EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPMAG00000005583 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: -
Full Name: splicing factor proline/glutamine-rich
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 12449 bases
Position: chrGL476888:239134-251582
Accession: ZDB-GENE-040426-2452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006185	RRM_1	PF00076.22	2.6e-28	1	2
ENSPMAP00000006185	RRM_1	PF00076.22	2.6e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006214	-	1413	-	ENSPMAP00000006185	471 (aa)	-	S4RLU9

Gene Model

Click here to download ENSPMAG00000005583's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005583's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000005583	sfpq	57	48.364	ENSPMAG00000004618	pspc1	84	48.364

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005583	sfpq	67	72.555	ENSG00000116560	SFPQ	68	72.848	Homo_sapiens
ENSPMAG00000005583	sfpq	67	72.555	ENSAMEG00000000815	SFPQ	73	72.381	Ailuropoda_melanoleuca
ENSPMAG00000005583	sfpq	95	60.619	ENSACIG00000000905	sfpq	56	72.671	Amphilophus_citrinellus
ENSPMAG00000005583	sfpq	88	63.789	ENSATEG00000002981	sfpq	54	72.615	Anabas_testudineus
ENSPMAG00000005583	sfpq	57	49.627	WBGene00017778	nono-1	66	49.593	Caenorhabditis_elegans
ENSPMAG00000005583	sfpq	51	61.983	ENSTSYG00000035106	-	56	62.621	Carlito_syrichta
ENSPMAG00000005583	sfpq	51	75.104	ENSTSYG00000037120	-	69	75.104	Carlito_syrichta
ENSPMAG00000005583	sfpq	51	66.805	ENSCPOG00000015018	-	52	75.978	Cavia_porcellus
ENSPMAG00000005583	sfpq	51	75.104	ENSCLAG00000009583	-	69	75.104	Chinchilla_lanigera
ENSPMAG00000005583	sfpq	57	73.704	ENSCHOG00000009131	SFPQ	71	73.704	Choloepus_hoffmanni
ENSPMAG00000005583	sfpq	51	75.104	ENSCANG00000028087	-	69	75.104	Colobus_angolensis_palliatus
ENSPMAG00000005583	sfpq	67	72.240	ENSCGRG00000010128	Sfpq	70	72.240	Cricetulus_griseus_crigri
ENSPMAG00000005583	sfpq	92	59.540	ENSCSEG00000007852	sfpq	52	71.924	Cynoglossus_semilaevis
ENSPMAG00000005583	sfpq	99	56.600	ENSCVAG00000019538	sfpq	50	70.440	Cyprinodon_variegatus
ENSPMAG00000005583	sfpq	99	58.542	ENSDARG00000011564	sfpq	100	78.261	Danio_rerio
ENSPMAG00000005583	sfpq	71	69.461	ENSELUG00000023145	sfpq	52	71.207	Esox_lucius
ENSPMAG00000005583	sfpq	51	76.891	ENSFALG00000000731	SFPQ	68	76.891	Ficedula_albicollis
ENSPMAG00000005583	sfpq	51	66.390	ENSFDAG00000017723	-	53	75.978	Fukomys_damarensis
ENSPMAG00000005583	sfpq	95	56.455	ENSGMOG00000011950	SFPQ	57	71.651	Gadus_morhua
ENSPMAG00000005583	sfpq	68	70.093	ENSGMOG00000011957	sfpq	50	70.093	Gadus_morhua
ENSPMAG00000005583	sfpq	99	55.278	ENSGAFG00000014571	sfpq	55	70.347	Gambusia_affinis
ENSPMAG00000005583	sfpq	93	58.658	ENSGACG00000002034	sfpq	50	75.309	Gasterosteus_aculeatus
ENSPMAG00000005583	sfpq	67	72.555	ENSGGOG00000026354	SFPQ	69	75.104	Gorilla_gorilla
ENSPMAG00000005583	sfpq	51	75.104	ENSHGLG00100004136	-	69	75.104	Heterocephalus_glaber_male
ENSPMAG00000005583	sfpq	83	64.031	ENSHCOG00000008612	sfpq	58	68.454	Hippocampus_comes
ENSPMAG00000005583	sfpq	80	65.707	ENSIPUG00000013076	SFPQ	58	72.981	Ictalurus_punctatus
ENSPMAG00000005583	sfpq	51	75.104	ENSSTOG00000014004	-	69	75.104	Ictidomys_tridecemlineatus
ENSPMAG00000005583	sfpq	60	75.177	ENSLACG00000014728	SFPQ	56	72.642	Latimeria_chalumnae
ENSPMAG00000005583	sfpq	73	67.638	ENSLOCG00000001067	sfpq	58	73.313	Lepisosteus_oculatus
ENSPMAG00000005583	sfpq	51	71.784	ENSMLEG00000010643	-	68	71.784	Mandrillus_leucophaeus
ENSPMAG00000005583	sfpq	87	62.061	ENSMAMG00000007875	sfpq	54	72.923	Mastacembelus_armatus
ENSPMAG00000005583	sfpq	99	56.972	ENSMZEG00005026091	sfpq	50	72.555	Maylandia_zebra
ENSPMAG00000005583	sfpq	57	75.281	ENSMGAG00000004237	SFPQ	60	76.068	Meleagris_gallopavo
ENSPMAG00000005583	sfpq	67	69.401	ENSMOCG00000019075	Sfpq	65	69.401	Microtus_ochrogaster
ENSPMAG00000005583	sfpq	93	60.480	ENSMMOG00000001074	sfpq	51	72.000	Mola_mola
ENSPMAG00000005583	sfpq	87	63.923	ENSMALG00000010381	sfpq	58	73.538	Monopterus_albus
ENSPMAG00000005583	sfpq	51	74.689	ENSMPUG00000014931	-	77	74.689	Mustela_putorius_furo
ENSPMAG00000005583	sfpq	67	72.871	ENSMLUG00000027090	SFPQ	71	72.871	Myotis_lucifugus
ENSPMAG00000005583	sfpq	96	59.129	ENSNBRG00000017479	sfpq	50	72.871	Neolamprologus_brichardi
ENSPMAG00000005583	sfpq	51	75.104	ENSNLEG00000035521	-	69	75.104	Nomascus_leucogenys
ENSPMAG00000005583	sfpq	51	75.934	ENSOANG00000008789	-	69	75.934	Ornithorhynchus_anatinus
ENSPMAG00000005583	sfpq	67	72.555	ENSOCUG00000001877	SFPQ	62	72.555	Oryctolagus_cuniculus
ENSPMAG00000005583	sfpq	67	72.555	ENSOGAG00000027710	SFPQ	53	73.310	Otolemur_garnettii
ENSPMAG00000005583	sfpq	51	75.104	ENSPPRG00000015478	-	68	75.104	Panthera_pardus
ENSPMAG00000005583	sfpq	51	75.104	ENSPTIG00000007710	-	69	75.104	Panthera_tigris_altaica
ENSPMAG00000005583	sfpq	93	61.348	ENSPKIG00000023035	sfpq	55	73.684	Paramormyrops_kingsleyae
ENSPMAG00000005583	sfpq	67	73.885	ENSPSIG00000011494	SFPQ	73	73.885	Pelodiscus_sinensis
ENSPMAG00000005583	sfpq	88	61.353	ENSPMGG00000023883	sfpq	52	75.177	Periophthalmus_magnuspinnatus
ENSPMAG00000005583	sfpq	67	72.240	ENSPEMG00000009794	Sfpq	65	72.240	Peromyscus_maniculatus_bairdii
ENSPMAG00000005583	sfpq	99	57.862	ENSPFOG00000003127	sfpq	70	56.200	Poecilia_formosa
ENSPMAG00000005583	sfpq	89	61.949	ENSPNAG00000002128	sfpq	55	74.303	Pygocentrus_nattereri
ENSPMAG00000005583	sfpq	66	67.524	ENSRBIG00000035286	SFPQ	69	75.104	Rhinopithecus_bieti
ENSPMAG00000005583	sfpq	67	72.555	ENSRROG00000040992	SFPQ	69	75.104	Rhinopithecus_roxellana
ENSPMAG00000005583	sfpq	51	75.104	ENSSBOG00000024972	-	69	75.104	Saimiri_boliviensis_boliviensis
ENSPMAG00000005583	sfpq	67	72.871	ENSSHAG00000016107	-	68	72.871	Sarcophilus_harrisii
ENSPMAG00000005583	sfpq	51	75.519	ENSSHAG00000012312	-	69	73.750	Sarcophilus_harrisii
ENSPMAG00000005583	sfpq	80	65.544	ENSSFOG00015009289	sfpq	60	72.393	Scleropages_formosus
ENSPMAG00000005583	sfpq	77	67.302	ENSSMAG00000018201	sfpq	51	73.817	Scophthalmus_maximus
ENSPMAG00000005583	sfpq	92	61.751	ENSSDUG00000008402	sfpq	50	74.214	Seriola_dumerili
ENSPMAG00000005583	sfpq	55	74.031	ENSSARG00000006409	SFPQ	70	74.031	Sorex_araneus
ENSPMAG00000005583	sfpq	96	58.120	ENSSPAG00000016550	sfpq	50	74.448	Stegastes_partitus
ENSPMAG00000005583	sfpq	67	73.885	ENSTGUG00000001722	SFPQ	73	73.885	Taeniopygia_guttata
ENSPMAG00000005583	sfpq	100	57.055	ENSTRUG00000003783	sfpq	52	71.472	Takifugu_rubripes
ENSPMAG00000005583	sfpq	94	60.132	ENSTNIG00000011331	sfpq	54	72.642	Tetraodon_nigroviridis
ENSPMAG00000005583	sfpq	51	71.369	ENSUMAG00000008056	-	68	71.369	Ursus_maritimus
ENSPMAG00000005583	sfpq	51	67.635	ENSVVUG00000000874	-	70	67.635	Vulpes_vulpes
ENSPMAG00000005583	sfpq	72	70.294	ENSXETG00000009682	sfpq	88	73.354	Xenopus_tropicalis