EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005657 (Gene tree)
Gene ID: -
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 30828 bases
Position: chrGL477147:33304-64131
Accession: ZDB-GENE-040426-2096
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006253	RtcB	PF01139.17	4.8e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006282	-	1600	-	ENSPMAP00000006253	505 (aa)	-	S4RM17

Gene Model

Click here to download ENSPMAG00000005657's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005657's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005657	rtcb	100	91.683	ENSG00000100220	RTCB	100	91.683	Homo_sapiens
ENSPMAG00000005657	rtcb	100	91.683	ENSAPOG00000006040	rtcb	100	91.683	Acanthochromis_polyacanthus
ENSPMAG00000005657	rtcb	100	91.683	ENSAMEG00000016152	RTCB	100	91.683	Ailuropoda_melanoleuca
ENSPMAG00000005657	rtcb	100	86.931	ENSACIG00000009083	rtcb	100	86.931	Amphilophus_citrinellus
ENSPMAG00000005657	rtcb	100	91.881	ENSAOCG00000005662	rtcb	100	93.043	Amphiprion_ocellaris
ENSPMAG00000005657	rtcb	100	91.881	ENSAPEG00000024701	rtcb	100	91.881	Amphiprion_percula
ENSPMAG00000005657	rtcb	96	87.474	ENSAPEG00000024653	rtcb	100	87.474	Amphiprion_percula
ENSPMAG00000005657	rtcb	100	91.485	ENSATEG00000000618	rtcb	100	91.485	Anabas_testudineus
ENSPMAG00000005657	rtcb	100	88.439	ENSACAG00000014817	RTCB	100	88.439	Anolis_carolinensis
ENSPMAG00000005657	rtcb	100	77.030	ENSANAG00000018191	-	91	77.030	Aotus_nancymaae
ENSPMAG00000005657	rtcb	72	91.667	ENSANAG00000023724	-	84	91.667	Aotus_nancymaae
ENSPMAG00000005657	rtcb	100	91.089	ENSACLG00000008367	rtcb	100	92.391	Astatotilapia_calliptera
ENSPMAG00000005657	rtcb	100	91.089	ENSAMXG00000042320	rtcb	100	91.089	Astyanax_mexicanus
ENSPMAG00000005657	rtcb	100	91.683	ENSBTAG00000011070	RTCB	100	91.683	Bos_taurus
ENSPMAG00000005657	rtcb	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSPMAG00000005657	rtcb	100	91.485	ENSCJAG00000006128	RTCB	100	91.485	Callithrix_jacchus
ENSPMAG00000005657	rtcb	100	91.683	ENSCAFG00000001785	RTCB	100	91.683	Canis_familiaris
ENSPMAG00000005657	rtcb	100	87.327	ENSCAFG00000010789	-	100	87.327	Canis_familiaris
ENSPMAG00000005657	rtcb	87	87.955	ENSCAFG00020018953	-	99	87.955	Canis_lupus_dingo
ENSPMAG00000005657	rtcb	100	91.683	ENSCAFG00020004890	-	100	91.683	Canis_lupus_dingo
ENSPMAG00000005657	rtcb	100	91.683	ENSCHIG00000027009	-	100	91.683	Capra_hircus
ENSPMAG00000005657	rtcb	100	91.485	ENSTSYG00000012320	RTCB	100	91.485	Carlito_syrichta
ENSPMAG00000005657	rtcb	94	91.405	ENSCAPG00000011647	RTCB	96	91.405	Cavia_aperea
ENSPMAG00000005657	rtcb	100	91.485	ENSCCAG00000000618	RTCB	100	91.485	Cebus_capucinus
ENSPMAG00000005657	rtcb	100	91.485	ENSCATG00000033424	RTCB	100	91.485	Cercocebus_atys
ENSPMAG00000005657	rtcb	100	91.485	ENSCLAG00000007997	RTCB	100	91.485	Chinchilla_lanigera
ENSPMAG00000005657	rtcb	100	91.287	ENSCSAG00000008351	RTCB	100	91.287	Chlorocebus_sabaeus
ENSPMAG00000005657	rtcb	100	77.822	ENSCHOG00000009123	RTCB	100	77.822	Choloepus_hoffmanni
ENSPMAG00000005657	rtcb	100	91.287	ENSCPBG00000023184	RTCB	100	91.287	Chrysemys_picta_bellii
ENSPMAG00000005657	rtcb	100	80.990	ENSCING00000003830	-	100	80.990	Ciona_intestinalis
ENSPMAG00000005657	rtcb	100	82.574	ENSCSAVG00000008124	-	99	82.574	Ciona_savignyi
ENSPMAG00000005657	rtcb	100	88.119	ENSCANG00000001891	RTCB	100	88.119	Colobus_angolensis_palliatus
ENSPMAG00000005657	rtcb	100	91.287	ENSCGRG00001011173	Rtcb	100	91.287	Cricetulus_griseus_chok1gshd
ENSPMAG00000005657	rtcb	93	92.128	ENSCGRG00000009587	-	96	92.128	Cricetulus_griseus_crigri
ENSPMAG00000005657	rtcb	100	91.881	ENSCSEG00000003986	rtcb	100	91.881	Cynoglossus_semilaevis
ENSPMAG00000005657	rtcb	82	90.385	ENSCVAG00000000569	rtcb	95	90.385	Cyprinodon_variegatus
ENSPMAG00000005657	rtcb	100	90.693	ENSDARG00000101047	rtcb	100	90.693	Danio_rerio
ENSPMAG00000005657	rtcb	80	89.189	ENSDNOG00000012425	RTCB	99	89.189	Dasypus_novemcinctus
ENSPMAG00000005657	rtcb	100	91.881	ENSDORG00000010855	Rtcb	100	91.881	Dipodomys_ordii
ENSPMAG00000005657	rtcb	99	83.897	FBgn0032781	RtcB	99	83.897	Drosophila_melanogaster
ENSPMAG00000005657	rtcb	100	85.545	ENSETEG00000001988	RTCB	100	85.545	Echinops_telfairi
ENSPMAG00000005657	rtcb	100	87.129	ENSEBUG00000014235	rtcb	100	87.129	Eptatretus_burgeri
ENSPMAG00000005657	rtcb	100	91.485	ENSEASG00005019059	RTCB	100	91.485	Equus_asinus_asinus
ENSPMAG00000005657	rtcb	100	91.485	ENSECAG00000023998	RTCB	100	91.485	Equus_caballus
ENSPMAG00000005657	rtcb	89	83.221	ENSEEUG00000006251	RTCB	100	83.221	Erinaceus_europaeus
ENSPMAG00000005657	rtcb	100	79.395	ENSELUG00000009275	rtcb	100	79.395	Esox_lucius
ENSPMAG00000005657	rtcb	100	91.683	ENSFCAG00000026480	RTCB	100	91.683	Felis_catus
ENSPMAG00000005657	rtcb	100	91.485	ENSFALG00000013334	RTCB	100	91.485	Ficedula_albicollis
ENSPMAG00000005657	rtcb	100	91.485	ENSFDAG00000018150	RTCB	100	91.485	Fukomys_damarensis
ENSPMAG00000005657	rtcb	100	91.683	ENSFHEG00000009595	rtcb	100	91.683	Fundulus_heteroclitus
ENSPMAG00000005657	rtcb	100	89.505	ENSGMOG00000018882	rtcb	100	89.505	Gadus_morhua
ENSPMAG00000005657	rtcb	100	91.485	ENSGALG00000012611	RTCB	100	91.485	Gallus_gallus
ENSPMAG00000005657	rtcb	100	91.485	ENSGAFG00000004198	rtcb	100	91.485	Gambusia_affinis
ENSPMAG00000005657	rtcb	100	91.089	ENSGACG00000000586	rtcb	100	91.089	Gasterosteus_aculeatus
ENSPMAG00000005657	rtcb	93	90.000	ENSGAGG00000019133	RTCB	98	90.000	Gopherus_agassizii
ENSPMAG00000005657	rtcb	100	91.683	ENSGGOG00000011402	RTCB	100	91.683	Gorilla_gorilla
ENSPMAG00000005657	rtcb	100	91.089	ENSHBUG00000020571	rtcb	100	91.089	Haplochromis_burtoni
ENSPMAG00000005657	rtcb	100	91.485	ENSHGLG00000004492	RTCB	100	91.485	Heterocephalus_glaber_female
ENSPMAG00000005657	rtcb	93	66.098	ENSHGLG00000001066	-	99	66.098	Heterocephalus_glaber_female
ENSPMAG00000005657	rtcb	100	91.485	ENSHGLG00100008965	RTCB	100	91.485	Heterocephalus_glaber_male
ENSPMAG00000005657	rtcb	100	89.744	ENSHCOG00000006450	rtcb	100	89.744	Hippocampus_comes
ENSPMAG00000005657	rtcb	100	90.693	ENSIPUG00000015443	rtcb	100	90.693	Ictalurus_punctatus
ENSPMAG00000005657	rtcb	100	91.485	ENSSTOG00000003878	RTCB	100	91.485	Ictidomys_tridecemlineatus
ENSPMAG00000005657	rtcb	100	91.089	ENSJJAG00000010667	Rtcb	100	91.089	Jaculus_jaculus
ENSPMAG00000005657	rtcb	100	91.287	ENSKMAG00000013178	rtcb	100	91.287	Kryptolebias_marmoratus
ENSPMAG00000005657	rtcb	100	90.693	ENSLBEG00000000214	rtcb	100	90.693	Labrus_bergylta
ENSPMAG00000005657	rtcb	100	91.683	ENSLBEG00000010566	RTCB	100	91.683	Labrus_bergylta
ENSPMAG00000005657	rtcb	100	90.693	ENSLACG00000013033	RTCB	100	90.693	Latimeria_chalumnae
ENSPMAG00000005657	rtcb	100	90.495	ENSLOCG00000016515	rtcb	99	90.495	Lepisosteus_oculatus
ENSPMAG00000005657	rtcb	100	90.891	ENSLAFG00000002082	RTCB	100	90.891	Loxodonta_africana
ENSPMAG00000005657	rtcb	100	91.287	ENSMFAG00000034419	RTCB	100	91.287	Macaca_fascicularis
ENSPMAG00000005657	rtcb	100	91.287	ENSMMUG00000006720	RTCB	100	91.287	Macaca_mulatta
ENSPMAG00000005657	rtcb	100	91.287	ENSMNEG00000040669	RTCB	100	91.287	Macaca_nemestrina
ENSPMAG00000005657	rtcb	100	91.485	ENSMLEG00000040505	RTCB	100	91.485	Mandrillus_leucophaeus
ENSPMAG00000005657	rtcb	100	90.891	ENSMAMG00000020676	rtcb	100	90.891	Mastacembelus_armatus
ENSPMAG00000005657	rtcb	100	91.089	ENSMZEG00005018942	rtcb	100	91.089	Maylandia_zebra
ENSPMAG00000005657	rtcb	100	91.124	ENSMGAG00000012805	RTCB	100	91.124	Meleagris_gallopavo
ENSPMAG00000005657	rtcb	60	92.553	ENSMAUG00000008301	Rtcb	100	92.553	Mesocricetus_auratus
ENSPMAG00000005657	rtcb	100	72.871	ENSMICG00000036677	-	100	72.871	Microcebus_murinus
ENSPMAG00000005657	rtcb	100	91.485	ENSMICG00000013303	-	100	91.485	Microcebus_murinus
ENSPMAG00000005657	rtcb	100	91.485	ENSMOCG00000002440	Rtcb	100	91.485	Microtus_ochrogaster
ENSPMAG00000005657	rtcb	100	90.891	ENSMMOG00000005987	rtcb	100	90.891	Mola_mola
ENSPMAG00000005657	rtcb	100	90.891	ENSMODG00000001414	RTCB	100	90.891	Monodelphis_domestica
ENSPMAG00000005657	rtcb	100	90.891	ENSMALG00000007603	rtcb	100	90.891	Monopterus_albus
ENSPMAG00000005657	rtcb	100	91.287	MGP_CAROLIEiJ_G0015689	Rtcb	100	91.287	Mus_caroli
ENSPMAG00000005657	rtcb	100	91.287	ENSMUSG00000001783	Rtcb	100	91.287	Mus_musculus
ENSPMAG00000005657	rtcb	100	91.287	MGP_PahariEiJ_G0031396	Rtcb	100	91.287	Mus_pahari
ENSPMAG00000005657	rtcb	100	91.287	MGP_SPRETEiJ_G0016507	Rtcb	100	91.287	Mus_spretus
ENSPMAG00000005657	rtcb	100	91.683	ENSMPUG00000012285	RTCB	100	91.683	Mustela_putorius_furo
ENSPMAG00000005657	rtcb	100	88.955	ENSMLUG00000007803	RTCB	100	88.955	Myotis_lucifugus
ENSPMAG00000005657	rtcb	72	93.333	ENSNGAG00000005093	Rtcb	100	93.333	Nannospalax_galili
ENSPMAG00000005657	rtcb	100	91.089	ENSNBRG00000017202	rtcb	100	91.089	Neolamprologus_brichardi
ENSPMAG00000005657	rtcb	100	91.683	ENSNLEG00000004960	RTCB	100	91.683	Nomascus_leucogenys
ENSPMAG00000005657	rtcb	88	91.964	ENSMEUG00000007809	-	88	91.964	Notamacropus_eugenii
ENSPMAG00000005657	rtcb	73	92.500	ENSOPRG00000003488	RTCB	79	92.500	Ochotona_princeps
ENSPMAG00000005657	rtcb	77	91.882	ENSODEG00000013033	-	100	91.882	Octodon_degus
ENSPMAG00000005657	rtcb	100	60.792	ENSODEG00000005042	-	100	60.792	Octodon_degus
ENSPMAG00000005657	rtcb	100	91.485	ENSONIG00000007474	rtcb	100	91.485	Oreochromis_niloticus
ENSPMAG00000005657	rtcb	100	91.287	ENSOANG00000005524	RTCB	100	91.287	Ornithorhynchus_anatinus
ENSPMAG00000005657	rtcb	93	91.489	ENSOCUG00000008270	RTCB	96	91.489	Oryctolagus_cuniculus
ENSPMAG00000005657	rtcb	100	90.693	ENSORLG00000020093	rtcb	100	90.693	Oryzias_latipes
ENSPMAG00000005657	rtcb	100	90.891	ENSORLG00020003706	rtcb	100	90.891	Oryzias_latipes_hni
ENSPMAG00000005657	rtcb	100	90.891	ENSORLG00015002968	rtcb	100	90.891	Oryzias_latipes_hsok
ENSPMAG00000005657	rtcb	100	90.495	ENSOMEG00000021278	rtcb	100	90.495	Oryzias_melastigma
ENSPMAG00000005657	rtcb	100	90.891	ENSOGAG00000001425	RTCB	100	90.891	Otolemur_garnettii
ENSPMAG00000005657	rtcb	100	91.683	ENSOARG00000018008	RTCB	100	91.683	Ovis_aries
ENSPMAG00000005657	rtcb	100	91.683	ENSPPAG00000028667	RTCB	100	91.683	Pan_paniscus
ENSPMAG00000005657	rtcb	100	91.683	ENSPPRG00000004038	RTCB	100	91.683	Panthera_pardus
ENSPMAG00000005657	rtcb	94	88.211	ENSPTIG00000020499	RTCB	97	88.421	Panthera_tigris_altaica
ENSPMAG00000005657	rtcb	100	91.683	ENSPTRG00000014287	RTCB	100	91.683	Pan_troglodytes
ENSPMAG00000005657	rtcb	100	91.287	ENSPANG00000016035	RTCB	100	91.287	Papio_anubis
ENSPMAG00000005657	rtcb	100	90.693	ENSPKIG00000001881	rtcb	100	90.693	Paramormyrops_kingsleyae
ENSPMAG00000005657	rtcb	91	92.391	ENSPSIG00000011690	RTCB	100	92.391	Pelodiscus_sinensis
ENSPMAG00000005657	rtcb	100	90.891	ENSPMGG00000016672	rtcb	100	90.891	Periophthalmus_magnuspinnatus
ENSPMAG00000005657	rtcb	100	91.287	ENSPEMG00000019548	Rtcb	100	91.287	Peromyscus_maniculatus_bairdii
ENSPMAG00000005657	rtcb	100	91.287	ENSPCIG00000009467	RTCB	100	91.287	Phascolarctos_cinereus
ENSPMAG00000005657	rtcb	100	91.683	ENSPFOG00000003058	rtcb	100	91.683	Poecilia_formosa
ENSPMAG00000005657	rtcb	100	91.683	ENSPLAG00000017663	rtcb	100	91.683	Poecilia_latipinna
ENSPMAG00000005657	rtcb	100	91.683	ENSPMEG00000006227	rtcb	100	91.683	Poecilia_mexicana
ENSPMAG00000005657	rtcb	100	91.683	ENSPREG00000018467	rtcb	100	91.683	Poecilia_reticulata
ENSPMAG00000005657	rtcb	100	91.683	ENSPPYG00000011752	RTCB	100	91.683	Pongo_abelii
ENSPMAG00000005657	rtcb	93	74.153	ENSPCAG00000013641	RTCB	100	74.153	Procavia_capensis
ENSPMAG00000005657	rtcb	100	91.485	ENSPCOG00000017243	RTCB	100	91.485	Propithecus_coquereli
ENSPMAG00000005657	rtcb	93	90.426	ENSPVAG00000002380	RTCB	100	90.426	Pteropus_vampyrus
ENSPMAG00000005657	rtcb	100	91.089	ENSPNYG00000022760	rtcb	100	91.089	Pundamilia_nyererei
ENSPMAG00000005657	rtcb	100	90.693	ENSPNAG00000009209	rtcb	100	90.693	Pygocentrus_nattereri
ENSPMAG00000005657	rtcb	100	91.287	ENSRNOG00000004813	Rtcb	100	91.287	Rattus_norvegicus
ENSPMAG00000005657	rtcb	100	83.597	ENSRBIG00000042090	RTCB	100	83.597	Rhinopithecus_bieti
ENSPMAG00000005657	rtcb	100	86.931	ENSSBOG00000020085	-	100	86.931	Saimiri_boliviensis_boliviensis
ENSPMAG00000005657	rtcb	94	91.983	ENSSHAG00000016277	RTCB	100	91.983	Sarcophilus_harrisii
ENSPMAG00000005657	rtcb	100	90.099	ENSSFOG00015011572	RTCB	100	90.099	Scleropages_formosus
ENSPMAG00000005657	rtcb	100	89.901	ENSSFOG00015000763	rtcb	100	89.901	Scleropages_formosus
ENSPMAG00000005657	rtcb	100	88.119	ENSSMAG00000005096	rtcb	100	88.119	Scophthalmus_maximus
ENSPMAG00000005657	rtcb	100	91.089	ENSSDUG00000012605	rtcb	100	91.089	Seriola_dumerili
ENSPMAG00000005657	rtcb	100	91.089	ENSSLDG00000019458	rtcb	100	91.089	Seriola_lalandi_dorsalis
ENSPMAG00000005657	rtcb	66	94.286	ENSSARG00000004799	-	70	94.286	Sorex_araneus
ENSPMAG00000005657	rtcb	100	91.287	ENSSPUG00000012814	RTCB	100	91.287	Sphenodon_punctatus
ENSPMAG00000005657	rtcb	100	91.881	ENSSPAG00000004623	rtcb	100	91.881	Stegastes_partitus
ENSPMAG00000005657	rtcb	100	91.683	ENSSSCG00000000158	RTCB	100	91.683	Sus_scrofa
ENSPMAG00000005657	rtcb	100	91.485	ENSTGUG00000010947	RTCB	99	91.485	Taeniopygia_guttata
ENSPMAG00000005657	rtcb	91	92.174	ENSTRUG00000009880	rtcb	100	92.174	Takifugu_rubripes
ENSPMAG00000005657	rtcb	100	90.891	ENSTNIG00000002484	rtcb	100	90.891	Tetraodon_nigroviridis
ENSPMAG00000005657	rtcb	100	79.406	ENSTBEG00000004418	RTCB	100	79.406	Tupaia_belangeri
ENSPMAG00000005657	rtcb	93	91.064	ENSTTRG00000006417	RTCB	100	91.064	Tursiops_truncatus
ENSPMAG00000005657	rtcb	100	91.683	ENSUAMG00000022792	RTCB	100	91.683	Ursus_americanus
ENSPMAG00000005657	rtcb	100	91.683	ENSUMAG00000017225	RTCB	100	91.683	Ursus_maritimus
ENSPMAG00000005657	rtcb	100	91.485	ENSVPAG00000005375	RTCB	100	91.485	Vicugna_pacos
ENSPMAG00000005657	rtcb	100	91.683	ENSVVUG00000023408	RTCB	100	92.138	Vulpes_vulpes
ENSPMAG00000005657	rtcb	100	90.297	ENSXETG00000011523	rtcb	100	90.297	Xenopus_tropicalis
ENSPMAG00000005657	rtcb	100	91.287	ENSXMAG00000002855	rtcb	100	91.287	Xiphophorus_maculatus