EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005588 (Gene tree)
Gene ID: -
Gene Symbol: prpf3
Alias: -
Full Name: PRP3 pre-mRNA processing factor 3 homolog (yeast)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 14785 bases
Position: chrGL482052:5043-19827
Accession: ZDB-GENE-040823-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006160	PRP3	PF08572.10	1.1e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006189	-	1356	-	ENSPMAP00000006160	451 (aa)	-	S4RLS4

Gene Model

Click here to download ENSPMAG00000005588's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005588's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005588	prpf3	99	69.757	ENSG00000117360	PRPF3	63	72.146	Homo_sapiens
ENSPMAG00000005588	prpf3	97	74.142	ENSAPOG00000015584	prpf3	62	74.142	Acanthochromis_polyacanthus
ENSPMAG00000005588	prpf3	99	69.978	ENSAMEG00000001630	PRPF3	63	72.374	Ailuropoda_melanoleuca
ENSPMAG00000005588	prpf3	99	72.185	ENSACIG00000007876	prpf3	60	73.516	Amphilophus_citrinellus
ENSPMAG00000005588	prpf3	97	74.142	ENSAOCG00000011449	prpf3	62	74.142	Amphiprion_ocellaris
ENSPMAG00000005588	prpf3	97	72.311	ENSATEG00000023583	prpf3	62	72.311	Anabas_testudineus
ENSPMAG00000005588	prpf3	99	70.419	ENSAPLG00000002440	PRPF3	63	72.146	Anas_platyrhynchos
ENSPMAG00000005588	prpf3	97	71.754	ENSACAG00000003176	PRPF3	63	72.210	Anolis_carolinensis
ENSPMAG00000005588	prpf3	99	69.757	ENSANAG00000026138	PRPF3	63	72.146	Aotus_nancymaae
ENSPMAG00000005588	prpf3	99	72.124	ENSACLG00000020127	prpf3	62	73.455	Astatotilapia_calliptera
ENSPMAG00000005588	prpf3	99	69.469	ENSAMXG00000007306	prpf3	61	70.709	Astyanax_mexicanus
ENSPMAG00000005588	prpf3	99	69.757	ENSBTAG00000013946	PRPF3	63	72.146	Bos_taurus
ENSPMAG00000005588	prpf3	87	48.111	WBGene00010844	prp-3	62	48.111	Caenorhabditis_elegans
ENSPMAG00000005588	prpf3	99	69.757	ENSCJAG00000009926	PRPF3	63	72.146	Callithrix_jacchus
ENSPMAG00000005588	prpf3	99	69.757	ENSCAFG00000011820	PRPF3	63	72.146	Canis_familiaris
ENSPMAG00000005588	prpf3	70	70.347	ENSCAFG00020019653	PRPF3	54	72.185	Canis_lupus_dingo
ENSPMAG00000005588	prpf3	99	69.757	ENSCHIG00000015434	PRPF3	63	72.146	Capra_hircus
ENSPMAG00000005588	prpf3	99	70.199	ENSTSYG00000001383	PRPF3	63	72.603	Carlito_syrichta
ENSPMAG00000005588	prpf3	99	65.121	ENSCAPG00000017812	PRPF3	68	67.580	Cavia_aperea
ENSPMAG00000005588	prpf3	99	69.757	ENSCPOG00000008068	PRPF3	63	72.146	Cavia_porcellus
ENSPMAG00000005588	prpf3	99	69.757	ENSCCAG00000026380	PRPF3	63	72.146	Cebus_capucinus
ENSPMAG00000005588	prpf3	99	54.066	ENSCATG00000041778	PRPF3	61	55.982	Cercocebus_atys
ENSPMAG00000005588	prpf3	99	69.757	ENSCLAG00000015009	PRPF3	63	72.146	Chinchilla_lanigera
ENSPMAG00000005588	prpf3	99	70.640	ENSCPBG00000008216	PRPF3	63	72.146	Chrysemys_picta_bellii
ENSPMAG00000005588	prpf3	93	60.520	ENSCING00000003312	-	99	60.520	Ciona_intestinalis
ENSPMAG00000005588	prpf3	96	58.716	ENSCSAVG00000008720	-	74	58.716	Ciona_savignyi
ENSPMAG00000005588	prpf3	99	69.316	ENSCANG00000036769	PRPF3	63	71.689	Colobus_angolensis_palliatus
ENSPMAG00000005588	prpf3	99	69.757	ENSCGRG00001019100	Prpf3	63	72.146	Cricetulus_griseus_chok1gshd
ENSPMAG00000005588	prpf3	99	69.757	ENSCGRG00000007322	Prpf3	63	72.146	Cricetulus_griseus_crigri
ENSPMAG00000005588	prpf3	97	71.396	ENSCSEG00000002532	prpf3	67	70.481	Cynoglossus_semilaevis
ENSPMAG00000005588	prpf3	99	72.124	ENSCVAG00000009318	prpf3	62	73.455	Cyprinodon_variegatus
ENSPMAG00000005588	prpf3	99	69.690	ENSDARG00000086425	prpf3	62	70.938	Danio_rerio
ENSPMAG00000005588	prpf3	99	70.419	ENSDNOG00000005904	PRPF3	68	72.831	Dasypus_novemcinctus
ENSPMAG00000005588	prpf3	99	69.757	ENSDORG00000008664	Prpf3	68	72.146	Dipodomys_ordii
ENSPMAG00000005588	prpf3	97	59.009	FBgn0036915	Prp3	82	59.009	Drosophila_melanogaster
ENSPMAG00000005588	prpf3	99	70.667	ENSETEG00000019124	PRPF3	63	72.874	Echinops_telfairi
ENSPMAG00000005588	prpf3	97	75.737	ENSEBUG00000011680	prpf3	60	75.854	Eptatretus_burgeri
ENSPMAG00000005588	prpf3	99	69.757	ENSEASG00005001566	PRPF3	63	72.146	Equus_asinus_asinus
ENSPMAG00000005588	prpf3	99	69.757	ENSECAG00000019840	PRPF3	63	72.146	Equus_caballus
ENSPMAG00000005588	prpf3	97	66.743	ENSEEUG00000007338	PRPF3	63	68.037	Erinaceus_europaeus
ENSPMAG00000005588	prpf3	99	61.454	ENSELUG00000013624	prpf3	59	62.100	Esox_lucius
ENSPMAG00000005588	prpf3	99	69.757	ENSFCAG00000013940	PRPF3	63	72.146	Felis_catus
ENSPMAG00000005588	prpf3	99	69.757	ENSFDAG00000010365	PRPF3	63	72.146	Fukomys_damarensis
ENSPMAG00000005588	prpf3	97	73.455	ENSFHEG00000021746	prpf3	63	73.455	Fundulus_heteroclitus
ENSPMAG00000005588	prpf3	97	71.854	ENSGMOG00000008535	prpf3	61	71.854	Gadus_morhua
ENSPMAG00000005588	prpf3	99	70.419	ENSGALG00000028205	PRPF3	63	72.146	Gallus_gallus
ENSPMAG00000005588	prpf3	97	72.082	ENSGAFG00000012671	prpf3	62	72.082	Gambusia_affinis
ENSPMAG00000005588	prpf3	97	72.540	ENSGACG00000011792	prpf3	61	72.540	Gasterosteus_aculeatus
ENSPMAG00000005588	prpf3	99	69.978	ENSGAGG00000013765	PRPF3	79	71.689	Gopherus_agassizii
ENSPMAG00000005588	prpf3	76	71.221	ENSGGOG00000013174	PRPF3	58	72.674	Gorilla_gorilla
ENSPMAG00000005588	prpf3	99	72.788	ENSHBUG00000003493	prpf3	63	74.142	Haplochromis_burtoni
ENSPMAG00000005588	prpf3	99	69.757	ENSHGLG00000016569	PRPF3	63	72.146	Heterocephalus_glaber_female
ENSPMAG00000005588	prpf3	97	52.055	ENSHGLG00000016033	-	64	52.968	Heterocephalus_glaber_female
ENSPMAG00000005588	prpf3	97	51.826	ENSHGLG00100008951	-	64	52.740	Heterocephalus_glaber_male
ENSPMAG00000005588	prpf3	99	69.757	ENSHGLG00100007590	PRPF3	63	72.146	Heterocephalus_glaber_male
ENSPMAG00000005588	prpf3	96	70.439	ENSHCOG00000014058	prpf3	61	70.439	Hippocampus_comes
ENSPMAG00000005588	prpf3	99	71.239	ENSIPUG00000000902	PRPF3	64	71.396	Ictalurus_punctatus
ENSPMAG00000005588	prpf3	99	69.757	ENSSTOG00000001889	PRPF3	63	72.146	Ictidomys_tridecemlineatus
ENSPMAG00000005588	prpf3	97	72.540	ENSKMAG00000001390	prpf3	68	72.311	Kryptolebias_marmoratus
ENSPMAG00000005588	prpf3	97	73.227	ENSLBEG00000026310	prpf3	68	73.227	Labrus_bergylta
ENSPMAG00000005588	prpf3	89	64.691	ENSLACG00000010541	PRPF3	60	66.154	Latimeria_chalumnae
ENSPMAG00000005588	prpf3	99	69.757	ENSLAFG00000004713	PRPF3	63	72.146	Loxodonta_africana
ENSPMAG00000005588	prpf3	99	69.757	ENSMFAG00000039791	PRPF3	63	72.146	Macaca_fascicularis
ENSPMAG00000005588	prpf3	85	70.026	ENSMMUG00000016301	PRPF3	58	71.505	Macaca_mulatta
ENSPMAG00000005588	prpf3	99	69.757	ENSMNEG00000038161	PRPF3	63	72.146	Macaca_nemestrina
ENSPMAG00000005588	prpf3	76	71.221	ENSMLEG00000040609	PRPF3	58	72.674	Mandrillus_leucophaeus
ENSPMAG00000005588	prpf3	98	47.345	ENSMLEG00000041065	-	60	47.826	Mandrillus_leucophaeus
ENSPMAG00000005588	prpf3	97	71.233	ENSMAMG00000014968	prpf3	68	71.233	Mastacembelus_armatus
ENSPMAG00000005588	prpf3	99	72.788	ENSMZEG00005015970	prpf3	69	73.455	Maylandia_zebra
ENSPMAG00000005588	prpf3	99	70.419	ENSMGAG00000000707	PRPF3	63	72.146	Meleagris_gallopavo
ENSPMAG00000005588	prpf3	99	69.757	ENSMAUG00000017112	Prpf3	63	72.146	Mesocricetus_auratus
ENSPMAG00000005588	prpf3	99	69.978	ENSMICG00000015386	PRPF3	79	72.374	Microcebus_murinus
ENSPMAG00000005588	prpf3	99	69.757	ENSMOCG00000000242	Prpf3	63	72.146	Microtus_ochrogaster
ENSPMAG00000005588	prpf3	97	66.362	ENSMMOG00000016131	prpf3	61	66.362	Mola_mola
ENSPMAG00000005588	prpf3	99	69.978	ENSMODG00000018774	PRPF3	63	72.374	Monodelphis_domestica
ENSPMAG00000005588	prpf3	99	70.199	ENSMALG00000007257	prpf3	61	71.461	Monopterus_albus
ENSPMAG00000005588	prpf3	99	69.978	MGP_CAROLIEiJ_G0025354	Prpf3	63	72.374	Mus_caroli
ENSPMAG00000005588	prpf3	99	69.978	ENSMUSG00000015748	Prpf3	63	72.374	Mus_musculus
ENSPMAG00000005588	prpf3	99	69.978	MGP_PahariEiJ_G0026798	Prpf3	63	72.374	Mus_pahari
ENSPMAG00000005588	prpf3	99	69.978	MGP_SPRETEiJ_G0026298	Prpf3	63	72.374	Mus_spretus
ENSPMAG00000005588	prpf3	99	68.514	ENSMPUG00000005080	PRPF3	63	69.725	Mustela_putorius_furo
ENSPMAG00000005588	prpf3	99	69.757	ENSMLUG00000004646	-	63	72.146	Myotis_lucifugus
ENSPMAG00000005588	prpf3	99	69.757	ENSNGAG00000000910	Prpf3	63	72.146	Nannospalax_galili
ENSPMAG00000005588	prpf3	99	72.566	ENSNBRG00000003462	prpf3	60	73.913	Neolamprologus_brichardi
ENSPMAG00000005588	prpf3	84	70.312	ENSNLEG00000009841	PRPF3	59	71.816	Nomascus_leucogenys
ENSPMAG00000005588	prpf3	76	58.721	ENSMEUG00000008733	PRPF3	53	60.174	Notamacropus_eugenii
ENSPMAG00000005588	prpf3	99	70.000	ENSOPRG00000010139	PRPF3	63	72.414	Ochotona_princeps
ENSPMAG00000005588	prpf3	99	70.222	ENSODEG00000011363	-	63	72.644	Octodon_degus
ENSPMAG00000005588	prpf3	96	55.305	ENSODEG00000014412	-	65	55.882	Octodon_degus
ENSPMAG00000005588	prpf3	99	72.566	ENSONIG00000006394	prpf3	61	73.913	Oreochromis_niloticus
ENSPMAG00000005588	prpf3	99	60.435	ENSOANG00000015441	PRPF3	63	61.678	Ornithorhynchus_anatinus
ENSPMAG00000005588	prpf3	99	69.757	ENSOCUG00000011760	PRPF3	63	72.146	Oryctolagus_cuniculus
ENSPMAG00000005588	prpf3	97	70.709	ENSORLG00000010330	prpf3	62	70.709	Oryzias_latipes
ENSPMAG00000005588	prpf3	97	70.709	ENSORLG00020009054	prpf3	62	70.709	Oryzias_latipes_hni
ENSPMAG00000005588	prpf3	97	70.481	ENSORLG00015015016	prpf3	62	70.481	Oryzias_latipes_hsok
ENSPMAG00000005588	prpf3	97	70.023	ENSOMEG00000000940	prpf3	68	70.023	Oryzias_melastigma
ENSPMAG00000005588	prpf3	99	65.121	ENSOGAG00000005352	PRPF3	63	67.352	Otolemur_garnettii
ENSPMAG00000005588	prpf3	99	69.757	ENSOARG00000020798	PRPF3	63	72.146	Ovis_aries
ENSPMAG00000005588	prpf3	99	69.757	ENSPPAG00000030983	PRPF3	63	72.146	Pan_paniscus
ENSPMAG00000005588	prpf3	95	57.639	ENSPPAG00000043769	-	64	57.639	Pan_paniscus
ENSPMAG00000005588	prpf3	99	69.757	ENSPPRG00000000731	PRPF3	63	72.146	Panthera_pardus
ENSPMAG00000005588	prpf3	99	69.757	ENSPTIG00000005516	PRPF3	63	72.146	Panthera_tigris_altaica
ENSPMAG00000005588	prpf3	99	69.757	ENSPTRG00000001254	PRPF3	63	72.146	Pan_troglodytes
ENSPMAG00000005588	prpf3	95	56.481	ENSPTRG00000047819	-	64	56.481	Pan_troglodytes
ENSPMAG00000005588	prpf3	99	69.757	ENSPANG00000000499	PRPF3	63	72.146	Papio_anubis
ENSPMAG00000005588	prpf3	99	71.302	ENSPKIG00000010501	prpf3	69	72.603	Paramormyrops_kingsleyae
ENSPMAG00000005588	prpf3	99	70.354	ENSPSIG00000014877	PRPF3	63	71.625	Pelodiscus_sinensis
ENSPMAG00000005588	prpf3	97	69.794	ENSPMGG00000007776	prpf3	67	69.794	Periophthalmus_magnuspinnatus
ENSPMAG00000005588	prpf3	99	69.757	ENSPEMG00000011672	Prpf3	63	72.146	Peromyscus_maniculatus_bairdii
ENSPMAG00000005588	prpf3	99	69.978	ENSPCIG00000008795	PRPF3	63	72.374	Phascolarctos_cinereus
ENSPMAG00000005588	prpf3	97	72.603	ENSPFOG00000013638	prpf3	61	72.603	Poecilia_formosa
ENSPMAG00000005588	prpf3	97	72.769	ENSPLAG00000018103	prpf3	62	72.769	Poecilia_latipinna
ENSPMAG00000005588	prpf3	97	72.540	ENSPMEG00000023546	prpf3	62	72.540	Poecilia_mexicana
ENSPMAG00000005588	prpf3	97	71.396	ENSPREG00000017216	prpf3	62	71.396	Poecilia_reticulata
ENSPMAG00000005588	prpf3	60	63.004	ENSPPYG00000018646	-	52	63.004	Pongo_abelii
ENSPMAG00000005588	prpf3	89	68.395	ENSPPYG00000000900	PRPF3	60	71.026	Pongo_abelii
ENSPMAG00000005588	prpf3	99	69.757	ENSPCAG00000014908	PRPF3	63	72.146	Procavia_capensis
ENSPMAG00000005588	prpf3	99	69.978	ENSPCOG00000013828	PRPF3	63	72.374	Propithecus_coquereli
ENSPMAG00000005588	prpf3	99	69.095	ENSPVAG00000013472	PRPF3	63	71.461	Pteropus_vampyrus
ENSPMAG00000005588	prpf3	99	72.788	ENSPNYG00000004279	prpf3	63	74.142	Pundamilia_nyererei
ENSPMAG00000005588	prpf3	99	69.316	ENSPNAG00000001799	prpf3	69	70.252	Pygocentrus_nattereri
ENSPMAG00000005588	prpf3	99	69.757	ENSRNOG00000025629	Prpf3	63	72.146	Rattus_norvegicus
ENSPMAG00000005588	prpf3	73	65.957	ENSRBIG00000028854	PRPF3	55	69.504	Rhinopithecus_bieti
ENSPMAG00000005588	prpf3	99	69.757	ENSRROG00000027464	PRPF3	63	72.146	Rhinopithecus_roxellana
ENSPMAG00000005588	prpf3	76	30.303	YDR473C	PRP3	81	30.556	Saccharomyces_cerevisiae
ENSPMAG00000005588	prpf3	99	60.927	ENSSBOG00000033104	PRPF3	60	63.014	Saimiri_boliviensis_boliviensis
ENSPMAG00000005588	prpf3	99	69.536	ENSSHAG00000009548	PRPF3	63	71.918	Sarcophilus_harrisii
ENSPMAG00000005588	prpf3	99	71.586	ENSSFOG00015022014	prpf3	69	72.893	Scleropages_formosus
ENSPMAG00000005588	prpf3	97	71.854	ENSSMAG00000015739	prpf3	61	72.769	Scophthalmus_maximus
ENSPMAG00000005588	prpf3	97	68.650	ENSSDUG00000006840	prpf3	61	68.650	Seriola_dumerili
ENSPMAG00000005588	prpf3	99	71.903	ENSSLDG00000015423	prpf3	60	73.227	Seriola_lalandi_dorsalis
ENSPMAG00000005588	prpf3	99	69.956	ENSSARG00000011064	PRPF3	63	72.336	Sorex_araneus
ENSPMAG00000005588	prpf3	96	71.724	ENSSPUG00000000809	PRPF3	62	71.724	Sphenodon_punctatus
ENSPMAG00000005588	prpf3	97	74.371	ENSSPAG00000018721	prpf3	68	73.227	Stegastes_partitus
ENSPMAG00000005588	prpf3	99	69.757	ENSSSCG00000030119	PRPF3	79	72.146	Sus_scrofa
ENSPMAG00000005588	prpf3	99	61.589	ENSTGUG00000004552	PRPF3	63	63.014	Taeniopygia_guttata
ENSPMAG00000005588	prpf3	97	70.481	ENSTRUG00000014923	prpf3	63	70.481	Takifugu_rubripes
ENSPMAG00000005588	prpf3	99	68.478	ENSTNIG00000008058	prpf3	63	69.663	Tetraodon_nigroviridis
ENSPMAG00000005588	prpf3	97	65.376	ENSTBEG00000014072	PRPF3	68	68.265	Tupaia_belangeri
ENSPMAG00000005588	prpf3	99	62.472	ENSTTRG00000010616	PRPF3	63	64.612	Tursiops_truncatus
ENSPMAG00000005588	prpf3	99	69.757	ENSUAMG00000009345	PRPF3	79	72.146	Ursus_americanus
ENSPMAG00000005588	prpf3	99	69.757	ENSUMAG00000003720	PRPF3	63	72.146	Ursus_maritimus
ENSPMAG00000005588	prpf3	97	70.843	ENSVPAG00000005425	PRPF3	63	72.146	Vicugna_pacos
ENSPMAG00000005588	prpf3	99	69.757	ENSVVUG00000007933	PRPF3	68	72.146	Vulpes_vulpes
ENSPMAG00000005588	prpf3	99	70.110	ENSXETG00000018654	prpf3	63	71.364	Xenopus_tropicalis
ENSPMAG00000005588	prpf3	97	72.540	ENSXMAG00000016347	prpf3	68	72.082	Xiphophorus_maculatus