EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005838 (Gene tree)
Gene ID: -
Gene Symbol: trmt1l
Alias: -
Full Name: tRNA methyltransferase 1-like
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 17006 bases
Position: chrGL477331:16486-33491
Accession: ZDB-GENE-041014-189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006469	TRM	PF02005.16	7.9e-67	1	2
ENSPMAP00000006469	TRM	PF02005.16	7.9e-67	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006498	-	1872	-	ENSPMAP00000006469	624 (aa)	-	S4RMN3

Gene Model

Click here to download ENSPMAG00000005838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005838	trmt1l	100	58.121	ENSG00000121486	TRMT1L	99	62.963	Homo_sapiens
ENSPMAG00000005838	trmt1l	100	57.210	ENSAPOG00000011807	trmt1l	96	53.736	Acanthochromis_polyacanthus
ENSPMAG00000005838	trmt1l	100	57.278	ENSAMEG00000013538	TRMT1L	84	57.460	Ailuropoda_melanoleuca
ENSPMAG00000005838	trmt1l	80	56.693	ENSACIG00000012049	trmt1l	97	55.859	Amphilophus_citrinellus
ENSPMAG00000005838	trmt1l	100	58.147	ENSAOCG00000018112	trmt1l	96	57.668	Amphiprion_ocellaris
ENSPMAG00000005838	trmt1l	100	57.009	ENSAPEG00000021433	trmt1l	96	56.515	Amphiprion_percula
ENSPMAG00000005838	trmt1l	100	57.344	ENSATEG00000004573	trmt1l	97	58.609	Anabas_testudineus
ENSPMAG00000005838	trmt1l	100	56.938	ENSAPLG00000008394	TRMT1L	87	57.097	Anas_platyrhynchos
ENSPMAG00000005838	trmt1l	100	57.393	ENSACAG00000002342	TRMT1L	85	57.006	Anolis_carolinensis
ENSPMAG00000005838	trmt1l	100	57.484	ENSANAG00000038162	TRMT1L	84	57.325	Aotus_nancymaae
ENSPMAG00000005838	trmt1l	99	57.053	ENSACLG00000021625	trmt1l	90	56.829	Astatotilapia_calliptera
ENSPMAG00000005838	trmt1l	100	58.034	ENSAMXG00000009602	trmt1l	87	57.585	Astyanax_mexicanus
ENSPMAG00000005838	trmt1l	100	57.735	ENSBTAG00000011285	TRMT1L	84	57.827	Bos_taurus
ENSPMAG00000005838	trmt1l	100	57.803	ENSCJAG00000005456	TRMT1L	85	58.121	Callithrix_jacchus
ENSPMAG00000005838	trmt1l	100	57.234	ENSCAFG00000013518	TRMT1L	83	57.484	Canis_familiaris
ENSPMAG00000005838	trmt1l	100	57.234	ENSCAFG00020015640	TRMT1L	84	57.484	Canis_lupus_dingo
ENSPMAG00000005838	trmt1l	100	57.234	ENSCHIG00000016522	TRMT1L	84	57.325	Capra_hircus
ENSPMAG00000005838	trmt1l	100	57.552	ENSTSYG00000010465	TRMT1L	85	57.803	Carlito_syrichta
ENSPMAG00000005838	trmt1l	78	54.918	ENSCAPG00000012562	TRMT1L	80	54.918	Cavia_aperea
ENSPMAG00000005838	trmt1l	100	57.393	ENSCPOG00000001567	TRMT1L	85	57.460	Cavia_porcellus
ENSPMAG00000005838	trmt1l	100	57.325	ENSCCAG00000018699	TRMT1L	84	57.619	Cebus_capucinus
ENSPMAG00000005838	trmt1l	100	57.803	ENSCATG00000043114	TRMT1L	84	58.095	Cercocebus_atys
ENSPMAG00000005838	trmt1l	100	58.188	ENSCLAG00000010801	-	85	58.254	Chinchilla_lanigera
ENSPMAG00000005838	trmt1l	100	44.657	ENSCLAG00000010853	-	82	44.338	Chinchilla_lanigera
ENSPMAG00000005838	trmt1l	100	57.803	ENSCSAG00000012880	TRMT1L	84	58.095	Chlorocebus_sabaeus
ENSPMAG00000005838	trmt1l	56	64.257	ENSCHOG00000011164	TRMT1L	56	64.400	Choloepus_hoffmanni
ENSPMAG00000005838	trmt1l	100	58.439	ENSCPBG00000015694	TRMT1L	87	58.439	Chrysemys_picta_bellii
ENSPMAG00000005838	trmt1l	100	57.962	ENSCANG00000031107	TRMT1L	84	58.254	Colobus_angolensis_palliatus
ENSPMAG00000005838	trmt1l	100	56.349	ENSCGRG00001019297	Trmt1l	85	56.577	Cricetulus_griseus_chok1gshd
ENSPMAG00000005838	trmt1l	100	56.349	ENSCGRG00000005036	Trmt1l	85	56.577	Cricetulus_griseus_crigri
ENSPMAG00000005838	trmt1l	99	58.188	ENSCSEG00000001248	trmt1l	92	57.962	Cynoglossus_semilaevis
ENSPMAG00000005838	trmt1l	99	56.426	ENSCVAG00000012274	trmt1l	91	55.943	Cyprinodon_variegatus
ENSPMAG00000005838	trmt1l	100	57.698	ENSDARG00000042057	trmt1l	93	58.920	Danio_rerio
ENSPMAG00000005838	trmt1l	100	56.778	ENSDNOG00000005239	TRMT1L	84	56.938	Dasypus_novemcinctus
ENSPMAG00000005838	trmt1l	84	58.979	ENSDORG00000003298	Trmt1l	79	58.634	Dipodomys_ordii
ENSPMAG00000005838	trmt1l	77	64.659	ENSETEG00000015895	TRMT1L	64	64.516	Echinops_telfairi
ENSPMAG00000005838	trmt1l	99	53.623	ENSEBUG00000010301	trmt1l	93	54.093	Eptatretus_burgeri
ENSPMAG00000005838	trmt1l	100	55.024	ENSEASG00005005551	TRMT1L	83	54.834	Equus_asinus_asinus
ENSPMAG00000005838	trmt1l	100	57.393	ENSECAG00000020999	TRMT1L	79	57.619	Equus_caballus
ENSPMAG00000005838	trmt1l	88	63.542	ENSEEUG00000014110	TRMT1L	78	63.542	Erinaceus_europaeus
ENSPMAG00000005838	trmt1l	100	58.216	ENSELUG00000020587	trmt1l	88	58.216	Esox_lucius
ENSPMAG00000005838	trmt1l	100	57.668	ENSFCAG00000011285	TRMT1L	85	57.735	Felis_catus
ENSPMAG00000005838	trmt1l	99	57.464	ENSFALG00000003177	TRMT1L	94	57.464	Ficedula_albicollis
ENSPMAG00000005838	trmt1l	100	58.188	ENSFDAG00000008822	TRMT1L	85	58.347	Fukomys_damarensis
ENSPMAG00000005838	trmt1l	83	58.209	ENSFHEG00000014328	trmt1l	97	58.131	Fundulus_heteroclitus
ENSPMAG00000005838	trmt1l	100	57.325	ENSGMOG00000009535	trmt1l	97	57.257	Gadus_morhua
ENSPMAG00000005838	trmt1l	100	57.393	ENSGALG00000033077	TRMT1L	81	57.393	Gallus_gallus
ENSPMAG00000005838	trmt1l	99	56.398	ENSGAFG00000012445	trmt1l	89	56.850	Gambusia_affinis
ENSPMAG00000005838	trmt1l	100	58.320	ENSGACG00000005050	trmt1l	97	57.857	Gasterosteus_aculeatus
ENSPMAG00000005838	trmt1l	100	58.439	ENSGAGG00000007441	TRMT1L	81	58.439	Gopherus_agassizii
ENSPMAG00000005838	trmt1l	100	57.643	ENSGGOG00000011778	TRMT1L	84	57.937	Gorilla_gorilla
ENSPMAG00000005838	trmt1l	99	57.053	ENSHBUG00000000622	trmt1l	95	57.407	Haplochromis_burtoni
ENSPMAG00000005838	trmt1l	100	54.041	ENSHGLG00000003135	-	85	53.968	Heterocephalus_glaber_female
ENSPMAG00000005838	trmt1l	100	45.984	ENSHGLG00000012595	-	89	46.069	Heterocephalus_glaber_female
ENSPMAG00000005838	trmt1l	100	45.984	ENSHGLG00100004569	-	89	46.069	Heterocephalus_glaber_male
ENSPMAG00000005838	trmt1l	100	57.369	ENSHGLG00100019412	-	85	57.302	Heterocephalus_glaber_male
ENSPMAG00000005838	trmt1l	100	57.460	ENSIPUG00000008873	trmt1l	96	57.686	Ictalurus_punctatus
ENSPMAG00000005838	trmt1l	100	58.188	ENSSTOG00000010332	TRMT1L	85	58.121	Ictidomys_tridecemlineatus
ENSPMAG00000005838	trmt1l	100	57.075	ENSJJAG00000010929	Trmt1l	87	57.097	Jaculus_jaculus
ENSPMAG00000005838	trmt1l	100	57.143	ENSKMAG00000010310	trmt1l	90	56.984	Kryptolebias_marmoratus
ENSPMAG00000005838	trmt1l	100	57.143	ENSLBEG00000003487	trmt1l	90	56.897	Labrus_bergylta
ENSPMAG00000005838	trmt1l	92	56.780	ENSLBEG00000007982	-	91	56.514	Labrus_bergylta
ENSPMAG00000005838	trmt1l	100	58.452	ENSLACG00000008447	TRMT1L	92	58.675	Latimeria_chalumnae
ENSPMAG00000005838	trmt1l	100	57.903	ENSLOCG00000001781	trmt1l	88	57.771	Lepisosteus_oculatus
ENSPMAG00000005838	trmt1l	100	58.214	ENSLAFG00000004339	TRMT1L	85	58.095	Loxodonta_africana
ENSPMAG00000005838	trmt1l	100	57.803	ENSMFAG00000037592	TRMT1L	84	58.095	Macaca_fascicularis
ENSPMAG00000005838	trmt1l	100	57.803	ENSMMUG00000013879	TRMT1L	89	58.095	Macaca_mulatta
ENSPMAG00000005838	trmt1l	100	57.803	ENSMNEG00000041637	TRMT1L	84	58.095	Macaca_nemestrina
ENSPMAG00000005838	trmt1l	100	57.803	ENSMLEG00000004840	TRMT1L	84	58.095	Mandrillus_leucophaeus
ENSPMAG00000005838	trmt1l	99	57.464	ENSMAMG00000015305	trmt1l	98	57.395	Mastacembelus_armatus
ENSPMAG00000005838	trmt1l	99	57.053	ENSMZEG00005017822	trmt1l	90	56.829	Maylandia_zebra
ENSPMAG00000005838	trmt1l	100	57.234	ENSMGAG00000000930	TRMT1L	94	57.234	Meleagris_gallopavo
ENSPMAG00000005838	trmt1l	100	54.245	ENSMAUG00000019870	Trmt1l	86	54.403	Mesocricetus_auratus
ENSPMAG00000005838	trmt1l	100	57.711	ENSMICG00000009494	TRMT1L	84	57.643	Microcebus_murinus
ENSPMAG00000005838	trmt1l	100	56.390	ENSMOCG00000016453	Trmt1l	85	56.550	Microtus_ochrogaster
ENSPMAG00000005838	trmt1l	99	55.079	ENSMMOG00000016961	trmt1l	97	55.079	Mola_mola
ENSPMAG00000005838	trmt1l	99	59.968	ENSMODG00000007454	TRMT1L	71	59.968	Monodelphis_domestica
ENSPMAG00000005838	trmt1l	99	55.937	ENSMALG00000019306	trmt1l	89	56.250	Monopterus_albus
ENSPMAG00000005838	trmt1l	100	56.459	MGP_CAROLIEiJ_G0014693	Trmt1l	85	56.916	Mus_caroli
ENSPMAG00000005838	trmt1l	100	56.300	ENSMUSG00000053286	Trmt1l	85	56.757	Mus_musculus
ENSPMAG00000005838	trmt1l	100	55.821	MGP_PahariEiJ_G0027929	Trmt1l	84	56.280	Mus_pahari
ENSPMAG00000005838	trmt1l	84	57.343	MGP_SPRETEiJ_G0015500	Trmt1l	82	58.005	Mus_spretus
ENSPMAG00000005838	trmt1l	100	53.968	ENSMPUG00000011859	TRMT1L	85	54.041	Mustela_putorius_furo
ENSPMAG00000005838	trmt1l	100	58.029	ENSMLUG00000001136	TRMT1L	86	57.962	Myotis_lucifugus
ENSPMAG00000005838	trmt1l	100	57.097	ENSNGAG00000011685	Trmt1l	85	57.552	Nannospalax_galili
ENSPMAG00000005838	trmt1l	77	57.438	ENSNBRG00000004053	trmt1l	91	62.238	Neolamprologus_brichardi
ENSPMAG00000005838	trmt1l	100	57.962	ENSNLEG00000018030	TRMT1L	84	58.254	Nomascus_leucogenys
ENSPMAG00000005838	trmt1l	84	58.333	ENSMEUG00000011344	TRMT1L	76	58.333	Notamacropus_eugenii
ENSPMAG00000005838	trmt1l	88	57.713	ENSOPRG00000000680	TRMT1L	83	57.866	Ochotona_princeps
ENSPMAG00000005838	trmt1l	100	54.690	ENSODEG00000000826	TRMT1L	85	55.079	Octodon_degus
ENSPMAG00000005838	trmt1l	99	57.795	ENSONIG00000007823	trmt1l	99	57.571	Oreochromis_niloticus
ENSPMAG00000005838	trmt1l	99	58.080	ENSOANG00000001010	TRMT1L	94	58.240	Ornithorhynchus_anatinus
ENSPMAG00000005838	trmt1l	100	58.214	ENSOCUG00000004896	TRMT1L	87	58.373	Oryctolagus_cuniculus
ENSPMAG00000005838	trmt1l	99	57.188	ENSORLG00000029610	trmt1l	95	58.598	Oryzias_latipes
ENSPMAG00000005838	trmt1l	99	57.030	ENSORLG00020002203	trmt1l	89	56.962	Oryzias_latipes_hni
ENSPMAG00000005838	trmt1l	99	57.030	ENSORLG00015021512	trmt1l	89	56.962	Oryzias_latipes_hsok
ENSPMAG00000005838	trmt1l	94	55.019	ENSOMEG00000016275	trmt1l	86	54.935	Oryzias_melastigma
ENSPMAG00000005838	trmt1l	100	52.556	ENSOGAG00000016186	TRMT1L	95	52.320	Otolemur_garnettii
ENSPMAG00000005838	trmt1l	100	57.393	ENSOARG00000003786	TRMT1L	84	57.484	Ovis_aries
ENSPMAG00000005838	trmt1l	100	57.962	ENSPPAG00000029141	TRMT1L	84	58.254	Pan_paniscus
ENSPMAG00000005838	trmt1l	100	57.668	ENSPPRG00000023981	TRMT1L	85	57.735	Panthera_pardus
ENSPMAG00000005838	trmt1l	100	57.668	ENSPTIG00000021754	TRMT1L	85	57.735	Panthera_tigris_altaica
ENSPMAG00000005838	trmt1l	100	57.962	ENSPTRG00000001776	TRMT1L	84	58.254	Pan_troglodytes
ENSPMAG00000005838	trmt1l	100	56.529	ENSPANG00000020890	TRMT1L	84	56.825	Papio_anubis
ENSPMAG00000005838	trmt1l	100	56.454	ENSPKIG00000005941	trmt1l	88	56.740	Paramormyrops_kingsleyae
ENSPMAG00000005838	trmt1l	99	58.214	ENSPSIG00000010011	TRMT1L	91	58.054	Pelodiscus_sinensis
ENSPMAG00000005838	trmt1l	87	57.857	ENSPMGG00000021359	trmt1l	94	58.140	Periophthalmus_magnuspinnatus
ENSPMAG00000005838	trmt1l	100	56.529	ENSPEMG00000000031	Trmt1l	85	56.757	Peromyscus_maniculatus_bairdii
ENSPMAG00000005838	trmt1l	100	59.459	ENSPCIG00000002409	TRMT1L	83	59.459	Phascolarctos_cinereus
ENSPMAG00000005838	trmt1l	99	56.182	ENSPFOG00000003872	trmt1l	97	56.113	Poecilia_formosa
ENSPMAG00000005838	trmt1l	99	55.643	ENSPLAG00000010387	trmt1l	89	55.573	Poecilia_latipinna
ENSPMAG00000005838	trmt1l	99	55.799	ENSPMEG00000011828	trmt1l	97	57.119	Poecilia_mexicana
ENSPMAG00000005838	trmt1l	99	55.172	ENSPREG00000002866	trmt1l	89	55.102	Poecilia_reticulata
ENSPMAG00000005838	trmt1l	100	58.029	ENSPPYG00000000416	TRMT1L	84	58.254	Pongo_abelii
ENSPMAG00000005838	trmt1l	88	61.002	ENSPCAG00000008257	TRMT1L	73	61.002	Procavia_capensis
ENSPMAG00000005838	trmt1l	83	48.503	ENSPCOG00000005682	TRMT1L	76	48.503	Propithecus_coquereli
ENSPMAG00000005838	trmt1l	85	59.302	ENSPVAG00000005961	TRMT1L	72	59.302	Pteropus_vampyrus
ENSPMAG00000005838	trmt1l	99	56.220	ENSPNYG00000005607	trmt1l	95	57.576	Pundamilia_nyererei
ENSPMAG00000005838	trmt1l	100	58.450	ENSPNAG00000004389	trmt1l	87	58.464	Pygocentrus_nattereri
ENSPMAG00000005838	trmt1l	100	57.302	ENSRNOG00000002580	Trmt1l	85	57.302	Rattus_norvegicus
ENSPMAG00000005838	trmt1l	100	57.962	ENSRBIG00000042589	TRMT1L	84	58.254	Rhinopithecus_bieti
ENSPMAG00000005838	trmt1l	100	57.962	ENSRROG00000032183	TRMT1L	84	58.254	Rhinopithecus_roxellana
ENSPMAG00000005838	trmt1l	100	57.508	ENSSBOG00000029282	TRMT1L	84	57.166	Saimiri_boliviensis_boliviensis
ENSPMAG00000005838	trmt1l	100	56.940	ENSSFOG00015004878	trmt1l	88	56.714	Scleropages_formosus
ENSPMAG00000005838	trmt1l	71	59.184	ENSSMAG00000015425	trmt1l	95	59.184	Scophthalmus_maximus
ENSPMAG00000005838	trmt1l	100	57.500	ENSSDUG00000021807	trmt1l	97	58.416	Seriola_dumerili
ENSPMAG00000005838	trmt1l	100	55.329	ENSSLDG00000016579	trmt1l	97	58.251	Seriola_lalandi_dorsalis
ENSPMAG00000005838	trmt1l	73	59.091	ENSSARG00000010135	TRMT1L	81	60.287	Sorex_araneus
ENSPMAG00000005838	trmt1l	95	59.564	ENSSPUG00000003927	TRMT1L	95	59.160	Sphenodon_punctatus
ENSPMAG00000005838	trmt1l	100	57.300	ENSSPAG00000008597	trmt1l	89	57.009	Stegastes_partitus
ENSPMAG00000005838	trmt1l	100	57.668	ENSSSCG00000021393	TRMT1L	80	57.735	Sus_scrofa
ENSPMAG00000005838	trmt1l	99	57.348	ENSTGUG00000003737	TRMT1L	92	57.508	Taeniopygia_guttata
ENSPMAG00000005838	trmt1l	99	55.625	ENSTRUG00000002396	trmt1l	97	50.645	Takifugu_rubripes
ENSPMAG00000005838	trmt1l	68	61.379	ENSTNIG00000005534	trmt1l	99	61.982	Tetraodon_nigroviridis
ENSPMAG00000005838	trmt1l	83	58.405	ENSTBEG00000016498	TRMT1L	72	58.496	Tupaia_belangeri
ENSPMAG00000005838	trmt1l	100	56.240	ENSTTRG00000005892	TRMT1L	84	56.349	Tursiops_truncatus
ENSPMAG00000005838	trmt1l	100	57.278	ENSUAMG00000020936	TRMT1L	84	57.460	Ursus_americanus
ENSPMAG00000005838	trmt1l	100	57.278	ENSUMAG00000021919	TRMT1L	83	57.460	Ursus_maritimus
ENSPMAG00000005838	trmt1l	100	57.962	ENSVPAG00000011854	TRMT1L	94	58.121	Vicugna_pacos
ENSPMAG00000005838	trmt1l	100	57.234	ENSVVUG00000009166	TRMT1L	84	57.484	Vulpes_vulpes
ENSPMAG00000005838	trmt1l	83	55.212	ENSXETG00000004539	trmt1l	95	55.985	Xenopus_tropicalis
ENSPMAG00000005838	trmt1l	94	58.404	ENSXCOG00000007372	trmt1l	90	58.333	Xiphophorus_couchianus
ENSPMAG00000005838	trmt1l	99	55.730	ENSXMAG00000003575	trmt1l	97	56.543	Xiphophorus_maculatus