EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000005571 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 7428 bases
Position: chrGL487177:1661-9088
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006138	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006167	-	405	-	ENSPMAP00000006138	135 (aa)	-	S4RLQ2

Gene Model

Click here to download ENSPMAG00000005571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000005571	-	86	87.931	ENSPMAG00000000531	-	64	87.931
ENSPMAG00000005571	-	86	50.862	ENSPMAG00000004724	arl2	63	50.862
ENSPMAG00000005571	-	86	59.664	ENSPMAG00000010222	ARF6	66	59.664
ENSPMAG00000005571	-	86	86.207	ENSPMAG00000009600	arf4a	65	86.207
ENSPMAG00000005571	-	82	33.333	ENSPMAG00000003593	sar1b	57	33.333
ENSPMAG00000005571	-	86	49.138	ENSPMAG00000009519	-	64	49.138
ENSPMAG00000005571	-	90	44.444	ENSPMAG00000010406	ARL4A	63	44.444
ENSPMAG00000005571	-	86	87.931	ENSPMAG00000003819	-	64	87.931
ENSPMAG00000005571	-	96	57.252	ENSPMAG00000002070	arl1	72	57.252
ENSPMAG00000005571	-	86	87.931	ENSPMAG00000002035	arf1	64	87.931
ENSPMAG00000005571	-	82	33.036	ENSPMAG00000007507	arl8ba	60	33.036
ENSPMAG00000005571	-	86	49.587	ENSPMAG00000010027	ARL4A	61	49.587
ENSPMAG00000005571	-	82	51.351	ENSPMAG00000006880	arl8	62	51.351

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005571	-	87	89.744	ENSCAFG00000001726	ARF5	66	88.983	Canis_familiaris
ENSPMAG00000005571	-	87	89.744	ENSELUG00000019582	-	65	89.744	Esox_lucius
ENSPMAG00000005571	-	87	89.831	ENSGALG00000043476	-	78	89.831	Gallus_gallus
ENSPMAG00000005571	-	100	79.259	ENSKMAG00000008864	-	79	79.259	Kryptolebias_marmoratus
ENSPMAG00000005571	-	92	82.540	ENSLACG00000012168	-	80	82.540	Latimeria_chalumnae
ENSPMAG00000005571	-	84	92.920	ENSMGAG00000008562	-	86	92.920	Meleagris_gallopavo
ENSPMAG00000005571	-	100	79.259	ENSORLG00020003354	-	78	79.259	Oryzias_latipes_hni
ENSPMAG00000005571	-	87	88.034	ENSORLG00015002471	-	58	88.034	Oryzias_latipes_hsok
ENSPMAG00000005571	-	100	78.519	ENSSDUG00000014675	-	74	78.519	Seriola_dumerili
ENSPMAG00000005571	-	84	77.876	ENSSLDG00000005491	-	98	77.876	Seriola_lalandi_dorsalis
ENSPMAG00000005571	-	100	82.222	ENSSPUG00000004465	-	74	82.222	Sphenodon_punctatus
ENSPMAG00000005571	-	100	79.259	ENSTBEG00000007415	-	88	79.259	Tupaia_belangeri