EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSPMAG00000005938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Petromyzon_marinus
Status: putative
Strand: Plus strand
Length: 560 bases
Position: chrGL495441:238-797
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPMAP00000006543	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPMAT00000006572	-	477	-	ENSPMAP00000006543	158 (aa)	-	S4RMV7

Gene Model

Click here to download ENSPMAG00000005938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPMAG00000005938's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPMAG00000005938	-	89	31.126	ENSPMAG00000006671	si:cabz01085950.1	74	31.126
ENSPMAG00000005938	-	100	43.114	ENSPMAG00000006105	rab30	78	43.114
ENSPMAG00000005938	-	99	49.091	ENSPMAG00000002006	-	76	49.091
ENSPMAG00000005938	-	97	40.741	ENSPMAG00000007867	rab5c	76	40.741
ENSPMAG00000005938	-	96	46.584	ENSPMAG00000009335	-	77	46.584
ENSPMAG00000005938	-	97	30.909	ENSPMAG00000004657	rab36	68	30.909
ENSPMAG00000005938	-	92	38.323	ENSPMAG00000005537	rab27a	74	38.323
ENSPMAG00000005938	-	97	32.530	ENSPMAG00000004548	hrasb	83	32.530
ENSPMAG00000005938	-	99	46.061	ENSPMAG00000001801	rab1ba	80	46.061
ENSPMAG00000005938	-	97	39.645	ENSPMAG00000007247	rab33ba	69	39.645
ENSPMAG00000005938	-	99	56.364	ENSPMAG00000006171	-	77	56.364
ENSPMAG00000005938	-	92	42.308	ENSPMAG00000005322	rab18b	74	42.308
ENSPMAG00000005938	-	68	32.143	ENSPMAG00000004439	rab20	53	32.743
ENSPMAG00000005938	-	99	54.545	ENSPMAG00000008764	RAB2B	89	54.545
ENSPMAG00000005938	-	97	41.818	ENSPMAG00000001399	rab5c	77	41.818
ENSPMAG00000005938	-	97	38.889	ENSPMAG00000001403	-	80	38.889
ENSPMAG00000005938	-	97	40.123	ENSPMAG00000000008	rab5c	74	40.123