	Cricetulus_griseus_chok1gshd
ENSPMAG00000005533	NCBP1	98	68.066	ENSCGRG00000010311	Ncbp1	99	68.025	Cricetulus_griseus_crigri
ENSPMAG00000005533	NCBP1	99	67.521	ENSCSEG00000012377	NCBP1	99	67.521	Cynoglossus_semilaevis
ENSPMAG00000005533	NCBP1	99	67.291	ENSCVAG00000008795	NCBP1	99	68.040	Cyprinodon_variegatus
ENSPMAG00000005533	NCBP1	100	67.372	ENSDNOG00000006885	NCBP1	100	67.372	Dasypus_novemcinctus
ENSPMAG00000005533	NCBP1	100	64.134	ENSDORG00000013652	Ncbp1	100	64.134	Dipodomys_ordii
ENSPMAG00000005533	NCBP1	100	50.371	FBgn0022942	Cbp80	100	50.309	Drosophila_melanogaster
ENSPMAG00000005533	NCBP1	86	31.524	FBgn0038887	CG7907	88	31.524	Drosophila_melanogaster
ENSPMAG00000005533	NCBP1	89	61.538	ENSETEG00000009705	NCBP1	89	61.538	Echinops_telfairi
ENSPMAG00000005533	NCBP1	100	70.690	ENSEBUG00000008386	NCBP1	100	70.690	Eptatretus_burgeri
ENSPMAG00000005533	NCBP1	100	67.248	ENSEASG00005022795	NCBP1	100	67.248	Equus_asinus_asinus
ENSPMAG00000005533	NCBP1	100	67.372	ENSECAG00000013847	NCBP1	100	67.372	Equus_caballus
ENSPMAG00000005533	NCBP1	96	63.802	ENSEEUG00000015973	NCBP1	99	64.109	Erinaceus_europaeus
ENSPMAG00000005533	NCBP1	99	66.996	ENSELUG00000022519	NCBP1	99	67.738	Esox_lucius
ENSPMAG00000005533	NCBP1	100	67.621	ENSFCAG00000001206	NCBP1	100	67.621	Felis_catus
ENSPMAG00000005533	NCBP1	98	67.380	ENSFALG00000001193	NCBP1	99	67.758	Ficedula_albicollis
ENSPMAG00000005533	NCBP1	100	67.621	ENSFDAG00000010864	NCBP1	100	67.621	Fukomys_damarensis
ENSPMAG00000005533	NCBP1	99	68.539	ENSFHEG00000000655	NCBP1	99	68.539	Fundulus_heteroclitus
ENSPMAG00000005533	NCBP1	99	68.035	ENSGMOG00000008653	NCBP1	99	68.035	Gadus_morhua
ENSPMAG00000005533	NCBP1	98	67.726	ENSGALG00000002087	NCBP1	100	67.662	Gallus_gallus
ENSPMAG00000005533	NCBP1	99	68.342	ENSGAFG00000017787	NCBP1	99	68.342	Gambusia_affinis
ENSPMAG00000005533	NCBP1	99	67.497	ENSGACG00000016772	NCBP1	98	67.497	Gasterosteus_aculeatus
ENSPMAG00000005533	NCBP1	98	68.142	ENSGAGG00000019483	NCBP1	99	68.647	Gopherus_agassizii
ENSPMAG00000005533	NCBP1	100	67.746	ENSGGOG00000001376	NCBP1	100	67.746	Gorilla_gorilla
ENSPMAG00000005533	NCBP1	99	68.625	ENSHBUG00000020843	NCBP1	99	68.625	Haplochromis_burtoni
ENSPMAG00000005533	NCBP1	100	67.746	ENSHGLG00000001882	NCBP1	100	67.746	Heterocephalus_glaber_female
ENSPMAG00000005533	NCBP1	100	59.301	ENSHGLG00000018112	-	99	59.645	Heterocephalus_glaber_female
ENSPMAG00000005533	NCBP1	100	67.746	ENSHGLG00100013014	NCBP1	100	67.746	Heterocephalus_glaber_male
ENSPMAG00000005533	NCBP1	100	59.051	ENSHGLG00100017373	-	99	59.391	Heterocephalus_glaber_male
ENSPMAG00000005533	NCBP1	74	60.403	ENSHCOG00000000204	NCBP1	87	60.403	Hippocampus_comes
ENSPMAG00000005533	NCBP1	99	67.955	ENSIPUG00000007275	ncbp1	87	80.652	Ictalurus_punctatus
ENSPMAG00000005533	NCBP1	100	67.746	ENSSTOG00000002695	NCBP1	100	67.746	Ictidomys_tridecemlineatus
ENSPMAG00000005533	NCBP1	99	68.125	ENSKMAG00000003594	NCBP1	92	79.130	Kryptolebias_marmoratus
ENSPMAG00000005533	NCBP1	99	66.995	ENSLBEG00000011661	NCBP1	99	66.995	Labrus_bergylta
ENSPMAG00000005533	NCBP1	100	61.765	ENSLACG00000013955	NCBP1	100	62.255	Latimeria_chalumnae
ENSPMAG00000005533	NCBP1	99	58.045	ENSLOCG00000009579	NCBP1	99	58.045	Lepisosteus_oculatus
ENSPMAG00000005533	NCBP1	100	67.497	ENSLAFG00000005999	NCBP1	100	67.497	Loxodonta_africana
ENSPMAG00000005533	NCBP1	100	67.746	ENSMFAG00000030994	NCBP1	100	67.746	Macaca_fascicularis
ENSPMAG00000005533	NCBP1	98	67.975	ENSMMUG00000012281	NCBP1	99	67.975	Macaca_mulatta
ENSPMAG00000005533	NCBP1	100	67.746	ENSMNEG00000042790	NCBP1	100	67.746	Macaca_nemestrina
ENSPMAG00000005533	NCBP1	100	67.746	ENSMLEG00000030374	NCBP1	100	67.746	Mandrillus_leucophaeus
ENSPMAG00000005533	NCBP1	99	67.284	ENSMAMG00000014806	NCBP1	99	67.503	Mastacembelus_armatus
ENSPMAG00000005533	NCBP1	97	68.428	ENSMZEG00005009290	-	99	68.428	Maylandia_zebra
ENSPMAG00000005533	NCBP1	99	68.625	ENSMZEG00005003469	NCBP1	99	68.625	Maylandia_zebra
ENSPMAG00000005533	NCBP1	100	66.083	ENSMAUG00000020583	Ncbp1	99	67.898	Mesocricetus_auratus
ENSPMAG00000005533	NCBP1	100	67.621	ENSMICG00000012682	NCBP1	100	67.621	Microcebus_murinus
ENSPMAG00000005533	NCBP1	100	67.544	ENSMOCG00000015818	Ncbp1	100	67.544	Microtus_ochrogaster
ENSPMAG00000005533	NCBP1	90	65.655	ENSMMOG00000002610	NCBP1	99	66.389	Mola_mola
ENSPMAG00000005533	NCBP1	100	66.625	ENSMODG00000003202	NCBP1	99	66.625	Monodelphis_domestica
ENSPMAG00000005533	NCBP1	99	68.664	ENSMALG00000003547	NCBP1	99	68.664	Monopterus_albus
ENSPMAG00000005533	NCBP1	100	67.669	MGP_CAROLIEiJ_G0025982	Ncbp1	100	67.537	Mus_caroli
ENSPMAG00000005533	NCBP1	100	67.669	ENSMUSG00000028330	Ncbp1	100	67.537	Mus_musculus
ENSPMAG00000005533	NCBP1	100	67.544	MGP_PahariEiJ_G0028318	Ncbp1	100	67.544	Mus_pahari
ENSPMAG00000005533	NCBP1	100	67.669	MGP_SPRETEiJ_G0026945	Ncbp1	100	67.537	Mus_spretus
ENSPMAG00000005533	NCBP1	100	67.746	ENSMPUG00000006399	NCBP1	100	67.746	Mustela_putorius_furo
ENSPMAG00000005533	NCBP1	98	67.342	ENSMLUG00000015201	NCBP1	100	67.342	Myotis_lucifugus
ENSPMAG00000005533	NCBP1	100	67.669	ENSNGAG00000014101	Ncbp1	100	66.339	Nannospalax_galili
ENSPMAG00000005533	NCBP1	75	80.786	ENSNBRG00000014674	NCBP1	96	80.786	Neolamprologus_brichardi
ENSPMAG00000005533	NCBP1	100	67.746	ENSNLEG00000016909	NCBP1	100	67.746	Nomascus_leucogenys
ENSPMAG00000005533	NCBP1	84	74.944	ENSMEUG00000010672	NCBP1	85	74.944	Notamacropus_eugenii
ENSPMAG00000005533	NCBP1	79	85.294	ENSOPRG00000002144	-	83	85.294	Ochotona_princeps
ENSPMAG00000005533	NCBP1	100	67.621	ENSODEG00000003232	NCBP1	100	67.621	Octodon_degus
ENSPMAG00000005533	NCBP1	99	68.500	ENSONIG00000001502	NCBP1	99	68.500	Oreochromis_niloticus
ENSPMAG00000005533	NCBP1	79	67.666	ENSOANG00000001918	NCBP1	100	67.666	Ornithorhynchus_anatinus
ENSPMAG00000005533	NCBP1	98	66.920	ENSOCUG00000013853	NCBP1	97	66.920	Oryctolagus_cuniculus
ENSPMAG00000005533	NCBP1	99	68.075	ENSORLG00000011008	NCBP1	99	68.075	Oryzias_latipes
ENSPMAG00000005533	NCBP1	99	68.199	ENSORLG00020017455	NCBP1	99	68.199	Oryzias_latipes_hni
ENSPMAG00000005533	NCBP1	99	68.075	ENSORLG00015012127	NCBP1	99	68.075	Oryzias_latipes_hsok
ENSPMAG00000005533	NCBP1	99	67.578	ENSOMEG00000020698	NCBP1	99	67.578	Oryzias_melastigma
ENSPMAG00000005533	NCBP1	100	67.870	ENSOGAG00000013888	NCBP1	100	67.870	Otolemur_garnettii
ENSPMAG00000005533	NCBP1	100	67.621	ENSOARG00000011233	NCBP1	100	67.621	Ovis_aries
ENSPMAG00000005533	NCBP1	100	67.746	ENSPPAG00000026462	NCBP1	100	67.746	Pan_paniscus
ENSPMAG00000005533	NCBP1	100	67.746	ENSPPRG00000022574	NCBP1	100	67.746	Panthera_pardus
ENSPMAG00000005533	NCBP1	100	67.746	ENSPTIG00000018507	NCBP1	100	67.746	Panthera_tigris_altaica
ENSPMAG00000005533	NCBP1	100	67.746	ENSPTRG00000021167	NCBP1	100	67.746	Pan_troglodytes
ENSPMAG00000005533	NCBP1	100	67.746	ENSPANG00000025591	NCBP1	100	67.746	Papio_anubis
ENSPMAG00000005533	NCBP1	100	66.584	ENSPKIG00000015861	NCBP1	87	80.000	Paramormyrops_kingsleyae
ENSPMAG00000005533	NCBP1	64	61.390	ENSPSIG00000009558	NCBP1	99	62.548	Pelodiscus_sinensis
ENSPMAG00000005533	NCBP1	99	66.125	ENSPMGG00000020476	NCBP1	99	66.125	Periophthalmus_magnuspinnatus
ENSPMAG00000005533	NCBP1	100	67.419	ENSPEMG00000020105	Ncbp1	100	67.419	Peromyscus_maniculatus_bairdii
ENSPMAG00000005533	NCBP1	100	66.625	ENSPCIG00000015800	NCBP1	99	72.926	Phascolarctos_cinereus
ENSPMAG00000005533	NCBP1	99	68.075	ENSPFOG00000004158	NCBP1	99	68.323	Poecilia_formosa
ENSPMAG00000005533	NCBP1	99	68.204	ENSPLAG00000020002	NCBP1	99	68.454	Poecilia_latipinna
ENSPMAG00000005533	NCBP1	99	68.454	ENSPMEG00000019821	NCBP1	99	68.703	Poecilia_mexicana
ENSPMAG00000005533	NCBP1	99	67.746	ENSPREG00000006035	NCBP1	99	67.995	Poecilia_reticulata
ENSPMAG00000005533	NCBP1	100	67.746	ENSPPYG00000019426	NCBP1	100	67.746	Pongo_abelii
ENSPMAG00000005533	NCBP1	84	81.034	ENSPCAG00000009943	NCBP1	85	81.034	Procavia_capensis
ENSPMAG00000005533	NCBP1	81	78.289	ENSPCOG00000020024	NCBP1	98	78.289	Propithecus_coquereli
ENSPMAG00000005533	NCBP1	100	67.621	ENSPVAG00000005924	NCBP1	100	67.621	Pteropus_vampyrus
ENSPMAG00000005533	NCBP1	90	66.992	ENSPNYG00000002140	NCBP1	99	66.992	Pundamilia_nyererei
ENSPMAG00000005533	NCBP1	99	68.408	ENSPNAG00000027753	NCBP1	99	68.408	Pygocentrus_nattereri
ENSPMAG00000005533	NCBP1	100	67.544	ENSRNOG00000023605	Ncbp1	100	67.544	Rattus_norvegicus
ENSPMAG00000005533	NCBP1	100	67.746	ENSRBIG00000043175	NCBP1	100	67.746	Rhinopithecus_bieti
ENSPMAG00000005533	NCBP1	100	67.746	ENSRROG00000029767	NCBP1	100	67.746	Rhinopithecus_roxellana
ENSPMAG00000005533	NCBP1	100	67.746	ENSSBOG00000019378	NCBP1	98	78.293	Saimiri_boliviensis_boliviensis
ENSPMAG00000005533	NCBP1	65	70.175	ENSSHAG00000015882	NCBP1	68	70.614	Sarcophilus_harrisii
ENSPMAG00000005533	NCBP1	98	68.153	ENSSFOG00015001872	NCBP1	100	67.669	Scleropages_formosus
ENSPMAG00000005533	NCBP1	99	67.915	ENSSMAG00000007463	NCBP1	99	67.915	Scophthalmus_maximus
ENSPMAG00000005533	NCBP1	99	68.467	ENSSDUG00000007019	NCBP1	99	68.467	Seriola_dumerili
ENSPMAG00000005533	NCBP1	99	68.125	ENSSLDG00000021924	NCBP1	99	68.125	Seriola_lalandi_dorsalis
ENSPMAG00000005533	NCBP1	85	60.849	ENSSARG00000007274	NCBP1	86	60.849	Sorex_araneus
ENSPMAG00000005533	NCBP1	100	61.076	ENSSPUG00000008609	NCBP1	100	60.000	Sphenodon_punctatus
ENSPMAG00000005533	NCBP1	99	69.039	ENSSPAG00000012550	NCBP1	99	69.039	Stegastes_partitus
ENSPMAG00000005533	NCBP1	100	67.621	ENSSSCG00000005366	NCBP1	100	67.621	Sus_scrofa
ENSPMAG00000005533	NCBP1	100	62.995	ENSTGUG00000001472	NCBP1	100	63.366	Taeniopygia_guttata
ENSPMAG00000005533	NCBP1	99	68.539	ENSTRUG00000005287	NCBP1	99	68.539	Takifugu_rubripes
ENSPMAG00000005533	NCBP1	100	65.380	ENSTBEG00000004035	NCBP1	100	65.380	Tupaia_belangeri
ENSPMAG00000005533	NCBP1	88	75.122	ENSTTRG00000000507	NCBP1	88	75.122	Tursiops_truncatus
ENSPMAG00000005533	NCBP1	100	67.621	ENSUAMG00000005471	NCBP1	100	67.621	Ursus_americanus
ENSPMAG00000005533	NCBP1	96	66.839	ENSUMAG00000011865	NCBP1	100	66.839	Ursus_maritimus
ENSPMAG00000005533	NCBP1	100	64.010	ENSVPAG00000010537	NCBP1	100	64.010	Vicugna_pacos
ENSPMAG00000005533	NCBP1	100	67.746	ENSVVUG00000019725	NCBP1	100	67.746	Vulpes_vulpes
ENSPMAG00000005533	NCBP1	100	63.806	ENSXETG00000010179	ncbp1	100	63.806	Xenopus_tropicalis
ENSPMAG00000005533	NCBP1	99	67.955	ENSXMAG00000018253	NCBP1	99	68.204	Xiphophorus_maculatus