EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPMAG00000005914 (Gene tree)
Gene ID: -
Gene Symbol: cwc22
Alias: -
Full Name: CWC22 spliceosome-associated protein homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Minus strand
Length: 92056 bases
Position: chrGL476539:231915-323970
Accession: ZDB-GENE-060929-452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006541	MA3	PF02847.17	1.6e-23	1	1
ENSPMAP00000006531	MA3	PF02847.17	1.8e-23	1	1
ENSPMAP00000006551	MA3	PF02847.17	2.9e-19	1	1
ENSPMAP00000006541	MIF4G	PF02854.19	9.1e-15	1	1
ENSPMAP00000006531	MIF4G	PF02854.19	9.2e-15	1	1
ENSPMAP00000006551	MIF4G	PF02854.19	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006560	-	2649	-	ENSPMAP00000006531	883 (aa)	-	S4RMU5
ENSPMAT00000006570	-	2565	-	ENSPMAP00000006541	855 (aa)	-	S4RMV5
ENSPMAT00000006580	-	2592	-	ENSPMAP00000006551	864 (aa)	-	S4RMW5

Gene Model

Click here to download ENSPMAG00000005914's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005914's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPMAG00000005914	cwc22	89	60.964	ENSG00000163510	CWC22	83	74.367	Homo_sapiens
ENSPMAG00000005914	cwc22	66	78.546	ENSAPOG00000004200	cwc22	84	70.988	Acanthochromis_polyacanthus
ENSPMAG00000005914	cwc22	89	61.669	ENSAMEG00000011004	CWC22	91	60.241	Ailuropoda_melanoleuca
ENSPMAG00000005914	cwc22	71	78.275	ENSACIG00000020055	cwc22	87	64.051	Amphilophus_citrinellus
ENSPMAG00000005914	cwc22	72	74.513	ENSAPEG00000002673	cwc22	75	66.367	Amphiprion_percula
ENSPMAG00000005914	cwc22	68	78.216	ENSATEG00000005176	cwc22	72	71.326	Anabas_testudineus
ENSPMAG00000005914	cwc22	67	78.634	ENSACAG00000009438	CWC22	87	62.421	Anolis_carolinensis
ENSPMAG00000005914	cwc22	94	64.728	ENSANAG00000028324	CWC22	91	60.922	Aotus_nancymaae
ENSPMAG00000005914	cwc22	68	78.632	ENSACLG00000025447	cwc22	94	72.086	Astatotilapia_calliptera
ENSPMAG00000005914	cwc22	52	85.135	ENSAMXG00000014957	cwc22	64	84.305	Astyanax_mexicanus
ENSPMAG00000005914	cwc22	96	63.745	ENSBTAG00000021726	CWC22	91	60.650	Bos_taurus
ENSPMAG00000005914	cwc22	63	53.663	WBGene00002957	let-858	86	44.030	Caenorhabditis_elegans
ENSPMAG00000005914	cwc22	89	61.306	ENSCAFG00000014160	CWC22	91	60.264	Canis_familiaris
ENSPMAG00000005914	cwc22	89	61.481	ENSCAFG00020007223	CWC22	87	70.235	Canis_lupus_dingo
ENSPMAG00000005914	cwc22	94	64.329	ENSCHIG00000017150	CWC22	91	60.024	Capra_hircus
ENSPMAG00000005914	cwc22	95	57.664	ENSTSYG00000028686	-	91	56.066	Carlito_syrichta
ENSPMAG00000005914	cwc22	89	58.032	ENSTSYG00000035591	-	92	56.833	Carlito_syrichta
ENSPMAG00000005914	cwc22	94	65.019	ENSTSYG00000000218	-	91	60.838	Carlito_syrichta
ENSPMAG00000005914	cwc22	95	56.987	ENSTSYG00000026635	-	84	58.243	Carlito_syrichta
ENSPMAG00000005914	cwc22	87	58.994	ENSCAPG00000002064	CWC22	92	58.625	Cavia_aperea
ENSPMAG00000005914	cwc22	88	63.568	ENSCPOG00000007492	CWC22	87	62.500	Cavia_porcellus
ENSPMAG00000005914	cwc22	94	61.166	ENSCCAG00000021239	CWC22	68	69.268	Cebus_capucinus
ENSPMAG00000005914	cwc22	94	64.895	ENSCATG00000035788	CWC22	91	59.881	Cercocebus_atys
ENSPMAG00000005914	cwc22	65	81.688	ENSCLAG00000011118	CWC22	87	63.590	Chinchilla_lanigera
ENSPMAG00000005914	cwc22	96	63.966	ENSCSAG00000012925	CWC22	91	59.976	Chlorocebus_sabaeus
ENSPMAG00000005914	cwc22	67	70.906	ENSCHOG00000006362	CWC22	64	70.191	Choloepus_hoffmanni
ENSPMAG00000005914	cwc22	97	57.662	ENSCPBG00000001765	CWC22	88	61.111	Chrysemys_picta_bellii
ENSPMAG00000005914	cwc22	68	65.292	ENSCING00000008865	-	92	53.958	Ciona_intestinalis
ENSPMAG00000005914	cwc22	63	67.766	ENSCSAVG00000003537	-	80	73.810	Ciona_savignyi
ENSPMAG00000005914	cwc22	94	65.255	ENSCANG00000013762	CWC22	91	60.072	Colobus_angolensis_palliatus
ENSPMAG00000005914	cwc22	91	61.473	ENSCGRG00001017005	-	80	79.723	Cricetulus_griseus_chok1gshd
ENSPMAG00000005914	cwc22	91	61.473	ENSCGRG00000001934	-	91	61.768	Cricetulus_griseus_crigri
ENSPMAG00000005914	cwc22	74	63.382	ENSCSEG00000005257	cwc22	85	60.000	Cynoglossus_semilaevis
ENSPMAG00000005914	cwc22	67	79.688	ENSCVAG00000009836	cwc22	75	64.798	Cyprinodon_variegatus
ENSPMAG00000005914	cwc22	68	80.656	ENSDARG00000014008	cwc22	77	64.250	Danio_rerio
ENSPMAG00000005914	cwc22	70	60.465	ENSDNOG00000032640	-	87	58.280	Dasypus_novemcinctus
ENSPMAG00000005914	cwc22	94	65.351	ENSDNOG00000003020	-	63	79.203	Dasypus_novemcinctus
ENSPMAG00000005914	cwc22	65	81.574	ENSDORG00000011483	-	63	79.203	Dipodomys_ordii
ENSPMAG00000005914	cwc22	65	70.304	ENSETEG00000013355	CWC22	87	62.693	Echinops_telfairi
ENSPMAG00000005914	cwc22	98	63.679	ENSEASG00005022287	CWC22	90	60.822	Equus_asinus_asinus
ENSPMAG00000005914	cwc22	94	65.428	ENSECAG00000010769	CWC22	90	61.192	Equus_caballus
ENSPMAG00000005914	cwc22	59	82.587	ENSEEUG00000005336	CWC22	55	77.256	Erinaceus_europaeus
ENSPMAG00000005914	cwc22	90	64.390	ENSELUG00000010536	cwc22	91	76.801	Esox_lucius
ENSPMAG00000005914	cwc22	96	64.372	ENSFCAG00000018982	CWC22	90	61.031	Felis_catus
ENSPMAG00000005914	cwc22	70	77.741	ENSFALG00000003495	CWC22	89	61.665	Ficedula_albicollis
ENSPMAG00000005914	cwc22	68	79.002	ENSFDAG00000010857	CWC22	89	62.283	Fukomys_damarensis
ENSPMAG00000005914	cwc22	64	80.692	ENSFHEG00000009620	cwc22	78	69.942	Fundulus_heteroclitus
ENSPMAG00000005914	cwc22	70	77.612	ENSGMOG00000009084	cwc22	96	74.794	Gadus_morhua
ENSPMAG00000005914	cwc22	92	60.694	ENSGALG00000009001	CWC22	90	61.198	Gallus_gallus
ENSPMAG00000005914	cwc22	65	80.616	ENSGAFG00000021155	cwc22	88	66.804	Gambusia_affinis
ENSPMAG00000005914	cwc22	68	79.316	ENSGACG00000002071	cwc22	96	63.235	Gasterosteus_aculeatus
ENSPMAG00000005914	cwc22	97	62.102	ENSGAGG00000013471	CWC22	64	78.374	Gopherus_agassizii
ENSPMAG00000005914	cwc22	94	64.524	ENSGGOG00000012484	CWC22	91	60.719	Gorilla_gorilla
ENSPMAG00000005914	cwc22	70	75.879	ENSHBUG00000010504	cwc22	86	63.294	Haplochromis_burtoni
ENSPMAG00000005914	cwc22	90	61.200	ENSHGLG00000005692	CWC22	89	61.757	Heterocephalus_glaber_female
ENSPMAG00000005914	cwc22	90	61.200	ENSHGLG00100016497	CWC22	88	73.701	Heterocephalus_glaber_male
ENSPMAG00000005914	cwc22	78	78.510	ENSHCOG00000004206	cwc22	80	68.428	Hippocampus_comes
ENSPMAG00000005914	cwc22	68	76.254	ENSIPUG00000005831	cwc22	68	71.692	Ictalurus_punctatus
ENSPMAG00000005914	cwc22	94	64.845	ENSSTOG00000009788	CWC22	91	59.952	Ictidomys_tridecemlineatus
ENSPMAG00000005914	cwc22	68	78.974	ENSJJAG00000017012	-	91	61.679	Jaculus_jaculus
ENSPMAG00000005914	cwc22	69	77.740	ENSKMAG00000005228	cwc22	79	63.892	Kryptolebias_marmoratus
ENSPMAG00000005914	cwc22	68	79.862	ENSLBEG00000020518	cwc22	71	74.167	Labrus_bergylta
ENSPMAG00000005914	cwc22	68	74.957	ENSLACG00000005916	CWC22	51	74.913	Latimeria_chalumnae
ENSPMAG00000005914	cwc22	68	78.793	ENSLOCG00000006456	cwc22	79	63.232	Lepisosteus_oculatus
ENSPMAG00000005914	cwc22	94	64.908	ENSLAFG00000014802	CWC22	63	78.720	Loxodonta_africana
ENSPMAG00000005914	cwc22	94	65.012	ENSMFAG00000000590	CWC22	91	60.000	Macaca_fascicularis
ENSPMAG00000005914	cwc22	94	64.648	ENSMMUG00000020642	CWC22	95	60.000	Macaca_mulatta
ENSPMAG00000005914	cwc22	94	65.012	ENSMNEG00000034567	CWC22	91	60.119	Macaca_nemestrina
ENSPMAG00000005914	cwc22	94	65.012	ENSMLEG00000042344	CWC22	91	60.000	Mandrillus_leucophaeus
ENSPMAG00000005914	cwc22	70	77.575	ENSMAMG00000018888	cwc22	80	63.613	Mastacembelus_armatus
ENSPMAG00000005914	cwc22	68	78.632	ENSMZEG00005021449	cwc22	76	69.129	Maylandia_zebra
ENSPMAG00000005914	cwc22	92	59.977	ENSMGAG00000009220	CWC22	82	63.479	Meleagris_gallopavo
ENSPMAG00000005914	cwc22	79	59.422	ENSMAUG00000016154	-	95	60.635	Mesocricetus_auratus
ENSPMAG00000005914	cwc22	94	64.348	ENSMICG00000016919	CWC22	65	79.066	Microcebus_murinus
ENSPMAG00000005914	cwc22	66	73.989	ENSMMOG00000019720	cwc22	93	68.364	Mola_mola
ENSPMAG00000005914	cwc22	63	76.667	ENSMODG00000020117	-	97	77.170	Monodelphis_domestica
ENSPMAG00000005914	cwc22	63	76.481	ENSMODG00000003711	-	97	76.981	Monodelphis_domestica
ENSPMAG00000005914	cwc22	89	61.594	ENSMODG00000010233	-	86	64.076	Monodelphis_domestica
ENSPMAG00000005914	cwc22	93	66.874	MGP_CAROLIEiJ_G0023696	-	84	73.927	Mus_caroli
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000095824	Gm13697	88	68.630	Mus_musculus
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000096484	Gm13696	88	68.630	Mus_musculus
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000094125	Gm13698	88	68.630	Mus_musculus
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000096729	Gm13695	88	68.493	Mus_musculus
ENSPMAG00000005914	cwc22	96	65.815	ENSMUSG00000027014	Cwc22	81	78.741	Mus_musculus
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000094336	Gm13693	88	68.630	Mus_musculus
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000079247	Gm13691	88	68.630	Mus_musculus
ENSPMAG00000005914	cwc22	86	68.407	ENSMUSG00000096337	Gm13694	88	68.630	Mus_musculus
ENSPMAG00000005914	cwc22	95	65.700	MGP_PahariEiJ_G0025147	-	78	80.174	Mus_pahari
ENSPMAG00000005914	cwc22	67	79.896	ENSMPUG00000002432	CWC22	64	79.412	Mustela_putorius_furo
ENSPMAG00000005914	cwc22	69	76.628	ENSMLUG00000024966	-	78	71.987	Myotis_lucifugus
ENSPMAG00000005914	cwc22	88	61.899	ENSMLUG00000013437	-	95	61.282	Myotis_lucifugus
ENSPMAG00000005914	cwc22	93	59.352	ENSNGAG00000013881	-	78	80.039	Nannospalax_galili
ENSPMAG00000005914	cwc22	96	63.889	ENSNLEG00000006248	CWC22	91	61.427	Nomascus_leucogenys
ENSPMAG00000005914	cwc22	67	71.972	ENSMEUG00000011026	CWC22	99	73.477	Notamacropus_eugenii
ENSPMAG00000005914	cwc22	55	81.316	ENSOPRG00000007844	CWC22	57	80.942	Ochotona_princeps
ENSPMAG00000005914	cwc22	55	76.008	ENSODEG00000005934	-	71	77.201	Octodon_degus
ENSPMAG00000005914	cwc22	60	80.194	ENSODEG00000007673	CWC22	82	80.431	Octodon_degus
ENSPMAG00000005914	cwc22	90	64.586	ENSOANG00000008649	CWC22	98	62.929	Ornithorhynchus_anatinus
ENSPMAG00000005914	cwc22	69	76.705	ENSORLG00000010538	cwc22	69	72.265	Oryzias_latipes
ENSPMAG00000005914	cwc22	75	76.705	ENSORLG00020015117	cwc22	76	65.319	Oryzias_latipes_hni
ENSPMAG00000005914	cwc22	77	81.056	ENSORLG00015018073	cwc22	83	64.975	Oryzias_latipes_hsok
ENSPMAG00000005914	cwc22	71	78.305	ENSOMEG00000015199	cwc22	79	65.405	Oryzias_melastigma
ENSPMAG00000005914	cwc22	91	61.271	ENSOGAG00000015287	CWC22	91	60.240	Otolemur_garnettii
ENSPMAG00000005914	cwc22	94	64.087	ENSOARG00000016905	CWC22	91	60.024	Ovis_aries
ENSPMAG00000005914	cwc22	94	64.640	ENSPPAG00000027833	CWC22	91	59.786	Pan_paniscus
ENSPMAG00000005914	cwc22	96	64.251	ENSPPRG00000001389	CWC22	90	60.624	Panthera_pardus
ENSPMAG00000005914	cwc22	91	73.802	ENSPTIG00000019139	CWC22	90	60.120	Panthera_tigris_altaica
ENSPMAG00000005914	cwc22	94	64.524	ENSPTRG00000012698	CWC22	91	60.095	Pan_troglodytes
ENSPMAG00000005914	cwc22	86	73.642	ENSPANG00000018976	CWC22	91	60.215	Papio_anubis
ENSPMAG00000005914	cwc22	97	75.207	ENSPKIG00000021346	cwc22	71	73.539	Paramormyrops_kingsleyae
ENSPMAG00000005914	cwc22	69	76.421	ENSPSIG00000008632	CWC22	88	60.973	Pelodiscus_sinensis
ENSPMAG00000005914	cwc22	67	74.132	ENSPMGG00000020129	cwc22	75	65.812	Periophthalmus_magnuspinnatus
ENSPMAG00000005914	cwc22	69	75.712	ENSPEMG00000023936	-	83	76.166	Peromyscus_maniculatus_bairdii
ENSPMAG00000005914	cwc22	67	79.965	ENSPCIG00000009903	-	80	79.376	Phascolarctos_cinereus
ENSPMAG00000005914	cwc22	72	76.801	ENSPFOG00000015025	cwc22	94	68.333	Poecilia_formosa
ENSPMAG00000005914	cwc22	66	80.749	ENSPLAG00000021405	cwc22	82	63.659	Poecilia_latipinna
ENSPMAG00000005914	cwc22	66	80.570	ENSPMEG00000007850	cwc22	83	63.659	Poecilia_mexicana
ENSPMAG00000005914	cwc22	73	74.221	ENSPREG00000004312	cwc22	83	64.183	Poecilia_reticulata
ENSPMAG00000005914	cwc22	96	63.845	ENSPPYG00000012986	CWC22	91	60.048	Pongo_abelii
ENSPMAG00000005914	cwc22	68	77.835	ENSPCAG00000011882	CWC22	62	80.470	Procavia_capensis
ENSPMAG00000005914	cwc22	80	81.395	ENSPCOG00000010195	CWC22	60	79.703	Propithecus_coquereli
ENSPMAG00000005914	cwc22	94	64.982	ENSPVAG00000011497	CWC22	91	60.958	Pteropus_vampyrus
ENSPMAG00000005914	cwc22	68	75.726	ENSPNYG00000010435	cwc22	94	69.632	Pundamilia_nyererei
ENSPMAG00000005914	cwc22	91	64.713	ENSRNOG00000012651	Cwc22	91	64.662	Rattus_norvegicus
ENSPMAG00000005914	cwc22	96	61.882	ENSRNOG00000038322	LOC500684	91	64.241	Rattus_norvegicus
ENSPMAG00000005914	cwc22	94	61.548	ENSRBIG00000036751	CWC22	91	57.669	Rhinopithecus_bieti
ENSPMAG00000005914	cwc22	94	64.895	ENSRROG00000037520	CWC22	91	60.000	Rhinopithecus_roxellana
ENSPMAG00000005914	cwc22	94	62.670	ENSSBOG00000021683	CWC22	63	76.216	Saimiri_boliviensis_boliviensis
ENSPMAG00000005914	cwc22	70	66.945	ENSSHAG00000004040	-	85	64.812	Sarcophilus_harrisii
ENSPMAG00000005914	cwc22	95	64.485	ENSSHAG00000016596	-	93	61.697	Sarcophilus_harrisii
ENSPMAG00000005914	cwc22	60	80.507	ENSSFOG00015010559	cwc22	84	61.202	Scleropages_formosus
ENSPMAG00000005914	cwc22	69	76.223	ENSSMAG00000004724	cwc22	67	69.857	Scophthalmus_maximus
ENSPMAG00000005914	cwc22	69	78.328	ENSSDUG00000010656	cwc22	77	65.057	Seriola_dumerili
ENSPMAG00000005914	cwc22	66	80.427	ENSSLDG00000023157	cwc22	91	73.791	Seriola_lalandi_dorsalis
ENSPMAG00000005914	cwc22	98	59.555	ENSSPUG00000006395	CWC22	63	76.710	Sphenodon_punctatus
ENSPMAG00000005914	cwc22	68	79.145	ENSSPAG00000008746	cwc22	78	65.491	Stegastes_partitus
ENSPMAG00000005914	cwc22	99	63.860	ENSSSCG00000016008	CWC22	91	60.796	Sus_scrofa
ENSPMAG00000005914	cwc22	70	78.037	ENSTGUG00000009340	-	88	61.941	Taeniopygia_guttata
ENSPMAG00000005914	cwc22	70	76.898	ENSTRUG00000014411	cwc22	77	65.424	Takifugu_rubripes
ENSPMAG00000005914	cwc22	65	78.131	ENSTNIG00000005074	cwc22	83	69.109	Tetraodon_nigroviridis
ENSPMAG00000005914	cwc22	98	51.402	ENSTBEG00000014539	CWC22	79	63.139	Tupaia_belangeri
ENSPMAG00000005914	cwc22	96	63.636	ENSTTRG00000012142	CWC22	88	60.907	Tursiops_truncatus
ENSPMAG00000005914	cwc22	89	61.863	ENSUAMG00000010342	CWC22	91	60.396	Ursus_americanus
ENSPMAG00000005914	cwc22	89	61.427	ENSUMAG00000016730	CWC22	90	60.361	Ursus_maritimus
ENSPMAG00000005914	cwc22	75	75.723	ENSVPAG00000008565	CWC22	63	78.547	Vicugna_pacos
ENSPMAG00000005914	cwc22	89	61.306	ENSVVUG00000009738	CWC22	91	60.264	Vulpes_vulpes
ENSPMAG00000005914	cwc22	65	80.832	ENSXETG00000014099	cwc22	78	74.468	Xenopus_tropicalis
ENSPMAG00000005914	cwc22	66	80.570	ENSXMAG00000013201	cwc22	76	65.229	Xiphophorus_maculatus