EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005561 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: -
Full Name: pre-mRNA processing factor 38A
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 1830 bases
Position: chrGL476888:182281-184110
Accession: ZDB-GENE-040801-225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006125	PRP38	PF03371.15	4.4e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006154	-	411	-	ENSPMAP00000006125	137 (aa)	-	S4RLN9

Gene Model

Click here to download ENSPMAG00000005561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005561	prpf38a	100	90.511	ENSELUG00000021094	prpf38a	51	85.517	Esox_lucius
ENSPMAG00000005561	prpf38a	100	89.781	ENSHBUG00000020572	prpf38a	58	89.781	Haplochromis_burtoni
ENSPMAG00000005561	prpf38a	80	77.982	ENSMMUG00000042190	-	97	77.982	Macaca_mulatta
ENSPMAG00000005561	prpf38a	100	86.131	ENSMAUG00000018029	-	52	86.131	Mesocricetus_auratus
ENSPMAG00000005561	prpf38a	100	90.511	MGP_SPRETEiJ_G0027238	Prpf38a	67	90.511	Mus_spretus
ENSPMAG00000005561	prpf38a	100	91.241	ENSOPRG00000008985	PRPF38A	57	91.241	Ochotona_princeps